Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	set02_ATM_minus_versus_BT_ATM_minus
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$SRF_Q6
Enrichment Score (ES)	-0.398249
Normalized Enrichment Score (NES)	-1.7974662
Nominal p-value	0.0
FDR q-value	0.016440844
FWER p-Value	0.133

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MATR3	55	3.775	0.0111	No
2	CHD6	116	3.310	0.0204	No
3	EML4	147	3.169	0.0305	No
4	MAP2K6	175	2.990	0.0400	No
5	ACTB	198	2.933	0.0497	No
6	HERC1	202	2.907	0.0600	No
7	RHOJ	259	2.699	0.0672	No
8	H3F3A	403	2.420	0.0694	No
9	TCF8	411	2.409	0.0778	No
10	LPP	532	2.236	0.0804	No
11	ASPH	674	2.084	0.0815	No
12	RASD2	823	1.939	0.0817	No
13	ROCK2	935	1.861	0.0833	No
14	ADAMTS12	1027	1.800	0.0857	No
15	PICALM	1210	1.703	0.0835	No
16	MBNL1	1213	1.702	0.0895	No
17	TAZ	1276	1.668	0.0927	No
18	FST	1383	1.611	0.0937	No
19	FOXP1	1454	1.579	0.0962	No
20	ATP1A2	1622	1.510	0.0940	No
21	CFL2	1742	1.467	0.0938	No
22	PPAP2B	1860	1.410	0.0935	No
23	EMILIN2	2173	1.304	0.0839	No
24	DIXDC1	2245	1.277	0.0853	No
25	SCN3B	2743	1.140	0.0665	No
26	ELAVL4	2952	1.095	0.0609	No
27	LDB3	3018	1.077	0.0619	No
28	SYNCRIP	3238	1.028	0.0555	No
29	SCOC	3287	1.015	0.0570	No
30	RARB	3291	1.014	0.0605	No
31	ABL1	3313	1.010	0.0632	No
32	PPP1R12A	3345	1.003	0.0654	No
33	IGF1	3560	0.957	0.0590	No
34	PRM1	3629	0.943	0.0593	No
35	SRD5A2	3744	0.919	0.0574	No
36	SDPR	3835	0.903	0.0566	No
37	COL1A1	4020	0.869	0.0512	No
38	ITGB1BP2	4185	0.841	0.0467	No
39	NOL4	4345	0.814	0.0424	No
40	PRKAB2	4374	0.807	0.0440	No
41	PODN	4576	0.774	0.0376	No
42	MRGPRF	4683	0.759	0.0354	No
43	RAB27A	4851	0.732	0.0304	No
44	TNMD	4889	0.727	0.0313	No
45	UBE2D3	4979	0.711	0.0298	No
46	RIMS1	5039	0.702	0.0297	No
47	RRM1	5103	0.695	0.0293	No
48	NPR3	5157	0.687	0.0293	No
49	TGFB1I1	5422	0.645	0.0195	No
50	DMPK	5461	0.640	0.0201	No
51	TRIM46	5535	0.630	0.0190	No
52	HOXB4	5849	0.581	0.0067	No
53	PDLIM4	6233	0.522	-0.0090	No
54	KCNK3	6250	0.519	-0.0078	No
55	NFATC4	6716	0.458	-0.0276	No
56	PPP2R3A	6816	0.443	-0.0305	No
57	AGL	6973	0.423	-0.0361	No
58	HOXB5	7102	0.406	-0.0406	No
59	LRRTM4	7211	0.393	-0.0441	No
60	SP7	7214	0.392	-0.0428	No
61	CKM	7500	0.353	-0.0546	No
62	FOSB	7935	0.296	-0.0735	No
63	DVL3	8129	0.269	-0.0814	No
64	MAP1A	8260	0.253	-0.0864	No
65	CTDSP1	8301	0.247	-0.0874	No
66	PPARG	8381	0.235	-0.0902	No
67	TNNC1	8829	0.172	-0.1101	No
68	RAP1A	9206	0.119	-0.1270	No
69	NPPA	9379	0.092	-0.1345	No
70	POU3F4	9717	0.041	-0.1499	No
71	CNN1	9765	0.034	-0.1519	No
72	JMJD1A	9795	0.028	-0.1531	No
73	SIX2	9813	0.025	-0.1538	No
74	SEPX1	9896	0.013	-0.1576	No
75	STARD13	10083	-0.016	-0.1660	No
76	MYL1	10144	-0.026	-0.1687	No
77	GNG8	10315	-0.052	-0.1763	No
78	MYL9	10325	-0.053	-0.1766	No
79	MSX1	10717	-0.110	-0.1941	No
80	TAGLN	10864	-0.134	-0.2004	No
81	MUS81	10991	-0.154	-0.2056	No
82	EFHD1	11389	-0.204	-0.2231	No
83	AQP2	11624	-0.231	-0.2330	No
84	PRDM1	11841	-0.256	-0.2420	No
85	ACTR3	11907	-0.263	-0.2441	No
86	IGF2AS	12059	-0.278	-0.2500	No
87	BLOC1S1	12177	-0.292	-0.2543	No
88	LRRFIP1	12643	-0.349	-0.2745	No
89	PLN	13078	-0.400	-0.2930	No
90	H2AFX	13090	-0.401	-0.2920	No
91	RAI2	13177	-0.410	-0.2945	No
92	PFN1	13354	-0.432	-0.3010	No
93	EPHB1	13469	-0.447	-0.3046	No
94	NKX2-2	13482	-0.449	-0.3036	No
95	KCNA1	13486	-0.449	-0.3021	No
96	MYL7	13606	-0.461	-0.3059	No
97	MYO18B	13939	-0.503	-0.3193	No
98	DGKG	14341	-0.550	-0.3358	No
99	HOXA1	14710	-0.597	-0.3505	No
100	FOXE3	14721	-0.598	-0.3488	No
101	HIST1H4I	14803	-0.607	-0.3503	No
102	FGF8	14922	-0.621	-0.3535	No
103	PHF12	15006	-0.629	-0.3551	No
104	TADA3L	15092	-0.638	-0.3567	No
105	HOXA3	15093	-0.638	-0.3544	No
106	CSMD3	15169	-0.649	-0.3554	No
107	MYH11	15394	-0.677	-0.3633	No
108	IL17B	15461	-0.684	-0.3639	No
109	MYLK	15649	-0.708	-0.3699	No
110	ACAA2	15666	-0.711	-0.3680	No
111	MYO1E	15779	-0.725	-0.3706	No
112	HOXD13	15811	-0.729	-0.3694	No
113	KRTCAP2	15846	-0.734	-0.3683	No
114	GPR158	15941	-0.747	-0.3699	No
115	ACTN1	15953	-0.750	-0.3677	No
116	CACNA1B	16098	-0.771	-0.3715	No
117	NKX6-1	16226	-0.787	-0.3745	No
118	FOSL1	16325	-0.800	-0.3761	No
119	PLCB3	16358	-0.805	-0.3747	No
120	MAPKAPK2	16390	-0.809	-0.3731	No
121	FGFRL1	16396	-0.810	-0.3704	No
122	PCDH7	16430	-0.813	-0.3690	No
123	RBBP7	16538	-0.828	-0.3709	No
124	HOXD10	16566	-0.831	-0.3692	No
125	NAV1	16592	-0.834	-0.3673	No
126	ITGA7	16758	-0.855	-0.3718	No
127	HOXC5	16896	-0.874	-0.3749	No
128	WNT5A	17118	-0.911	-0.3818	No
129	GPR20	17162	-0.917	-0.3804	No
130	ARPC4	17232	-0.928	-0.3803	No
131	DHH	17280	-0.934	-0.3790	No
132	JPH2	17302	-0.938	-0.3766	No
133	ACTG2	17644	-0.997	-0.3887	No
134	SLC4A3	17725	-1.011	-0.3887	No
135	RSU1	17862	-1.035	-0.3912	No
136	HOXA5	18015	-1.061	-0.3943	No
137	CABP1	18101	-1.076	-0.3944	Yes
138	ATF4	18125	-1.079	-0.3915	Yes
139	CDKN1B	18144	-1.082	-0.3884	Yes
140	VCL	18239	-1.100	-0.3888	Yes
141	CSNK1E	18249	-1.101	-0.3852	Yes
142	UNC84B	18292	-1.111	-0.3831	Yes
143	CFL1	18320	-1.119	-0.3803	Yes
144	CALD1	18341	-1.123	-0.3771	Yes
145	DUSP5	18475	-1.149	-0.3791	Yes
146	PDLIM7	18630	-1.180	-0.3819	Yes
147	TPM2	18762	-1.208	-0.3835	Yes
148	PDLIM3	18840	-1.226	-0.3826	Yes
149	LDHA	18972	-1.257	-0.3841	Yes
150	COL1A2	19064	-1.274	-0.3837	Yes
151	GRK6	19126	-1.289	-0.3818	Yes
152	SVIL	19147	-1.295	-0.3781	Yes
153	SLC25A4	19161	-1.300	-0.3739	Yes
154	RUNDC1	19296	-1.339	-0.3753	Yes
155	MYL6	19370	-1.358	-0.3737	Yes
156	ABR	19483	-1.389	-0.3738	Yes
157	NPAS2	19533	-1.405	-0.3710	Yes
158	TITF1	19597	-1.423	-0.3687	Yes
159	NR2F1	19622	-1.432	-0.3646	Yes
160	KCNMB1	19719	-1.468	-0.3637	Yes
161	TRDN	19735	-1.473	-0.3591	Yes
162	ACTA1	20070	-1.597	-0.3687	Yes
163	FOXP2	20114	-1.616	-0.3648	Yes
164	TPM3	20175	-1.642	-0.3616	Yes
165	CX3CL1	20401	-1.741	-0.3657	Yes
166	DMD	20507	-1.799	-0.3640	Yes
167	GADD45G	20517	-1.805	-0.3578	Yes
168	SRF	20535	-1.816	-0.3520	Yes
169	TLE3	20574	-1.836	-0.3471	Yes
170	DUSP10	20732	-1.927	-0.3474	Yes
171	LSP1	20764	-1.943	-0.3418	Yes
172	NNAT	20797	-1.968	-0.3361	Yes
173	SIN3A	20857	-2.001	-0.3316	Yes
174	PRELP	20955	-2.071	-0.3285	Yes
175	KIF1B	20997	-2.115	-0.3228	Yes
176	NR2F2	21012	-2.123	-0.3157	Yes
177	SLC7A1	21110	-2.202	-0.3122	Yes
178	STAT5B	21219	-2.310	-0.3088	Yes
179	INSM1	21275	-2.374	-0.3028	Yes
180	FOXP3	21314	-2.435	-0.2957	Yes
181	HIVEP3	21332	-2.463	-0.2875	Yes
182	SIPA1	21344	-2.478	-0.2791	Yes
183	CITED2	21435	-2.655	-0.2736	Yes
184	JUNB	21440	-2.670	-0.2641	Yes
185	RASSF2	21452	-2.692	-0.2549	Yes
186	BDNF	21491	-2.758	-0.2466	Yes
187	FLNA	21593	-3.079	-0.2401	Yes
188	MYADM	21637	-3.193	-0.2305	Yes
189	TES	21647	-3.234	-0.2192	Yes
190	CORO1C	21703	-3.548	-0.2089	Yes
191	RERE	21714	-3.605	-0.1963	Yes
192	DUSP2	21727	-3.672	-0.1836	Yes
193	CNN2	21797	-4.241	-0.1714	Yes
194	ANXA6	21887	-5.560	-0.1554	Yes
195	FOS	21917	-6.478	-0.1332	Yes
196	NR4A1	21923	-6.633	-0.1095	Yes
197	EGR1	21942	-8.847	-0.0782	Yes
198	EGR3	21943	-9.744	-0.0430	Yes
199	EGR2	21944	-11.902	0.0001	Yes