Datasetset02_ATM_minus_versus_BT_ATM_minus
PhenotypeNoPhenotypeAvailable
Upregulated in classna_neg
GeneSetNEMETH_TNF_UP
Enrichment Score (ES)-0.5266431
Normalized Enrichment Score (NES)-2.1296558
Nominal p-value0.0
FDR q-value0.0014228467
FWER p-Value0.024
Table: GSEA Results Summary



Fig 1: Enrichment plot: NEMETH_TNF_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1APBB1IP3062.6030.0045No
2RNF118681.907-0.0076No
3PML13631.624-0.0186No
4MYO1014071.600-0.0092No
5KPNA314651.575-0.0006No
6IFI20318081.436-0.0060No
7IFI202B19231.383-0.0013No
8IFRD121541.312-0.0025No
9BCL2L122311.2830.0031No
10ETF124321.2150.0026No
11TOP130991.061-0.0203No
12ACSL431661.045-0.0159No
13GYK32001.037-0.0100No
14CCL334260.986-0.0133No
15CEBPD34620.977-0.0079No
16IER335210.965-0.0037No
172900009I07RIK39240.885-0.0158No
18EIF140650.861-0.0161No
19SLFN454150.646-0.0732No
20SLC11A155960.623-0.0770No
21PBEF156840.610-0.0766No
22SLFN1257710.596-0.0763No
23CDKN1A62570.518-0.0948No
24WSB163770.502-0.0967No
25SOD265730.477-0.1022No
26MARCKSL172990.380-0.1327No
27CLEC4N76630.330-0.1469No
28EIF2AK280370.283-0.1620No
29CLN311867-0.258-0.3353No
30C3AR112084-0.281-0.3432No
31BCL6B12936-0.383-0.3794No
32C5AR113581-0.458-0.4056No
33PRG113691-0.472-0.4072No
34JUND114067-0.516-0.4207No
35GCH114251-0.539-0.4253No
36MSR115091-0.638-0.4591No
37HMGCR15157-0.647-0.4575No
38TXNRD116140-0.775-0.4969No
39CFLAR16298-0.798-0.4984No
40MAPKAPK216390-0.809-0.4968No
41NFKBIA16391-0.809-0.4910No
42HCK16436-0.815-0.4872No
43TPST116545-0.828-0.4863No
44SAP3016637-0.840-0.4845No
45CASP416907-0.877-0.4905No
46PTGS217046-0.900-0.4904No
47NP17099-0.908-0.4863No
48CCL917821-1.025-0.5120No
49IL1RL117977-1.054-0.5116No
50IL1RN18058-1.069-0.5077No
51DAB218085-1.074-0.5012No
52RCN118354-1.125-0.5055No
53SLPI18560-1.165-0.5065No
54TRIM2518565-1.166-0.4984No
55RHOC18812-1.221-0.5010No
56TNF19341-1.351-0.5155No
57TNIP119385-1.362-0.5078No
58SQSTM119798-1.497-0.5160Yes
59FURIN19875-1.519-0.5086Yes
60MLLT1119884-1.522-0.4982Yes
61HCLS119929-1.540-0.4892Yes
62LTB20040-1.586-0.4830Yes
63ATF320071-1.597-0.4730Yes
64TAP120082-1.603-0.4620Yes
65STAT120172-1.640-0.4544Yes
66ETS220232-1.668-0.4452Yes
67TNFSF920359-1.724-0.4387Yes
68LCP220409-1.744-0.4285Yes
69MAP2K120473-1.779-0.4188Yes
70PRKCD20514-1.805-0.4077Yes
71DEGS120757-1.942-0.4050Yes
72NFKB120944-2.065-0.3988Yes
73ICAM121114-2.204-0.3908Yes
74SLC2A121119-2.209-0.3753Yes
75SAT121277-2.377-0.3655Yes
76CD4421333-2.464-0.3505Yes
77CITED221435-2.655-0.3362Yes
78TGFB121573-2.995-0.3212Yes
79IGTP21608-3.115-0.3005Yes
80SLC20A121618-3.142-0.2786Yes
81MYADM21637-3.193-0.2567Yes
82GLRX21641-3.213-0.2339Yes
83IIGP221645-3.224-0.2111Yes
84SLFN221669-3.350-0.1883Yes
85FCGR2B21689-3.450-0.1646Yes
86RGS1621704-3.548-0.1400Yes
87ADAR21719-3.627-0.1148Yes
88STK1021759-3.915-0.0887Yes
89H2-D121787-4.139-0.0605Yes
90IER221848-4.749-0.0294Yes
91TNFRSF1B21851-4.7630.0044Yes
Table: GSEA details [plain text format]



Fig 2: NEMETH_TNF_UP: Random ES distribution   
Gene set null distribution of ES for NEMETH_TNF_UP