DatasetSet_04_transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls
#transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls
#transDMproB_versus_transDMpreB_repos
Phenotypephenotype_transDMproB_versus_transDMpreB.cls#transDMproB_versus_transDMpreB_repos
Upregulated in classtransDMproB
GeneSetVESICLE_MEDIATED_TRANSPORT
Enrichment Score (ES)0.6035487
Normalized Enrichment Score (NES)1.5487984
Nominal p-value0.0
FDR q-value0.29611704
FWER p-Value0.961
Table: GSEA Results Summary



Fig 1: Enrichment plot: VESICLE_MEDIATED_TRANSPORT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SYTL424067867.8160.0410Yes
2M6PRBP1229301187.4040.0825Yes
3RAB2A162791377.2070.1237Yes
4RHOB44111686.8520.1620Yes
5LMAN2L5670 10070 56692056.3040.1969Yes
6SQSTM195172136.2430.2330Yes
7SYTL1157282426.0220.2666Yes
8PSCD3166332765.8420.2990Yes
9CPLX287793994.9540.3213Yes
10SCAMP2194304234.8100.3481Yes
11LRPAP150054704.5560.3722Yes
12SCIN210794714.5510.3988Yes
13SNAP29228375004.4250.4231Yes
14RAB14126857263.4750.4312Yes
15SNX4127853.2750.4472Yes
16PPT196138273.1780.4635Yes
17BET1L175708293.1740.4820Yes
18RAB1A209428933.0220.4963Yes
19VAMP3156608983.0070.5136Yes
20ERGIC314770 123369252.9430.5294Yes
21STX614091 1221312352.2370.5257Yes
22RAB351338612742.1730.5363Yes
23MYO61936813002.1400.5475Yes
24LRMP1724413192.1000.5588Yes
25NRBP1965615041.8070.5594Yes
26COPB21934615541.7420.5669Yes
27TXNDC11306716881.5800.5689Yes
28STX52394217241.5320.5759Yes
29GOSR12034518491.3490.5771Yes
30CCL52032018691.3270.5838Yes
31ZFYVE162139518911.3070.5903Yes
32RAC11630219221.2650.5961Yes
33GATA21737020401.1210.5963Yes
34PICALM1819120591.1070.6018Yes
35SCAMP31554322770.9580.5956Yes
36RAB7A9684 5347 968323800.8620.5951Yes
37GOSR220194 1372 136023930.8560.5995Yes
38GOLGA52117924100.8470.6035Yes
39CHMP1A1063425890.7060.5980No
40ACTR1A2365326540.6650.5984No
41CD142345227510.5900.5967No
42ANKRD2718290 10893 636827890.5580.5979No
43COPG21719328040.5520.6004No
44CCL32031728450.5280.6013No
45HOOK21854128880.5080.6020No
46PSCD21782629520.4750.6014No
47HFE2151931580.3790.5925No
48PSCD19629 529632120.3570.5917No
49PACSIN314948 8149 2776 266533860.2940.5840No
50RABEP112016 134434710.2680.5811No
51SEC22B1548635190.2530.5800No
52SEC23A542035540.2440.5796No
53FXN2370936900.2140.5735No
54HIP1567637640.1970.5707No
55SEPT5959838050.1900.5696No
56CLEC7A7142 16977 12157 111138070.1900.5707No
57RAB261160939470.1620.5641No
58VPS4B544641260.1330.5552No
59M6PR1053 5044 932841590.1290.5543No
60CPNE11118643200.1090.5462No
61COG32175143980.1010.5426No
62TSC22309044670.0950.5395No
63VPS4A1847546220.0830.5317No
64AKAP3856646410.0820.5312No
65STAB12189248670.0690.5194No
66SNX320044 341649370.0660.5160No
67ARFGEF1999549520.0650.5156No
68DNM12777 885749700.0640.5151No
69ADORA2A855755100.0460.4862No
70ATP6V1H1430155520.0450.4842No
71CCL82074055590.0450.4841No
72CADPS1129856030.0440.4821No
73SNAP232853 1489358880.0370.4669No
74ADORA11383160130.0340.4604No
75RPH3AL1172560680.0330.4576No
76CPLX11644764110.0260.4393No
77SEC22A1710 1731 1728 2260564980.0250.4348No
78ADRB31890165180.0240.4339No
79CPNE3768965490.0240.4324No
80RAB22A2888 534365730.0230.4313No
81OPTN1469367220.0210.4234No
82SPTBN413471 110467760.0200.4206No
83LRP1B824967940.0200.4198No
84SYTL218190 1539 373069510.0170.4115No
85ABCA11588169560.0170.4114No
86SYT1556571600.0140.4004No
87EXOC5837072990.0120.3930No
88SH3BP4827073310.0120.3914No
89BET11722676220.0080.3758No
90PRKCI957676820.0070.3726No
91LIN7A8424 423080910.0010.3505No
92MSR154178921-0.0090.3056No
93SPACA3136809111-0.0120.2955No
94GULP114254 3960 39329765-0.0200.2602No
95LRP816149 24259967-0.0230.2495No
96LRP214566 1456710308-0.0270.2312No
97GOLGA41202210330-0.0280.2302No
98TINAGL11358710532-0.0310.2195No
99COPB11767010612-0.0320.2154No
100RAB5A1131010797-0.0350.2057No
101SEC24B13622 191010842-0.0360.2035No
102CPNE62201010883-0.0370.2015No
103MAPK8IP311402 2308011012-0.0390.1948No
104PKDREJ2217011052-0.0400.1930No
105FOLR11773111068-0.0400.1924No
106NLGN11536811081-0.0400.1920No
107COG21842311123-0.0410.1900No
108ASGR12081211541-0.0500.1677No
109RAB131553511854-0.0570.1511No
110ITSN1919611918-0.0590.1480No
111RAMP32094912062-0.0630.1407No
112SEC22C10084 568012168-0.0660.1354No
113SCRN17649 1284012273-0.0690.1301No
114LYST9325 504012289-0.0690.1297No
115EEA15695 1009712414-0.0730.1234No
116STAB21965612508-0.0760.1188No
117CDH134506 382612518-0.0770.1188No
118AP3B2439412548-0.0780.1177No
119COLEC1223624 894612550-0.0780.1181No
120RIMS1857512570-0.0780.1175No
121KIF1C495112588-0.0790.1170No
122IGF2R2312312662-0.0820.1136No
123TOM13817 1856612879-0.0900.1024No
124AMPH3256 2170013004-0.0950.0962No
125LDLR499013326-0.1110.0795No
126SFTPD2186713350-0.1120.0789No
127STX161046413392-0.1150.0773No
128ARF62125213600-0.1290.0669No
129ELMO13275 8939 3202 3271 3254 3235 3164 3175 3274 3188 3293 3214 3218 323913606-0.1300.0674No
130COPZ12233813743-0.1410.0608No
131KIF20A2360214535-0.2300.0193No
132AHSG2281214630-0.2450.0157No
133CBL1915415001-0.315-0.0026No
134SEC23B14821 270915079-0.342-0.0047No
135AP4M13499 1665615134-0.359-0.0056No
136AP1S13500 3453 1633515247-0.392-0.0093No
137CLN31763515299-0.410-0.0097No
138VPS33B1820415383-0.436-0.0117No
139EPN11840115486-0.476-0.0144No
140COG71060515731-0.595-0.0242No
141RAMP22066015761-0.611-0.0222No
142COPE12228 7204 1222915868-0.673-0.0240No
143AP1M219209 8600 439315963-0.736-0.0248No
144SNX11907615966-0.740-0.0205No
145LMAN11286716157-0.887-0.0257No
146PDLIM7743416436-1.078-0.0344No
147CORO1C1642516551-1.200-0.0336No
148VTI1B21032 95716600-1.241-0.0289No
149ZW103114 1946416651-1.297-0.0241No
150NAPA2150 1838616853-1.553-0.0259No
151MRC11511616879-1.582-0.0180No
152SNX21974 23554 1258517020-1.722-0.0155No
153STX181685717067-1.775-0.0077No
154SORL1547417178-1.917-0.0024No
155ADRB22342217243-2.0320.0060No
156VTI1A11994 7009 1290817276-2.0770.0164No
157STX72007017673-2.8050.0113No
158ARFGEF21472817794-3.0730.0227No
159CD24871118026-3.7250.0320No
Table: GSEA details [plain text format]



Fig 2: VESICLE_MEDIATED_TRANSPORT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: VESICLE_MEDIATED_TRANSPORT: Random ES distribution   
Gene set null distribution of ES for VESICLE_MEDIATED_TRANSPORT