DatasetSet_04_transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls
#transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls
#transDMproB_versus_transDMpreB_repos
Phenotypephenotype_transDMproB_versus_transDMpreB.cls#transDMproB_versus_transDMpreB_repos
Upregulated in classtransDMproB
GeneSetJAK_STAT_CASCADE
Enrichment Score (ES)0.829027
Normalized Enrichment Score (NES)1.6685342
Nominal p-value0.0019305019
FDR q-value0.13878772
FWER p-Value0.219
Table: GSEA Results Summary



Fig 1: Enrichment plot: JAK_STAT_CASCADE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1STAT414251 9907219.6740.1888Yes
2SOCS256941487.0260.3200Yes
3STAT13936 55241736.7410.4511Yes
4STAT35525 99066813.6420.4953Yes
5IL12A49138203.1980.5507Yes
6STAT5A206648243.1800.6130Yes
7HCLS1227708503.1230.6729Yes
8SOCS3201319542.8530.7234Yes
9PIAS171269672.8290.7783Yes
10STAMBP1709710122.7020.8290Yes
11STAT21984018001.4210.8146No
12F2R2138624080.8480.7986No
13F21452425730.7200.8039No
14IFNAR222705 169931030.4070.7834No
15HGS2056835460.2460.7645No
16IFNAR12270347560.0750.7009No
17IL201384053860.0500.6681No
18STAT5B2022259830.0350.6367No
19SOCS612042 704460570.0330.6334No
20NMI1459069790.0170.5842No
21CCR21925070530.0160.5806No
22CCL2978875860.0090.5521No
23LYN1628176050.0080.5513No
24CLCF112160 374210051-0.0240.4202No
25IL22RA22008210739-0.0340.3840No
26NF21222 516612334-0.0700.2996No
27FGFR38969 356612854-0.0890.2734No
28IL31RA2134713174-0.1040.2583No
29SOCS1452217053-1.7540.0841No
Table: GSEA details [plain text format]



Fig 2: JAK_STAT_CASCADE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: JAK_STAT_CASCADE: Random ES distribution   
Gene set null distribution of ES for JAK_STAT_CASCADE