Details for gene set CATTGTYY_V$SOX9

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls #transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls #transDMproB_versus_transDMpreB_repos
Phenotype	phenotype_transDMproB_versus_transDMpreB.cls#transDMproB_versus_transDMpreB_repos
Upregulated in class	transDMproB
GeneSet	CATTGTYY_V$SOX9_B1
Enrichment Score (ES)	0.5801224
Normalized Enrichment Score (NES)	1.5606707
Nominal p-value	0.0
FDR q-value	0.050955124
FWER p-Value	0.492

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GFRA1	9015	7	10.510	0.0441	Yes
2	MARCKS	9331	19	9.740	0.0848	Yes
3	CNN3	12983	125	7.309	0.1100	Yes
4	HMGN3	19050 3091	161	6.924	0.1374	Yes
5	MEIS1	20524	179	6.639	0.1646	Yes
6	MYLK	22778 4213	200	6.379	0.1906	Yes
7	HHEX	23872	306	5.589	0.2085	Yes
8	CLIC4	11386 11342 6620 11387	331	5.412	0.2301	Yes
9	P2RX3	10446	375	5.070	0.2493	Yes
10	BCL11A	4691	412	4.861	0.2679	Yes
11	S100A1	15271	506	4.395	0.2815	Yes
12	MAML1	20477	541	4.212	0.2974	Yes
13	PRKCH	21246	544	4.206	0.3151	Yes
14	DDAH2	23263	553	4.149	0.3323	Yes
15	TCF4	5642	562	4.128	0.3493	Yes
16	DLX1	14988	605	3.925	0.3637	Yes
17	RRM2	5401 5400	611	3.902	0.3799	Yes
18	TIAM1	22547	618	3.884	0.3961	Yes
19	HSD11B1	9125 4019	631	3.850	0.4117	Yes
20	H3F3B	4839	632	3.843	0.4280	Yes
21	STAT3	5525 9906	681	3.642	0.4408	Yes
22	ABCF2	11338 6580 6579	743	3.425	0.4520	Yes
23	TRAF4	10217 5796 1400	889	3.037	0.4569	Yes
24	RAB1A	20942	893	3.022	0.4696	Yes
25	CDKN1A	4511 8729	940	2.886	0.4793	Yes
26	ITCH	4928 9185	960	2.841	0.4903	Yes
27	NDST2	21906	1042	2.640	0.4971	Yes
28	TPM4	11589 11588 6819	1135	2.448	0.5024	Yes
29	SLC4A1	20204	1149	2.421	0.5120	Yes
30	ELOVL6	5009	1271	2.175	0.5146	Yes
31	VCL	22083	1285	2.161	0.5230	Yes
32	RANBP9	21480	1288	2.159	0.5321	Yes
33	BMF	5074	1294	2.156	0.5409	Yes
34	RBMS1	14580	1316	2.109	0.5487	Yes
35	MAP4K4	11241	1341	2.060	0.5561	Yes
36	NT5C2	3768 8052	1507	1.802	0.5548	Yes
37	MYO18A	20766	1557	1.739	0.5595	Yes
38	ARID1A	8214 2501 13554	1644	1.632	0.5617	Yes
39	ADAM15	15275	1685	1.585	0.5663	Yes
40	DAB2IP	12808 2692	1692	1.573	0.5726	Yes
41	FBXL20	13010	1718	1.541	0.5778	Yes
42	PHC1	17013	1868	1.329	0.5753	Yes
43	EPHB6	17473	1945	1.235	0.5764	Yes
44	PICALM	18191	2059	1.107	0.5749	Yes
45	GPC2	16321	2147	1.020	0.5745	Yes
46	RASSF2	2802 14422	2167	1.012	0.5777	Yes
47	RANBP1	9692 5357	2202	1.000	0.5801	Yes
48	PPP1R16B	6014	2330	0.898	0.5770	No
49	CDK2	3438 3373 19592 3322	2439	0.823	0.5746	No
50	EIF4EBP2	4662	2465	0.803	0.5767	No
51	MBP	23502	2558	0.734	0.5748	No
52	HN1	9101	2677	0.642	0.5711	No
53	DMD	24295 2647	2796	0.556	0.5670	No
54	POLB	9599	2809	0.551	0.5687	No
55	TBX6	1993 18075	2851	0.526	0.5687	No
56	ELAVL1	4888	2855	0.523	0.5707	No
57	SEPHS1	15125	2934	0.483	0.5685	No
58	PTMA	9657	3013	0.450	0.5662	No
59	KIF1B	15671 2476 4950 15673	3014	0.449	0.5681	No
60	APRIN	4145	3055	0.429	0.5677	No
61	SLC39A9	11597	3265	0.336	0.5577	No
62	TOP1	5790 5789 10210	3426	0.279	0.5502	No
63	SLC26A9	11560 980 4067	3470	0.268	0.5490	No
64	CD68	4501	3482	0.265	0.5495	No
65	GRK5	9036 23814	3495	0.261	0.5500	No
66	CD96	22580	3497	0.260	0.5510	No
67	TLE1	5765 10185 15859	3591	0.236	0.5470	No
68	SOX5	9850 1044 5480 16937	3645	0.223	0.5450	No
69	ANK3	8591 3445 3304 3381	3717	0.207	0.5420	No
70	PBX1	5224	3783	0.195	0.5393	No
71	SIRT6	19668 3447	3784	0.195	0.5401	No
72	NOTCH3	23031	3789	0.194	0.5407	No
73	RAPH1	19110	3811	0.189	0.5404	No
74	GPR85	7227 1048	3830	0.184	0.5402	No
75	OLFM1	2918 2971	3836	0.183	0.5407	No
76	NUDT3	23056	3869	0.176	0.5397	No
77	CD151	18010 4494	3896	0.170	0.5390	No
78	MYCT1	7572	4252	0.116	0.5202	No
79	LIN28	15723	4329	0.108	0.5165	No
80	TNPO1	6232 3179	4352	0.105	0.5157	No
81	VWF	17277	4407	0.100	0.5132	No
82	FBXO28	7508 12612	4788	0.073	0.4929	No
83	MAPK3	6458 11170	4819	0.071	0.4915	No
84	GNG11	17532	4838	0.071	0.4908	No
85	CORO1A	1066 17631 1074	4885	0.068	0.4886	No
86	CNTF	3741 8761 3680 3736	4957	0.065	0.4850	No
87	CALD1	4273 8463	4983	0.064	0.4839	No
88	SILV	16130	5061	0.061	0.4800	No
89	CFL2	2155 21069	5176	0.057	0.4740	No
90	DCX	24040 8841 4604	5211	0.056	0.4724	No
91	APLN	24164	5313	0.053	0.4672	No
92	MITF	17349	5351	0.051	0.4654	No
93	BCL2L1	4440 2930 8652	5461	0.048	0.4596	No
94	FGF9	8966	5494	0.047	0.4581	No
95	MAOB	24182 2556	5545	0.045	0.4555	No
96	DOCK4	10705	5802	0.038	0.4418	No
97	SMARCD1	2241 22360 2250	5811	0.038	0.4415	No
98	HMGB1	9094 4855	5814	0.038	0.4416	No
99	MEOX1	20211	5927	0.036	0.4356	No
100	BMP5	19376	5930	0.036	0.4356	No
101	GNAO1	4785 3829	5992	0.034	0.4325	No
102	PNOC	21783	6012	0.034	0.4316	No
103	TRIM2	13485 8157	6064	0.033	0.4289	No
104	MYL3	19291	6133	0.032	0.4254	No
105	OSBP2	13194	6259	0.029	0.4187	No
106	CHN1	4246	6264	0.029	0.4186	No
107	LAMA1	23168	6446	0.026	0.4088	No
108	BAMBI	23629	6450	0.026	0.4088	No
109	CLOCK	8749 16507 4530	6452	0.026	0.4088	No
110	CHL1	17347 1146 8741 4520	6556	0.024	0.4033	No
111	CHST8	12754	6579	0.023	0.4022	No
112	FOXA1	21060	6817	0.019	0.3894	No
113	PNRC1	15925	6820	0.019	0.3894	No
114	PTPN4	13856	6847	0.019	0.3881	No
115	SYTL2	18190 1539 3730	6951	0.017	0.3825	No
116	HOXA3	9108 1075	6953	0.017	0.3825	No
117	TIA1	5752	7076	0.015	0.3760	No
118	TREX1	10219 3111	7204	0.014	0.3691	No
119	SRGAP1	19615	7244	0.013	0.3670	No
120	VLDLR	5858 3763 912 3682	7466	0.010	0.3550	No
121	NKX2-2	5176	7542	0.009	0.3510	No
122	SPG3A	7878 13145	7549	0.009	0.3507	No
123	HOXA2	17151	7565	0.009	0.3499	No
124	PAFAH1B2	5221 9525	7651	0.008	0.3453	No
125	AP1S2	8423 4228	7670	0.007	0.3444	No
126	ZNF8	6339	8005	0.002	0.3262	No
127	NGFR	5174	8054	0.002	0.3236	No
128	MTSS1	5585 22285	8332	-0.002	0.3085	No
129	SMARCA5	8215	8411	-0.003	0.3043	No
130	BASP1	7668	8425	-0.003	0.3036	No
131	NDST3	13501	8466	-0.004	0.3014	No
132	PRDM8	8084	8502	-0.004	0.2996	No
133	OLIG3	20084	8527	-0.004	0.2983	No
134	CSF3	1394 20671	8594	-0.005	0.2947	No
135	SIX1	9821	8648	-0.006	0.2918	No
136	CDX1	23429	8749	-0.007	0.2864	No
137	PER2	3940 13881	8769	-0.008	0.2854	No
138	MYH2	20838	8935	-0.010	0.2765	No
139	MOSPD2	24009	9149	-0.012	0.2649	No
140	NEUROD2	20262	9169	-0.012	0.2640	No
141	OLIG2	6953	9431	-0.016	0.2498	No
142	LHX6	9275 2914	9467	-0.016	0.2480	No
143	HOXD3	9115	9776	-0.020	0.2313	No
144	PRKCQ	2873 2831	9879	-0.022	0.2258	No
145	ARHGEF19	10035	10106	-0.025	0.2136	No
146	KCNN2	8933 1949	10150	-0.025	0.2114	No
147	TEAD1	18121	10270	-0.027	0.2050	No
148	PRDM1	19775 3337	10273	-0.027	0.2050	No
149	HOXA10	17145 989	10322	-0.028	0.2025	No
150	B3GALT2	6498	10395	-0.029	0.1987	No
151	HDAC9	21084 2131	10398	-0.029	0.1987	No
152	VAX1	23636	10663	-0.033	0.1845	No
153	TENC1	22349 9927	10666	-0.033	0.1845	No
154	EIF4E	15403 1827 8890	10781	-0.035	0.1785	No
155	GREB1	6490 2152	10952	-0.038	0.1694	No
156	MFAP5	17296	11030	-0.040	0.1654	No
157	SFRP1	9805	11091	-0.041	0.1623	No
158	PCDH12	7005	11229	-0.043	0.1550	No
159	PCDH18	15348	11239	-0.043	0.1547	No
160	NDST4	12259 7228	11311	-0.045	0.1510	No
161	ADAMTS5	6207	11345	-0.046	0.1494	No
162	DMP1	16776	11381	-0.046	0.1477	No
163	FGFR1	3789 8968	11386	-0.046	0.1477	No
164	UBE3A	1209 1084 1830	11503	-0.049	0.1416	No
165	SPAG9	1322 12904 7707	11538	-0.050	0.1399	No
166	WEE1	18127	11778	-0.055	0.1272	No
167	YWHAZ	10370	11819	-0.056	0.1252	No
168	MPZ	9408	11871	-0.057	0.1227	No
169	CNN1	8759	11917	-0.059	0.1205	No
170	SPATS2	13044	12070	-0.063	0.1125	No
171	TNRC4	15514	12081	-0.063	0.1122	No
172	LOXL4	23672	12089	-0.063	0.1121	No
173	HAPLN2	15296	12177	-0.066	0.1076	No
174	KLHL13	12536	12233	-0.068	0.1049	No
175	PAX3	13910	12314	-0.070	0.1008	No
176	FOSL2	4733 8978 16878	12429	-0.073	0.0950	No
177	KIF1C	4951	12588	-0.079	0.0867	No
178	SDCCAG8	14034	12598	-0.079	0.0865	No
179	MLLT6	20678	12609	-0.080	0.0863	No
180	IGF2R	23123	12662	-0.082	0.0838	No
181	BNC2	15850	12687	-0.083	0.0829	No
182	IL17B	12074	12737	-0.085	0.0806	No
183	TRPM3	23904 10357 5927	12762	-0.085	0.0796	No
184	FGFR3	8969 3566	12854	-0.089	0.0751	No
185	SEMA6C	1797 5424	12880	-0.090	0.0741	No
186	EDN1	21658	12885	-0.090	0.0742	No
187	MGAT5B	20584 11197	12962	-0.094	0.0705	No
188	PCSK2	9537 5231 14824	13013	-0.095	0.0682	No
189	ETS1	10715 6230 3135	13060	-0.098	0.0661	No
190	NAV1	3978 5681	13169	-0.103	0.0606	No
191	TNNI1	14116	13271	-0.108	0.0556	No
192	FGF10	4719 8962	13285	-0.109	0.0554	No
193	ERG	1686 8915	13304	-0.110	0.0548	No
194	FLI1	4729	13370	-0.113	0.0518	No
195	PTPN12	16597 3502 3586 3665	13477	-0.121	0.0465	No
196	MID1	5097 5098	13495	-0.122	0.0461	No
197	PAQR4	23105	13540	-0.125	0.0442	No
198	PLXDC2	15114	13544	-0.125	0.0446	No
199	ERH	9614 4681	13547	-0.126	0.0450	No
200	GJA12	20433 1323	13629	-0.132	0.0412	No
201	MDFI	22950	13645	-0.133	0.0409	No
202	PCBP4	12235	13833	-0.150	0.0314	No
203	PANK1	1687 23692	13858	-0.151	0.0307	No
204	SLC6A9	4783	13863	-0.151	0.0311	No
205	SOX2	9849 15612	13884	-0.153	0.0307	No
206	PHF6	2648 24340	13901	-0.155	0.0305	No
207	WNT1	22371	13932	-0.157	0.0295	No
208	SLC39A8	12547 1776	14206	-0.185	0.0154	No
209	ARF4	22072	14348	-0.203	0.0086	No
210	FOXP2	4312 17523 8523	14407	-0.211	0.0064	No
211	HOXB9	20689	14437	-0.215	0.0057	No
212	NDRG2	21843	14517	-0.227	0.0023	No
213	DYRK1A	4649	14547	-0.232	0.0017	No
214	SNAPC3	13397 2456 8085	14577	-0.237	0.0012	No
215	FGD4	10306 5870 1717 1669 1700	14665	-0.250	-0.0025	No
216	NUMBL	1663 9496	14721	-0.259	-0.0044	No
217	IGF1	3352 9156 3409	14748	-0.264	-0.0047	No
218	DLC1	11931 3855	14750	-0.264	-0.0036	No
219	CDK8	6455 6456 3585 3542	14763	-0.266	-0.0032	No
220	DPYSL5	92	15315	-0.416	-0.0314	No
221	NR2F6	4651 8876 18848 8912	15344	-0.425	-0.0311	No
222	STMN1	9261	15365	-0.429	-0.0304	No
223	PAK2	10310 5875	15483	-0.476	-0.0348	No
224	STAG3	16652	15492	-0.478	-0.0332	No
225	ILF2	12582	15668	-0.558	-0.0403	No
226	BCL2L11	2790 14861	15947	-0.727	-0.0524	No
227	HSPG2	4884 16023	15955	-0.730	-0.0497	No
228	MYST3	18651	16110	-0.855	-0.0544	No
229	ZCCHC8	3570 7696	16164	-0.892	-0.0536	No
230	RDH10	8272	16189	-0.914	-0.0510	No
231	BRPF1	17332	16229	-0.946	-0.0491	No
232	KPNA3	21797	16242	-0.961	-0.0457	No
233	PSIP1	4159 2507 8319	16320	-1.003	-0.0456	No
234	EIF3S10	4659 8887	16329	-1.005	-0.0418	No
235	FEN1	8961	16390	-1.035	-0.0407	No
236	CRMP1	16860	16439	-1.082	-0.0387	No
237	MPHOSPH1	23878	16518	-1.162	-0.0381	No
238	HYAL2	4891	16635	-1.286	-0.0389	No
239	TPM3	12233 7209 7208 1790	16773	-1.459	-0.0402	No
240	RKHD1	10693	16831	-1.530	-0.0368	No
241	GTF2E2	18635	16888	-1.589	-0.0331	No
242	HTF9C	4886 1678	17033	-1.730	-0.0337	No
243	PDE7A	9544 1788	17134	-1.859	-0.0312	No
244	NASP	2383 2387 6955	17226	-1.999	-0.0277	No
245	YWHAQ	10369	17241	-2.028	-0.0199	No
246	CDCA7	12437	17313	-2.120	-0.0148	No
247	TRIB2	21102	17728	-2.918	-0.0250	No
248	NXN	5204	17774	-3.029	-0.0146	No
249	SCD	23662	17945	-3.487	-0.0091	No
250	HMGN1	4856	18404	-5.366	-0.0113	No
251	DTX1	16396	18405	-5.374	0.0115	No