Details for gene set CELL_CYCLE_GO

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	CELL_CYCLE_GO_0007049
Enrichment Score (ES)	-0.50490475
Normalized Enrichment Score (NES)	-1.4743755
Nominal p-value	0.0
FDR q-value	0.7396696
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NDE1	7405 1759	35	3.592	0.0187	No
2	CDKN1C	17546	73	2.920	0.0335	No
3	CDK5R1	20745	128	2.574	0.0453	No
4	MSH5	23010 1599	189	2.294	0.0552	No
5	SERTAD1	18326	200	2.262	0.0677	No
6	CDKN2D	19210	342	1.960	0.0713	No
7	RHOB	4411	510	1.704	0.0720	No
8	CHMP1A	10634	542	1.668	0.0798	No
9	MAD2L1	17422	575	1.638	0.0875	No
10	SPO11	2666 14717	588	1.632	0.0962	No
11	NUSAP1	2956 4250	600	1.628	0.1050	No
12	PTEN	5305	607	1.620	0.1140	No
13	KPNA2	9245	788	1.443	0.1125	No
14	DTYMK	5776	844	1.392	0.1174	No
15	CCNG2	16790	863	1.377	0.1244	No
16	CCNA2	15357	1090	1.205	0.1190	No
17	DDB1	23931	1183	1.142	0.1205	No
18	BMP4	21863	1185	1.141	0.1270	No
19	CDKN1A	4511 8729	1187	1.141	0.1335	No
20	PPP6C	7491	1251	1.098	0.1364	No
21	ASNS	984 17218	1375	1.011	0.1355	No
22	RAN	5356 9691	1414	1.000	0.1392	No
23	ING4	6602 1155 1102 11371	1499	0.972	0.1402	No
24	RAD21	22298	1532	0.955	0.1439	No
25	ZWINT	19992	1539	0.949	0.1491	No
26	CCND3	4489 4490	1557	0.941	0.1535	No
27	GMNN	21513	1618	0.906	0.1555	No
28	SMAD3	19084	1649	0.891	0.1590	No
29	TIPIN	3013 7258	1705	0.857	0.1609	No
30	HSPA2	21237	1714	0.851	0.1653	No
31	STMN1	9261	1734	0.837	0.1691	No
32	CDKN2A	2491 15841	1978	0.701	0.1599	No
33	SUGT1	21947	2020	0.682	0.1616	No
34	SMC3	8811 23815 8812 4571	2038	0.672	0.1645	No
35	RAD17	21366	2165	0.607	0.1611	No
36	CETN3	21597	2230	0.571	0.1609	No
37	GADD45A	17129	2259	0.557	0.1626	No
38	NDC80	22900	2318	0.537	0.1625	No
39	APC	4396 2022	2338	0.526	0.1645	No
40	STRN3	884 21074	2440	0.492	0.1618	No
41	PCAF	5226 9532 5225	2506	0.466	0.1610	No
42	RCC1	15735	2542	0.452	0.1616	No
43	MAD2L2	15992	2707	0.390	0.1550	No
44	RB1	21754	2742	0.381	0.1553	No
45	EIF4G2	1908 8892	2927	0.331	0.1472	No
46	DUSP13	21904	3106	0.284	0.1391	No
47	NPM2	11602	3127	0.281	0.1396	No
48	RAD1	22507	3168	0.273	0.1390	No
49	HPGD	4867	3266	0.254	0.1352	No
50	ANAPC4	16846	3269	0.253	0.1365	No
51	SSSCA1	7112 12116	3316	0.243	0.1354	No
52	RAD50	1198 20460	3326	0.242	0.1363	No
53	MNAT1	9396 2161	3328	0.242	0.1377	No
54	CDC20	8421 8422 4227	3387	0.232	0.1358	No
55	PFDN1	23458	3411	0.228	0.1359	No
56	CDCA5	23788	3483	0.217	0.1333	No
57	POLS	9963	3520	0.211	0.1325	No
58	CCNE2	4491	3522	0.211	0.1337	No
59	CDK10	3818 6157 10635 3894	3569	0.203	0.1323	No
60	PRMT5	6571 2817	3609	0.198	0.1313	No
61	SKP2	6576 11337 2236	3625	0.195	0.1316	No
62	ANAPC2	15088	3716	0.185	0.1278	No
63	AIF1	1582 23005	3793	0.177	0.1247	No
64	UBE2C	12714	3801	0.176	0.1253	No
65	AURKA	14325	3808	0.175	0.1260	No
66	XRCC2	16583	4033	0.149	0.1146	No
67	RAD51L1	2129 21226	4124	0.140	0.1105	No
68	RACGAP1	2240 22132	4213	0.131	0.1065	No
69	BTG3	8664	4217	0.131	0.1071	No
70	BCCIP	18042 903 1445 904	4227	0.130	0.1073	No
71	CDKN2B	15840	4312	0.123	0.1035	No
72	EREG	4679 16797	4331	0.121	0.1032	No
73	CUL5	7981	4554	0.108	0.0917	No
74	CCNT1	22140 11607	4576	0.107	0.0912	No
75	PAM	5222	4644	0.103	0.0881	No
76	PIN1	19548	4786	0.095	0.0810	No
77	SPHK1	5484 1266 1402	5106	0.081	0.0641	No
78	CENTD2	1758 18169 2284	5239	0.076	0.0573	No
79	CHEK1	19181 3085	5253	0.076	0.0570	No
80	ANLN	7581 3138 12730	5353	0.073	0.0521	No
81	STAG3	16652	5389	0.072	0.0506	No
82	MAPK12	2182 2215 22164	5571	0.066	0.0411	No
83	FBXO5	19830	5577	0.066	0.0412	No
84	MLF1	15573	5764	0.060	0.0314	No
85	RAD51	2897 14903	5880	0.057	0.0255	No
86	ATM	2976 19115	5932	0.056	0.0230	No
87	CDC45L	22642 1752	5968	0.055	0.0214	No
88	CDC23	6985	6031	0.053	0.0183	No
89	MADD	2926 14526	6035	0.053	0.0185	No
90	BOLL	7960	6150	0.050	0.0126	No
91	NBN	2485 16268 2408	6219	0.049	0.0091	No
92	GTF2H1	4069 18236	6279	0.047	0.0062	No
93	PLAGL1	10372 3414	6386	0.045	0.0007	No
94	TGFA	17381	6403	0.045	0.0001	No
95	AHR	21083	6440	0.044	-0.0016	No
96	CDKN3	16965	6452	0.044	-0.0020	No
97	RUNX3	8702	6703	0.039	-0.0154	No
98	APBB2	8607	6808	0.038	-0.0208	No
99	CKS2	7264	6862	0.037	-0.0235	No
100	USH1C	1471 17821	7088	0.033	-0.0356	No
101	ANAPC10	7595 12760 7596	7106	0.033	-0.0363	No
102	KATNA1	20093	7554	0.026	-0.0605	No
103	NEK2	5160	7731	0.023	-0.0700	No
104	ANAPC11	20565	7821	0.022	-0.0747	No
105	INHA	14214	8158	0.018	-0.0929	No
106	RAD9A	913 3674 910 23958	8309	0.016	-0.1010	No
107	ERCC2	1549 18363 3812	8357	0.016	-0.1035	No
108	DHRS2	22011	8440	0.015	-0.1079	No
109	LATS2	11923 6928	8593	0.013	-0.1161	No
110	BUB1	8665	8646	0.012	-0.1188	No
111	MFN2	15678 2417	8669	0.012	-0.1200	No
112	TIMELESS	10177	8686	0.012	-0.1208	No
113	CDKN1B	4512 8730	8749	0.011	-0.1241	No
114	POLA1	24112	8845	0.010	-0.1292	No
115	CCNA1	15340	8884	0.010	-0.1312	No
116	GPS1	1392 9943 5550 9944	8964	0.009	-0.1355	No
117	CDK5R2	14220	8994	0.009	-0.1370	No
118	MYC	22465 9435	9165	0.007	-0.1462	No
119	KIF15	9955 5563 19257	9212	0.006	-0.1487	No
120	GAS1	21435	9285	0.005	-0.1526	No
121	RPRM	14588	9334	0.005	-0.1552	No
122	CCNT2	3993 13079	9444	0.004	-0.1611	No
123	SH3BP4	8270	9507	0.003	-0.1644	No
124	CD28	14239 4092	9636	0.002	-0.1714	No
125	NPM1	1196	9669	0.001	-0.1731	No
126	CDC7	16765 3477	9671	0.001	-0.1732	No
127	TTN	14552 2743 14553	9976	-0.002	-0.1897	No
128	CENPE	15414	10137	-0.004	-0.1984	No
129	NEK6	15018	10324	-0.006	-0.2085	No
130	BMP7	14324	10622	-0.009	-0.2247	No
131	JMY	7173	10758	-0.010	-0.2320	No
132	TBX3	16723	10868	-0.012	-0.2378	No
133	CETN1	6443	10941	-0.012	-0.2417	No
134	NEK11	3099 19016	11012	-0.013	-0.2454	No
135	SYCP1	15217	11179	-0.015	-0.2544	No
136	KIF11	23873	11190	-0.015	-0.2548	No
137	CDK7	21365	11317	-0.017	-0.2616	No
138	BMP2	14833	11442	-0.018	-0.2683	No
139	PML	3015 3074 3020 5270	11499	-0.019	-0.2712	No
140	CUL2	23630	11536	-0.019	-0.2731	No
141	TUBE1	20053 194	11804	-0.023	-0.2875	No
142	ERN1	8137	11956	-0.025	-0.2956	No
143	HERC5	12476	11987	-0.025	-0.2971	No
144	MSH4	15135	12076	-0.026	-0.3017	No
145	PPP1R13B	10211 20980	12078	-0.026	-0.3016	No
146	EGFL6	24006	12328	-0.030	-0.3150	No
147	FOXC1	21676	12586	-0.033	-0.3288	No
148	CDC6	6221 6220	12613	-0.034	-0.3300	No
149	CCNK	21160	12849	-0.038	-0.3426	No
150	CDC25C	23468 1954 1977	12850	-0.038	-0.3424	No
151	PIM2	5249 9564 9565	12913	-0.039	-0.3456	No
152	EPGN	16798	12957	-0.040	-0.3477	No
153	NOTCH2	15485	13013	-0.041	-0.3504	No
154	GTPBP4	21548	13290	-0.046	-0.3652	No
155	CITED2	5118 14477	13366	-0.048	-0.3690	No
156	PLK1	9590 5266	13536	-0.052	-0.3779	No
157	HUS1	9138 4890	13547	-0.052	-0.3782	No
158	BTG4	19456	13564	-0.052	-0.3788	No
159	TGFB2	5743	13691	-0.056	-0.3853	No
160	CUL4A	3832 8281 13618	14055	-0.066	-0.4047	No
161	DMC1	22207	14082	-0.066	-0.4057	No
162	CHFR	3646 16757 3624	14105	-0.067	-0.4066	No
163	SMC1A	2572 24225 6279 10780	14125	-0.068	-0.4072	No
164	CCND1	4487 4488 8707 17535	14255	-0.072	-0.4138	No
165	ALOX15B	20397	14284	-0.073	-0.4149	No
166	TPD52L1	3420 19793	14366	-0.076	-0.4189	No
167	MDM4	5086 5085	14477	-0.081	-0.4244	No
168	CDC16	18676	14483	-0.081	-0.4242	No
169	UHMK1	4038 4957	14708	-0.091	-0.4359	No
170	CDK4	3424 19859	14762	-0.094	-0.4383	No
171	CLIP1	3603 7121	14781	-0.095	-0.4387	No
172	DLG1	22793 1672	14788	-0.096	-0.4385	No
173	ABL1	2693 4301 2794	14968	-0.108	-0.4476	No
174	PTPRC	5327 9662	15157	-0.123	-0.4571	No
175	TTK	19366	15162	-0.123	-0.4567	No
176	TOP3A	5792	15472	-0.155	-0.4726	No
177	RAD51L3	1423 9686 5351 1275 1311	15491	-0.157	-0.4727	No
178	ATR	19349	15504	-0.158	-0.4724	No
179	CHEK2	16751 3587	15526	-0.161	-0.4726	No
180	RABGAP1	10439	15539	-0.163	-0.4724	No
181	MCM2	17074	15571	-0.167	-0.4731	No
182	FANCG	15904	15580	-0.169	-0.4726	No
183	CUL3	6470	15589	-0.172	-0.4720	No
184	EGF	15169	15676	-0.185	-0.4756	No
185	PPP1R9B	20698	15722	-0.194	-0.4770	No
186	CDK6	16600	15747	-0.199	-0.4771	No
187	MAP2K6	20614 1414	15832	-0.216	-0.4805	No
188	CCNG1	4492 1236 1390	15848	-0.219	-0.4800	No
189	SESN1	20045	15861	-0.221	-0.4794	No
190	GFI1B	14637	15927	-0.235	-0.4816	No
191	ZW10	3114 19464	15994	-0.251	-0.4838	No
192	ACVR1B	4335 22353	16019	-0.256	-0.4836	No
193	CDC37	19214	16033	-0.259	-0.4828	No
194	SNF1LK	23033	16175	-0.297	-0.4888	No
195	BCAT1	1042 4434	16223	-0.312	-0.4896	No
196	BUB1B	14908	16249	-0.318	-0.4891	No
197	ACVR1	4334	16280	-0.327	-0.4889	No
198	DCTN3	15908	16335	-0.346	-0.4898	No
199	ERCC3	23605	16391	-0.367	-0.4907	No
200	UBB	10240	16439	-0.386	-0.4910	No
201	AKAP8	12121	16474	-0.399	-0.4906	No
202	BIRC5	8611 8610 4399	16485	-0.403	-0.4888	No
203	KHDRBS1	5405 9778	16689	-0.478	-0.4972	No
204	TGFB1	18332	16831	-0.548	-0.5017	Yes
205	CUL1	17462	16891	-0.584	-0.5016	Yes
206	PA2G4	5265	16906	-0.589	-0.4989	Yes
207	TBRG1	3119 19174	16936	-0.602	-0.4971	Yes
208	CENPF	13723	16956	-0.616	-0.4946	Yes
209	SMC4	15568	17037	-0.668	-0.4951	Yes
210	CDC25B	14841	17098	-0.711	-0.4943	Yes
211	MRE11A	3014 19560	17156	-0.746	-0.4931	Yes
212	ANAPC5	12221 3597	17189	-0.775	-0.4904	Yes
213	MAP3K11	11163	17263	-0.835	-0.4896	Yes
214	CDK2	3438 3373 19592 3322	17283	-0.848	-0.4857	Yes
215	PPM1G	16571	17315	-0.879	-0.4824	Yes
216	BRCA2	16612	17317	-0.884	-0.4773	Yes
217	MYH10	8077	17365	-0.915	-0.4746	Yes
218	RASSF1	12091 3120	17422	-0.953	-0.4722	Yes
219	KNTC1	16705	17471	-0.992	-0.4691	Yes
220	PAFAH1B1	1340 5220 9524	17497	-1.002	-0.4647	Yes
221	TBRG4	1422 20529	17526	-1.016	-0.4604	Yes
222	CIT	16727	17530	-1.019	-0.4547	Yes
223	E2F1	14384	17550	-1.032	-0.4498	Yes
224	RAD52	17306	17571	-1.052	-0.4449	Yes
225	CDC25A	8721	17619	-1.092	-0.4412	Yes
226	LIG3	4998	17699	-1.180	-0.4387	Yes
227	CDK5RAP1	2808 2863 14387	17747	-1.231	-0.4342	Yes
228	TARDBP	10520 6066	17762	-1.243	-0.4278	Yes
229	GSPT1	9046	17801	-1.282	-0.4225	Yes
230	NCAPH	14444	17823	-1.309	-0.4162	Yes
231	NASP	2383 2387 6955	17824	-1.310	-0.4086	Yes
232	POLE	16755	17862	-1.338	-0.4030	Yes
233	PPP5C	17952	17891	-1.367	-0.3966	Yes
234	NUMA1	18167	17971	-1.467	-0.3925	Yes
235	KIF22	17624	17983	-1.488	-0.3846	Yes
236	CDK2AP1	8858	18013	-1.531	-0.3773	Yes
237	MPHOSPH6	12704	18025	-1.547	-0.3691	Yes
238	DCTN2	7635 12812	18067	-1.582	-0.3622	Yes
239	USP16	22716	18113	-1.638	-0.3552	Yes
240	GFI1	16451	18149	-1.695	-0.3474	Yes
241	XPC	5925	18154	-1.700	-0.3379	Yes
242	UPF1	9718 18855	18170	-1.723	-0.3288	Yes
243	HCFC1	24130	18171	-1.724	-0.3189	Yes
244	KIF23	19091	18180	-1.748	-0.3093	Yes
245	PCBP4	12235	18187	-1.763	-0.2995	Yes
246	PRC1	12862 18203	18264	-1.927	-0.2926	Yes
247	CDT1	18437	18268	-1.929	-0.2816	Yes
248	CDK5RAP3	20279	18299	-1.997	-0.2718	Yes
249	GPS2	12096	18373	-2.169	-0.2633	Yes
250	TPX2	14790	18388	-2.195	-0.2515	Yes
251	NOLC1	7704	18425	-2.298	-0.2402	Yes
252	APBB1	17705	18429	-2.320	-0.2271	Yes
253	DLG7	21858	18430	-2.320	-0.2137	Yes
254	DDX11	23169	18439	-2.348	-0.2007	Yes
255	RAD54L	9687	18446	-2.400	-0.1872	Yes
256	STK11	19950	18455	-2.438	-0.1737	Yes
257	CDKN2C	15806 2321	18509	-2.692	-0.1611	Yes
258	KIF2C	15789	18518	-2.771	-0.1456	Yes
259	POLD1	17847	18525	-2.830	-0.1297	Yes
260	TUBG1	20662	18526	-2.867	-0.1132	Yes
261	GAS7	20836 1299	18553	-3.136	-0.0966	Yes
262	CCND2	16987	18573	-3.414	-0.0780	Yes
263	ZBTB17	10376	18577	-3.476	-0.0582	Yes
264	UHRF2	3731 4262 8452 23887	18592	-4.061	-0.0357	Yes
265	TP53	20822	18610	-6.426	0.0003	Yes