Details for gene set V$NMYC

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	V$NMYC_01
Enrichment Score (ES)	-0.4800705
Normalized Enrichment Score (NES)	-1.3680829
Nominal p-value	0.0058479533
FDR q-value	0.59948367
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARF6	21252	294	2.049	0.0058	No
2	NR1D1	4650 20258 949	335	1.975	0.0247	No
3	GNA13	20617	442	1.793	0.0380	No
4	HMGN2	9095	481	1.743	0.0545	No
5	VARS2	23265 1595 7588	539	1.670	0.0691	No
6	TEF	2287 22414 2192	564	1.646	0.0853	No
7	UBE1	24370 2551	620	1.611	0.0995	No
8	PES1	7236	824	1.410	0.1035	No
9	PANK3	20924	1014	1.254	0.1065	No
10	PFKFB3	2748	1091	1.204	0.1152	No
11	RPL22	15979	1116	1.187	0.1266	No
12	RPIA	17124	1153	1.167	0.1370	No
13	PSEN2	13736	1216	1.120	0.1456	No
14	RCL1	3728 3743 23894	1426	0.999	0.1448	No
15	COPS7A	11221 16997	1600	0.918	0.1452	No
16	HSPE1	9133	1756	0.828	0.1456	No
17	PRDX4	24026	1778	0.815	0.1531	No
18	GADD45G	21637	1969	0.706	0.1503	No
19	CDC14A	15184	2060	0.662	0.1525	No
20	ARRDC3	4191	2084	0.651	0.1582	No
21	CEBPB	8733	2141	0.621	0.1617	No
22	MAPKAPK3	19003	2253	0.560	0.1617	No
23	SRP72	16819	2430	0.495	0.1574	No
24	TIMM9	19686	2450	0.488	0.1616	No
25	HMOX1	18565	2520	0.460	0.1627	No
26	AP1GBP1	20725	2661	0.409	0.1595	No
27	EIF4B	13279 7979	2827	0.356	0.1543	No
28	MAX	21034	2934	0.328	0.1520	No
29	ZZZ3	15389 8445 4253 8444 1761	2948	0.323	0.1548	No
30	ZHX2	11842	3037	0.302	0.1532	No
31	SLC20A1	14855	3055	0.298	0.1554	No
32	BCL7C	4442	3279	0.251	0.1460	No
33	CACNA1D	4464 8675	3283	0.249	0.1485	No
34	MYST3	18651	3498	0.214	0.1392	No
35	GTPBP1	4814 2255	3680	0.189	0.1314	No
36	SFXN2	3707 8255 3678 13588	3825	0.172	0.1254	No
37	BMP2K	3657 16786	3836	0.171	0.1267	No
38	KRTCAP2	15541	3841	0.170	0.1283	No
39	ADAMTS17	598	3875	0.165	0.1282	No
40	DUSP4	18632 3820	3883	0.164	0.1296	No
41	RAMP2	20660	3901	0.161	0.1304	No
42	U2AF2	5813 5812 5814	4089	0.143	0.1218	No
43	USP2	19480 3052 3043	4152	0.137	0.1199	No
44	PLAG1	7148 15949 12161	4540	0.109	0.1000	No
45	STAT3	5525 9906	4604	0.106	0.0977	No
46	HRSP12	9123 9122 4870 9638	4782	0.095	0.0892	No
47	CTBP2	17591 1137	4842	0.092	0.0869	No
48	HRH3	14317	4955	0.087	0.0818	No
49	MNT	20784	5133	0.080	0.0730	No
50	GADD45B	19935	5166	0.079	0.0722	No
51	B4GALT2	11990	5295	0.074	0.0660	No
52	NR5A1	14597	5749	0.061	0.0421	No
53	AKAP10	20411 7145	5772	0.060	0.0415	No
54	LHX9	9276	5867	0.058	0.0370	No
55	PABPC1	5219 9522 9523 23572	6169	0.050	0.0212	No
56	DNAJB9	6565	6352	0.046	0.0119	No
57	PLAGL1	10372 3414	6386	0.045	0.0106	No
58	ADPRHL1	18930 3863	6465	0.044	0.0068	No
59	NUP153	21474	6570	0.042	0.0016	No
60	NXPH1	17524	6679	0.040	-0.0038	No
61	MCM8	14834	6705	0.039	-0.0048	No
62	KIAA0427	11228	6900	0.036	-0.0149	No
63	AMPD2	1931 15197	6988	0.035	-0.0193	No
64	TLE3	5767 19416	7035	0.034	-0.0214	No
65	HPCA	9118	7054	0.033	-0.0220	No
66	NKX2-2	5176	7393	0.028	-0.0400	No
67	TIAL1	996 5753	7580	0.026	-0.0499	No
68	SNCAIP	12589	8009	0.020	-0.0729	No
69	XRN2	2936 6302 2905	8194	0.017	-0.0827	No
70	WEE1	18127	8265	0.017	-0.0863	No
71	RAD9A	913 3674 910 23958	8309	0.016	-0.0884	No
72	LAP3	12442	8435	0.015	-0.0951	No
73	ADAM10	4336	8519	0.014	-0.0994	No
74	POU3F1	16093	8676	0.012	-0.1077	No
75	HBP1	2048 2162 21086	8762	0.011	-0.1122	No
76	CUGBP1	2805 8819 4576 2924	8792	0.011	-0.1137	No
77	TESK2	10504	8793	0.011	-0.1136	No
78	GPS1	1392 9943 5550 9944	8964	0.009	-0.1227	No
79	SLC17A2	10163 5744	9089	0.008	-0.1294	No
80	NEUROD6	17138	9111	0.007	-0.1304	No
81	PLA2G4A	13809	9404	0.004	-0.1462	No
82	PRKCE	9575	9432	0.004	-0.1476	No
83	DNMT3A	2167 21330	9546	0.003	-0.1537	No
84	SCFD2	5607	9549	0.003	-0.1538	No
85	NPM1	1196	9669	0.001	-0.1602	No
86	SC5DL	6165	9677	0.001	-0.1606	No
87	HHIP	4849	9733	0.001	-0.1636	No
88	COL2A1	22145 4542	9899	-0.001	-0.1725	No
89	SGTB	21571	10021	-0.003	-0.1791	No
90	B3GALT2	6498	10027	-0.003	-0.1793	No
91	SOCS5	1619 23141	10084	-0.003	-0.1823	No
92	RTN4RL2	14544	10176	-0.004	-0.1872	No
93	APOA5	19469	10504	-0.008	-0.2048	No
94	CTSF	23772	10570	-0.008	-0.2083	No
95	NDUFS1	13940	10640	-0.009	-0.2119	No
96	NRAS	5191	10835	-0.011	-0.2223	No
97	EN2	16898	11039	-0.013	-0.2332	No
98	HS3ST3A1	20844	11276	-0.016	-0.2458	No
99	ENPP6	6816 11583	11329	-0.017	-0.2485	No
100	BARHL1	14634	11586	-0.020	-0.2621	No
101	ANXA6	20449	11698	-0.022	-0.2679	No
102	GPC3	24151	11813	-0.023	-0.2739	No
103	GRIN2A	22668	11864	-0.024	-0.2763	No
104	ALX4	4379	12146	-0.027	-0.2913	No
105	SEMA3F	18999 3097	12235	-0.028	-0.2957	No
106	SLC12A5	14731	12288	-0.029	-0.2982	No
107	POGK	7739	12743	-0.036	-0.3225	No
108	FKBP10	20667	12831	-0.038	-0.3268	No
109	RUNX2	4480 8700	12860	-0.038	-0.3279	No
110	STMN4	21977	12916	-0.039	-0.3305	No
111	ANGPT2	14885 3783 18923	12990	-0.040	-0.3340	No
112	BAI2	2541 2379 16067	13112	-0.043	-0.3401	No
113	HOXC13	22344	13201	-0.044	-0.3444	No
114	PCDHA10	8792	13252	-0.045	-0.3466	No
115	MTHFD1	2132 21238	13276	-0.046	-0.3474	No
116	FGF11	20383	13298	-0.046	-0.3480	No
117	SEPT3	6275 10775	13551	-0.052	-0.3612	No
118	JPH1	13994	13771	-0.058	-0.3724	No
119	CHRM1	23943	14029	-0.065	-0.3857	No
120	ABCA1	15881	14161	-0.069	-0.3920	No
121	NRXN1	1581 1575 22875	14220	-0.071	-0.3944	No
122	ADCY3	21329 894	14501	-0.082	-0.4088	No
123	NEUROD2	20262	14557	-0.084	-0.4108	No
124	FLT3	16288	14723	-0.092	-0.4188	No
125	PDK2	20285	14725	-0.092	-0.4179	No
126	CHST11	19921	14819	-0.097	-0.4219	No
127	RNF128	24236 2641	14921	-0.105	-0.4263	No
128	HOXB7	666 9110	15264	-0.132	-0.4434	No
129	BCL2	8651 3928 13864 4435 981 4062 13863 4027	15568	-0.167	-0.4581	No
130	TPM2	2367 2437	15640	-0.180	-0.4600	No
131	DLC1	11931 3855	15765	-0.202	-0.4646	No
132	ATP6V0B	15786	15794	-0.208	-0.4639	No
133	LIN28	15723	15884	-0.225	-0.4663	No
134	SOX12	5478	15908	-0.229	-0.4651	No
135	RBM3	5366 2625	15914	-0.231	-0.4630	No
136	SEMA7A	19426 9803	15940	-0.238	-0.4618	No
137	KCNK5	4946 9212	15977	-0.247	-0.4611	No
138	ETV1	4688 8925 8924	16020	-0.257	-0.4607	No
139	PPAT	6081	16166	-0.296	-0.4654	No
140	LMNB1	23549 1943	16195	-0.304	-0.4637	No
141	CLCN2	22637	16288	-0.330	-0.4651	No
142	ATP5G1	8636	16499	-0.407	-0.4722	No
143	EIF3S1	905 8114	16645	-0.457	-0.4752	Yes
144	RPL13A	10226 79	16650	-0.463	-0.4705	Yes
145	GRK6	6449	16806	-0.538	-0.4732	Yes
146	PA2G4	5265	16906	-0.589	-0.4723	Yes
147	POLR3E	18100	16973	-0.630	-0.4692	Yes
148	RBBP6	5365	16981	-0.632	-0.4628	Yes
149	HYAL2	4891	17179	-0.766	-0.4654	Yes
150	G6PC3	1221 20645	17203	-0.785	-0.4583	Yes
151	IPO4	7983	17221	-0.804	-0.4507	Yes
152	SH3KBP1	2631 12206 7189	17281	-0.847	-0.4448	Yes
153	PABPC4	10510 2418 2548	17496	-1.002	-0.4458	Yes
154	PPARGC1B	9318	17592	-1.069	-0.4396	Yes
155	MXD4	9346	17634	-1.101	-0.4301	Yes
156	WBP2	20146	17681	-1.170	-0.4201	Yes
157	LIG3	4998	17699	-1.180	-0.4085	Yes
158	PFN1	9555	17756	-1.238	-0.3984	Yes
159	GPD1	22361	17760	-1.242	-0.3854	Yes
160	ZCCHC7	16225	17786	-1.268	-0.3732	Yes
161	GJA1	20023	17834	-1.315	-0.3618	Yes
162	IPO13	15784	17902	-1.378	-0.3508	Yes
163	HTF9C	4886 1678	17954	-1.450	-0.3381	Yes
164	TIMM10	11390 2158	17991	-1.495	-0.3242	Yes
165	HSPD1	4078 9129	18026	-1.548	-0.3096	Yes
166	SCYL1	23986	18070	-1.585	-0.2950	Yes
167	FBL	8955	18214	-1.809	-0.2836	Yes
168	NOL5A	12474	18250	-1.893	-0.2653	Yes
169	DLX1	14988	18255	-1.899	-0.2453	Yes
170	FHOD1	18772	18271	-1.934	-0.2256	Yes
171	ELOVL6	5009	18296	-1.991	-0.2057	Yes
172	EIF4G1	22818	18370	-2.167	-0.1866	Yes
173	TOP1	5790 5789 10210	18440	-2.355	-0.1653	Yes
174	RXRB	23285 9768	18477	-2.529	-0.1404	Yes
175	FKBP5	23051	18492	-2.579	-0.1137	Yes
176	ATAD3A	8440	18558	-3.172	-0.0835	Yes
177	VPS16	2927 14845 2825	18565	-3.293	-0.0489	Yes
178	SLC38A5	24388	18603	-4.850	0.0007	Yes