Details for gene set V$HNF4_DR1

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	V$HNF4_DR1_Q3
Enrichment Score (ES)	-0.47537664
Normalized Enrichment Score (NES)	-1.3444158
Nominal p-value	0.0057306592
FDR q-value	0.51755357
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SGK	9809 3419	69	2.979	0.0296	No
2	PICALM	18191	113	2.628	0.0567	No
3	LAMP2	9267 2653	118	2.612	0.0857	No
4	POLD4	12822	609	1.619	0.0773	No
5	SELM	20967	720	1.509	0.0882	No
6	LMAN2	21454	774	1.455	0.1016	No
7	POLR2H	10888	779	1.450	0.1177	No
8	GPRC5B	17662	843	1.395	0.1299	No
9	RAB5C	20226	887	1.356	0.1427	No
10	PGF	21020	1054	1.230	0.1475	No
11	TCN2	20550	1166	1.158	0.1544	No
12	AGPS	14979	1381	1.008	0.1541	No
13	ESRRA	23802	1500	0.971	0.1586	No
14	GALK1	20147	1561	0.939	0.1659	No
15	HSPE1	9133	1756	0.828	0.1646	No
16	DMD	24295 2647	1963	0.710	0.1614	No
17	TMEM24	19150	2079	0.652	0.1625	No
18	SOD1	9846	2119	0.635	0.1675	No
19	TOMM70A	6608	2368	0.515	0.1598	No
20	MRPL11	23774	2428	0.495	0.1621	No
21	ZDHHC3	7598 12763	2434	0.493	0.1674	No
22	SCAMP3	15543	2565	0.442	0.1653	No
23	EEF1B2	4131 12063	2779	0.369	0.1578	No
24	F10	18682	2838	0.353	0.1587	No
25	KLK6	9231 9626	2971	0.316	0.1550	No
26	PRRX2	15047	3140	0.278	0.1490	No
27	HIP2	3626 3485 16838	3261	0.254	0.1454	No
28	BIN3	21969	3329	0.242	0.1445	No
29	CLDN10	21935 2785 2601 2720 7188	3492	0.215	0.1381	No
30	SOX5	9850 1044 5480 16937	3554	0.205	0.1371	No
31	SMOC1	21221	3835	0.171	0.1238	No
32	WNT3	20635	4109	0.141	0.1106	No
33	NR4A3	9473 16212 5183	4142	0.138	0.1104	No
34	GTF2I	16353 5491 9863 3280 3184	4155	0.137	0.1113	No
35	F12	3260 21453	4780	0.095	0.0785	No
36	FXYD1	17874 85	4860	0.092	0.0752	No
37	NR1H3	10258 2787	5262	0.075	0.0543	No
38	TLE1	5765 10185 15859	5375	0.072	0.0491	No
39	UBE2R2	16240	5466	0.069	0.0450	No
40	POU5F1	1547 23255	5511	0.067	0.0433	No
41	JMJD1C	11531 19996	5556	0.066	0.0417	No
42	TOM1L2	10115	5559	0.066	0.0423	No
43	OVOL1	23983	5603	0.065	0.0407	No
44	LMOD3	17059	5757	0.061	0.0331	No
45	GPR124	18643 918	5862	0.058	0.0281	No
46	CSF2	20454	5887	0.057	0.0274	No
47	PRODH2	1854 18300	5888	0.057	0.0281	No
48	PPARGC1A	16533	6137	0.051	0.0152	No
49	HOXB6	20688	6165	0.050	0.0143	No
50	LRRN1	17343	6276	0.048	0.0088	No
51	FOXA1	21060	6363	0.046	0.0047	No
52	NEUROG2	15426	6383	0.045	0.0042	No
53	GUCY2C	1140 16954	6417	0.045	0.0029	No
54	DAB2IP	12808 2692	6495	0.043	-0.0008	No
55	SEMA3B	5422	6572	0.042	-0.0045	No
56	SNAI1	14726	6817	0.037	-0.0173	No
57	USP12	5825 5824	6818	0.037	-0.0169	No
58	FGFR3	8969 3566	6996	0.035	-0.0261	No
59	CNTFR	2515 15906	7038	0.034	-0.0279	No
60	PPP1R14D	14471	7086	0.033	-0.0301	No
61	USH1C	1471 17821	7088	0.033	-0.0298	No
62	PDLIM7	7434	7180	0.032	-0.0344	No
63	PEX16	2681	7191	0.032	-0.0345	No
64	PFKFB1	9552	7345	0.029	-0.0425	No
65	PAK1IP1	21660	7567	0.026	-0.0542	No
66	PLEC1	2273 2198 2205 2178 2230 22247 2213 2231 2295 2172 5263 2266	7637	0.025	-0.0577	No
67	PDZK1	15490	7692	0.024	-0.0603	No
68	MSX1	16547	7714	0.024	-0.0612	No
69	GDNF	22514 2275	7809	0.022	-0.0661	No
70	ERBB3	19593	7882	0.021	-0.0697	No
71	PAPLN	9301	7913	0.021	-0.0711	No
72	HOXA3	9108 1075	7915	0.021	-0.0709	No
73	TTR	23615	8022	0.019	-0.0765	No
74	LCAT	18762	8410	0.015	-0.0973	No
75	TREH	19474	8414	0.015	-0.0973	No
76	PIPOX	20340	8616	0.013	-0.1081	No
77	FOXA3	17949	8662	0.012	-0.1104	No
78	TIMELESS	10177	8686	0.012	-0.1115	No
79	IRX6	7225	8737	0.011	-0.1141	No
80	PRDM16	12893	8809	0.011	-0.1178	No
81	GOLGA4	12022	9132	0.007	-0.1352	No
82	ERBB2	8913	9243	0.006	-0.1411	No
83	DNAJA2	12133 18806	9629	0.002	-0.1619	No
84	TNFRSF12A	23107	9919	-0.002	-0.1776	No
85	PAX7	15697	10053	-0.003	-0.1848	No
86	ADAMTS19	23544	10134	-0.004	-0.1891	No
87	STMN2	15638	10263	-0.005	-0.1959	No
88	HOXD3	9115	10347	-0.006	-0.2004	No
89	KCNE1L	24044	10506	-0.008	-0.2089	No
90	CKAP4	19663	10631	-0.009	-0.2155	No
91	NDUFS1	13940	10640	-0.009	-0.2158	No
92	SLC34A1	9824	10655	-0.009	-0.2165	No
93	NR2C1	10215	10670	-0.009	-0.2171	No
94	MPL	15780	10903	-0.012	-0.2296	No
95	IBRDC2	5747	10917	-0.012	-0.2301	No
96	MOBP	5112	10988	-0.013	-0.2338	No
97	MLLT6	20678	11145	-0.015	-0.2421	No
98	PRDM1	19775 3337	11162	-0.015	-0.2428	No
99	CLCNKA	15690	11301	-0.016	-0.2501	No
100	CDX1	23429	11372	-0.017	-0.2537	No
101	FABP1	17420	11830	-0.023	-0.2782	No
102	SCN1A	9784	11868	-0.024	-0.2800	No
103	EFEMP1	20937	11978	-0.025	-0.2856	No
104	SNAP25	5466	12150	-0.027	-0.2946	No
105	DUSP3	1358 13022	12297	-0.029	-0.3022	No
106	ARHGEF7	3823	12421	-0.031	-0.3085	No
107	ARHGEF12	19156	12493	-0.032	-0.3120	No
108	CRABP2	15554	12504	-0.032	-0.3122	No
109	TREX1	10219 3111	12675	-0.035	-0.3210	No
110	OTC	9518	12703	-0.035	-0.3220	No
111	LRP1	9284	12843	-0.038	-0.3292	No
112	EFNB3	20391	13374	-0.048	-0.3574	No
113	RQCD1	12205	13516	-0.051	-0.3644	No
114	PTPRG	22097 3151	13521	-0.051	-0.3641	No
115	PKLR	1850 15545	13808	-0.059	-0.3789	No
116	FBLN1	4716 2208	13826	-0.059	-0.3792	No
117	EGR3	4656	13898	-0.061	-0.3824	No
118	PURA	9670	14274	-0.073	-0.4019	No
119	PELO	8360	14521	-0.082	-0.4143	No
120	SLC39A5	3364 19596	14663	-0.089	-0.4210	No
121	GRK5	9036 23814	14825	-0.097	-0.4286	No
122	YBX2	20818	14922	-0.105	-0.4326	No
123	SPRY4	23448	14931	-0.106	-0.4319	No
124	PTHR1	5318 18985	15004	-0.111	-0.4345	No
125	DPF3	7659 12853	15192	-0.126	-0.4433	No
126	ZIC4	5992	15258	-0.132	-0.4453	No
127	SLC26A6	19304	15477	-0.156	-0.4554	No
128	TLK2	20628	15521	-0.160	-0.4559	No
129	MTMR4	20712	15544	-0.164	-0.4553	No
130	LGI4	18296	15600	-0.173	-0.4563	No
131	INSR	18950	15769	-0.203	-0.4632	No
132	MASP2	2547	15791	-0.207	-0.4620	No
133	SFRS6	14751	16039	-0.262	-0.4724	Yes
134	TTYH2	8585 4382 20605	16058	-0.266	-0.4704	Yes
135	SLC23A3	10367	16099	-0.277	-0.4695	Yes
136	SMYD5	17386	16189	-0.303	-0.4709	Yes
137	GATA4	21792 4755	16200	-0.306	-0.4681	Yes
138	HAGH	9020	16209	-0.307	-0.4651	Yes
139	CLCN2	22637	16288	-0.330	-0.4656	Yes
140	USP37	13923	16324	-0.341	-0.4637	Yes
141	MARK2	8899	16521	-0.412	-0.4697	Yes
142	NR2F6	4651 8876 18848 8912	16615	-0.444	-0.4698	Yes
143	HSD17B8	9061	16635	-0.451	-0.4657	Yes
144	NET1	7100	16719	-0.498	-0.4647	Yes
145	RBMS1	14580	16721	-0.499	-0.4591	Yes
146	SS18	6506 6505 2030	16747	-0.513	-0.4547	Yes
147	NPHP4	15978	16804	-0.537	-0.4518	Yes
148	SHMT1	5431	16818	-0.543	-0.4464	Yes
149	GTF3C2	7749	17120	-0.721	-0.4546	Yes
150	AHCYL1	6037	17216	-0.800	-0.4508	Yes
151	MAP3K11	11163	17263	-0.835	-0.4440	Yes
152	PRKCD	21897	17286	-0.851	-0.4356	Yes
153	DNAJB12	7146	17289	-0.854	-0.4262	Yes
154	MYH10	8077	17365	-0.915	-0.4200	Yes
155	PABPN1	12018	17408	-0.946	-0.4117	Yes
156	USP52	3397 19841	17522	-1.014	-0.4065	Yes
157	PSMF1	6009	17566	-1.048	-0.3971	Yes
158	HOXA5	17149	17569	-1.050	-0.3854	Yes
159	MAGMAS	1677 22678	17606	-1.083	-0.3752	Yes
160	EIF4EBP2	4662	17698	-1.180	-0.3670	Yes
161	ATP1B1	4420	17752	-1.235	-0.3560	Yes
162	PFN1	9555	17756	-1.238	-0.3423	Yes
163	ENO3	8905	17777	-1.259	-0.3293	Yes
164	SENP2	7990	17798	-1.280	-0.3160	Yes
165	NDST2	21906	17806	-1.288	-0.3020	Yes
166	EXOSC7	19256	17939	-1.431	-0.2931	Yes
167	HIBADH	17144	17956	-1.452	-0.2777	Yes
168	GBL	23091 1612	18005	-1.522	-0.2633	Yes
169	HSPD1	4078 9129	18026	-1.548	-0.2471	Yes
170	DCTN2	7635 12812	18067	-1.582	-0.2315	Yes
171	PAK4	17909	18131	-1.667	-0.2163	Yes
172	AP1B1	8599	18245	-1.884	-0.2013	Yes
173	PCTK1	24369	18357	-2.140	-0.1834	Yes
174	PRKCSH	19535	18426	-2.304	-0.1612	Yes
175	FKBP5	23051	18492	-2.579	-0.1359	Yes
176	ZBTB12	23268	18529	-2.888	-0.1055	Yes
177	DCTN1	1100 17392	18572	-3.406	-0.0696	Yes
178	TP53	20822	18610	-6.426	0.0003	Yes