Details for gene set V$AML

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	V$AML_Q6
Enrichment Score (ES)	-0.46856114
Normalized Enrichment Score (NES)	-1.356913
Nominal p-value	0.0028011205
FDR q-value	0.48828417
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RAG1	9689	78	2.899	0.0330	No
2	BCL6	22624	205	2.250	0.0550	No
3	BLOC1S1	3441 19586	213	2.228	0.0833	No
4	FLI1	4729	493	1.724	0.0902	No
5	MMP9	14732	834	1.402	0.0898	No
6	B3GNT5	22824	854	1.385	0.1065	No
7	SLC2A3	17010	933	1.314	0.1192	No
8	PGF	21020	1054	1.230	0.1284	No
9	HLX1	9093	1243	1.101	0.1324	No
10	PSCDBP	10442	1356	1.024	0.1394	No
11	TACSTD2	17126	1648	0.892	0.1351	No
12	PTK2B	21776	1979	0.701	0.1262	No
13	SREBF2	5509	1981	0.698	0.1351	No
14	RBL1	14373	2123	0.632	0.1355	No
15	ARMCX1	24253	2261	0.556	0.1352	No
16	LCK	15746	2404	0.501	0.1340	No
17	NHLRC2	23828	2445	0.488	0.1381	No
18	KCNN4	18353	2754	0.378	0.1262	No
19	AGPAT4	23384	2890	0.341	0.1233	No
20	XCL1	13781	2899	0.339	0.1272	No
21	CDYL	3195 4513 3287	3057	0.297	0.1225	No
22	CPNE1	11186	3068	0.295	0.1257	No
23	BATF	21200	3070	0.293	0.1294	No
24	GPX1	19310	3096	0.286	0.1317	No
25	PURG	7943	3324	0.242	0.1225	No
26	ETF1	23467	3389	0.232	0.1220	No
27	SOX5	9850 1044 5480 16937	3554	0.205	0.1158	No
28	RAMP2	20660	3901	0.161	0.0991	No
29	CD69	16979 8717	3986	0.153	0.0965	No
30	PIK3R1	3170	4146	0.138	0.0896	No
31	SLA	5449	4148	0.137	0.0913	No
32	PTPRS	1507 1565 1602 22928	4198	0.132	0.0904	No
33	BCAR3	15432	4253	0.127	0.0891	No
34	EREG	4679 16797	4331	0.121	0.0864	No
35	IL18RAP	14262	4523	0.110	0.0775	No
36	SHOX2	1802 5432	4632	0.104	0.0730	No
37	NGB	21016	4663	0.102	0.0726	No
38	IL17RE	434 17327 433 1049	4963	0.087	0.0575	No
39	WISP2	14745	4986	0.086	0.0574	No
40	CBL	19154	5233	0.076	0.0451	No
41	UBE2R2	16240	5466	0.069	0.0334	No
42	GDPD2	24280	5623	0.064	0.0257	No
43	BNC2	15850	5676	0.063	0.0237	No
44	PBX1	5224	5690	0.062	0.0238	No
45	TLX2	5773 1165	5734	0.061	0.0223	No
46	PCDHA1	8571 4368	5794	0.060	0.0198	No
47	CSF2	20454	5887	0.057	0.0156	No
48	PDLIM3	18625	5955	0.055	0.0126	No
49	MADD	2926 14526	6035	0.053	0.0090	No
50	BLR1	19145 3154	6050	0.053	0.0090	No
51	HOXB6	20688	6165	0.050	0.0034	No
52	TRPM8	9363	6216	0.049	0.0013	No
53	P2RY10	2613 24269	6420	0.045	-0.0091	No
54	IL17B	12074	6442	0.044	-0.0097	No
55	CREM	2005 1965 23496 1951	6453	0.044	-0.0097	No
56	FAIM2	13027	6573	0.042	-0.0156	No
57	CTSK	15506	6968	0.035	-0.0365	No
58	PHF6	2648 24340	6970	0.035	-0.0361	No
59	HPCAL1	21307 2123	7361	0.029	-0.0569	No
60	CCL2	9788	7519	0.026	-0.0651	No
61	PRKACA	18549 3844	7558	0.026	-0.0668	No
62	MEOX2	21285	7635	0.025	-0.0706	No
63	CHAD	20702	7781	0.023	-0.0782	No
64	SLC26A7	5538 2372	7828	0.022	-0.0804	No
65	FOXF2	21677	7897	0.021	-0.0838	No
66	GRAP2	5113 9398	7924	0.021	-0.0850	No
67	TGM4	11662	7947	0.020	-0.0859	No
68	NR4A1	9099	7970	0.020	-0.0869	No
69	WNT8B	23841	8034	0.019	-0.0900	No
70	ELAVL3	9136	8116	0.018	-0.0942	No
71	RNF40	6133	8150	0.018	-0.0958	No
72	ENTPD3	19266	8175	0.018	-0.0968	No
73	PITPNC1	7759	8278	0.017	-0.1022	No
74	OTP	21582	8333	0.016	-0.1049	No
75	CSMD3	10735 7938	8823	0.010	-0.1313	No
76	HAPLN3	17792	9135	0.007	-0.1481	No
77	KCNJ1	3121 12110	9272	0.006	-0.1554	No
78	ADD1	3615 4350 3590	9526	0.003	-0.1691	No
79	DUSP2	14865	9559	0.003	-0.1708	No
80	NR3C2	18562 13798	9628	0.002	-0.1744	No
81	CD28	14239 4092	9636	0.002	-0.1748	No
82	CRY1	19662	9653	0.002	-0.1757	No
83	HHIP	4849	9733	0.001	-0.1799	No
84	HEY1	15378	9852	-0.001	-0.1863	No
85	CALR	18814	9917	-0.002	-0.1898	No
86	CD6	3669 23740	10003	-0.003	-0.1944	No
87	NEK6	15018	10324	-0.006	-0.2116	No
88	SP6	8178 13678 13679	10366	-0.006	-0.2138	No
89	SCRN1	7649 12840	10418	-0.007	-0.2165	No
90	PAX1	9529	10521	-0.008	-0.2219	No
91	BMP7	14324	10622	-0.009	-0.2272	No
92	MKLN1	6584 11339	10695	-0.010	-0.2310	No
93	WNT7B	22172	10872	-0.012	-0.2404	No
94	DAB1	4594 8834	10940	-0.012	-0.2439	No
95	FOXP3	9804 5426	11007	-0.013	-0.2473	No
96	PAPPA	16190	11171	-0.015	-0.2559	No
97	BOC	22587	11459	-0.018	-0.2713	No
98	KPNB1	20274	11745	-0.022	-0.2865	No
99	LTBP3	5008 23785 9288	11938	-0.024	-0.2966	No
100	SFRS2	9807 20136	12015	-0.025	-0.3004	No
101	GABRA6	20491	12033	-0.026	-0.3010	No
102	ERG	1686 8915	12169	-0.027	-0.3079	No
103	CNNM4	14273	12191	-0.028	-0.3087	No
104	DLX5	17219 1058	12199	-0.028	-0.3087	No
105	SOST	20210	12301	-0.029	-0.3139	No
106	TBPL1	19805	12418	-0.031	-0.3197	No
107	CYGB	20139	12513	-0.032	-0.3244	No
108	RORC	9732	12608	-0.034	-0.3291	No
109	AGTRL1	14969	12611	-0.034	-0.3288	No
110	SULF1	6285	12630	-0.034	-0.3293	No
111	IL17F	13992	12741	-0.036	-0.3348	No
112	CAV1	8698	12742	-0.036	-0.3344	No
113	RUNX2	4480 8700	12860	-0.038	-0.3402	No
114	AP1G2	2677 21827	12929	-0.039	-0.3434	No
115	PI15	13586	13051	-0.042	-0.3494	No
116	PPP1R14C	8006 8007 3363	13185	-0.044	-0.3561	No
117	CREB5	10551	13249	-0.045	-0.3589	No
118	TRIB1	22467	13385	-0.048	-0.3656	No
119	MKL1	5864	13446	-0.050	-0.3682	No
120	BTG4	19456	13564	-0.052	-0.3739	No
121	ATP6V0A1	8640 4424 1197	13586	-0.053	-0.3744	No
122	RGMA	18213	13970	-0.063	-0.3944	No
123	OLIG3	20084	14030	-0.065	-0.3967	No
124	NRXN1	1581 1575 22875	14220	-0.071	-0.4061	No
125	TCF7	1467 20466	14232	-0.071	-0.4058	No
126	TAS1R1	15657	14586	-0.085	-0.4238	No
127	FLT1	3483 16287	14684	-0.090	-0.4279	No
128	ANXA8	22046	14712	-0.091	-0.4282	No
129	GRIN2D	9042	14738	-0.093	-0.4284	No
130	YBX2	20818	14922	-0.105	-0.4370	No
131	C1QTNF6	13063	15080	-0.117	-0.4440	No
132	ZIC4	5992	15258	-0.132	-0.4519	No
133	IL3	20453	15288	-0.135	-0.4517	No
134	SNTB2	3887 18476	15342	-0.141	-0.4528	No
135	ACIN1	3319 2807 21832	15351	-0.141	-0.4514	No
136	LIF	956 667 20960	15353	-0.141	-0.4497	No
137	PCSK4	19696 3296 3394 18705	15375	-0.144	-0.4490	No
138	HOXB5	20687	15386	-0.145	-0.4477	No
139	MYBPC2	17848	15452	-0.153	-0.4492	No
140	CCR1	18951	15473	-0.155	-0.4483	No
141	SPDEF	23055	15551	-0.166	-0.4504	No
142	RGS1	3970 6936	15581	-0.169	-0.4498	No
143	TBX5	3531 5634	15588	-0.172	-0.4479	No
144	PPP1R12C	6115 17987	15878	-0.224	-0.4607	No
145	RIN1	10349	16024	-0.258	-0.4653	Yes
146	DOK2	354	16030	-0.259	-0.4622	Yes
147	IL13	20461	16056	-0.266	-0.4601	Yes
148	SUPT16H	8541	16057	-0.266	-0.4567	Yes
149	PTPN7	11500	16073	-0.271	-0.4541	Yes
150	HOXB1	20684	16102	-0.277	-0.4520	Yes
151	GATA4	21792 4755	16200	-0.306	-0.4534	Yes
152	FGD1	24228	16229	-0.312	-0.4509	Yes
153	EYA1	4695 4061	16293	-0.331	-0.4501	Yes
154	CYR61	9159 15145 9311 5024	16397	-0.368	-0.4509	Yes
155	ATBF1	916 8633	16509	-0.410	-0.4517	Yes
156	EIF2B3	16118	16557	-0.426	-0.4488	Yes
157	TNFSF13	12806	16596	-0.437	-0.4452	Yes
158	MKRN3	17810	16651	-0.463	-0.4422	Yes
159	PCF11	121	16733	-0.505	-0.4401	Yes
160	H2AFY	21447	16783	-0.527	-0.4360	Yes
161	GALNT12	16214	16824	-0.544	-0.4312	Yes
162	MAP1LC3A	14774 2741	16836	-0.553	-0.4247	Yes
163	RBBP6	5365	16981	-0.632	-0.4244	Yes
164	ITGA10	15493	17000	-0.647	-0.4171	Yes
165	LUC7L	47 1520	17070	-0.694	-0.4119	Yes
166	POLG2	20180	17158	-0.748	-0.4070	Yes
167	RUNX1	4481	17175	-0.761	-0.3981	Yes
168	PER1	20827	17182	-0.767	-0.3886	Yes
169	SLC16A6	4186	17201	-0.783	-0.3795	Yes
170	ITGB7	22112	17234	-0.814	-0.3708	Yes
171	PAFAH1B1	1340 5220 9524	17497	-1.002	-0.3722	Yes
172	HOXB4	20686	17584	-1.062	-0.3632	Yes
173	TULP4	12740	17591	-1.066	-0.3499	Yes
174	GPD1	22361	17760	-1.242	-0.3430	Yes
175	DUSP1	23061	17895	-1.371	-0.3327	Yes
176	ABHD8	18847	17908	-1.387	-0.3156	Yes
177	ATP2A2	4421 3481	18034	-1.561	-0.3023	Yes
178	PTPN22	1775 15470	18055	-1.578	-0.2831	Yes
179	VIM	80	18085	-1.606	-0.2641	Yes
180	EVI2A	4690	18087	-1.609	-0.2435	Yes
181	TLN1	15899	18102	-1.621	-0.2234	Yes
182	GFI1	16451	18149	-1.695	-0.2042	Yes
183	EIF5A	11345 20379 6590	18169	-1.721	-0.1831	Yes
184	SDF2L1	22649	18344	-2.114	-0.1654	Yes
185	MSI2	8030 1268	18347	-2.118	-0.1384	Yes
186	IL7R	9175 4922	18371	-2.168	-0.1118	Yes
187	MAFG	5060	18420	-2.276	-0.0852	Yes
188	SEMA4A	15289	18434	-2.325	-0.0560	Yes
189	LIMK2	9278 1296	18462	-2.463	-0.0259	Yes
190	MPO	5116 20710 1324	18506	-2.663	0.0060	Yes