Details for gene set MRNA_PROCESSING

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	MRNA_PROCESSING_REACTOME
Enrichment Score (ES)	-0.53582126
Normalized Enrichment Score (NES)	-1.4129466
Nominal p-value	0.01010101
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TXNL4A	6567 11329	369	1.915	0.0031	No
2	CSTF2	24257	381	1.883	0.0252	No
3	HNRPH1	12222 1486 1220 7202 7201	597	1.629	0.0332	No
4	SNRPG	12622	599	1.629	0.0527	No
5	CUGBP2	4687 8923	623	1.608	0.0708	No
6	SFRS7	22889	625	1.605	0.0900	No
7	DDX20	15213	717	1.512	0.1033	No
8	CPSF2	21182	721	1.506	0.1213	No
9	DHX15	8842	794	1.437	0.1347	No
10	PRPF8	20780 1371	886	1.357	0.1461	No
11	NUDT21	12665	978	1.286	0.1566	No
12	DNAJC8	12712	1002	1.267	0.1706	No
13	LSM7	12286	1024	1.250	0.1845	No
14	HNRPL	18315	1161	1.161	0.1912	No
15	SRRM1	6958	1330	1.040	0.1946	No
16	SNRPB	9842 5469 2736	2070	0.655	0.1626	No
17	RBM17	13371	2135	0.624	0.1666	No
18	SF3B5	7256	2191	0.590	0.1707	No
19	PAPOLA	5261 9585	2635	0.420	0.1519	No
20	SF3B1	13954	2898	0.339	0.1418	No
21	POLR2A	5394	3001	0.310	0.1400	No
22	SF3A2	19938	3220	0.262	0.1314	No
23	SNRPD3	12514	3244	0.258	0.1333	No
24	CLK4	20895 1292	3500	0.214	0.1221	No
25	HNRPA3	6023 2712 10473 2683	3769	0.180	0.1097	No
26	SNRPA1	1373 18216	3820	0.173	0.1091	No
27	NONO	11993	3922	0.159	0.1056	No
28	RNGTT	10769 2354 6272	3993	0.152	0.1036	No
29	U2AF2	5813 5812 5814	4089	0.143	0.1002	No
30	PHF5A	22194	4981	0.087	0.0532	No
31	HNRPD	8645	5697	0.062	0.0153	No
32	RNPS1	9730 23361	5702	0.062	0.0158	No
33	CPSF3	7038	5815	0.059	0.0105	No
34	PRPF4	7655 12845	5978	0.055	0.0024	No
35	HNRPH2	12085 7082	6640	0.041	-0.0328	No
36	PRPF4B	3208 5295	6998	0.034	-0.0517	No
37	XRN2	2936 6302 2905	8194	0.017	-0.1160	No
38	SNRPN	1715 9844 5471	8300	0.016	-0.1215	No
39	CSTF3	10449 6002	8484	0.014	-0.1312	No
40	PTBP2	7074	8674	0.012	-0.1412	No
41	CUGBP1	2805 8819 4576 2924	8792	0.011	-0.1474	No
42	COL2A1	22145 4542	9899	-0.001	-0.2071	No
43	DHX9	8845 4608 3948	9969	-0.002	-0.2108	No
44	SNRPB2	5470	10248	-0.005	-0.2258	No
45	DHX16	23247	11120	-0.015	-0.2726	No
46	SFRS8	10543 6089	11309	-0.016	-0.2826	No
47	SFRS16	17943 3840	11715	-0.022	-0.3042	No
48	SFRS2	9807 20136	12015	-0.025	-0.3200	No
49	RBM5	13507 3016	12556	-0.033	-0.3488	No
50	HNRPR	13196 7909 2500	13199	-0.044	-0.3829	No
51	HNRPA2B1	1187 7001 7000 1040	14467	-0.080	-0.4504	No
52	CSTF1	12515	15107	-0.119	-0.4835	No
53	CSTF2T	13502	15127	-0.120	-0.4830	No
54	SNRPE	9843	15305	-0.137	-0.4909	No
55	U2AF1	8431	16014	-0.255	-0.5261	No
56	SFRS6	14751	16039	-0.262	-0.5243	No
57	METTL3	21841	16190	-0.303	-0.5287	No
58	HNRPU	6959	16236	-0.314	-0.5274	No
59	SNRPD1	23622	16359	-0.353	-0.5297	No
60	RNMT	7501	16434	-0.385	-0.5291	No
61	DDIT3	19857	16560	-0.426	-0.5307	Yes
62	HNRPC	9102 4859	16609	-0.442	-0.5280	Yes
63	DDX1	21104	16610	-0.442	-0.5227	Yes
64	FUSIP1	4715 16036	16764	-0.520	-0.5247	Yes
65	LSM2	23266	16814	-0.541	-0.5208	Yes
66	NCBP2	12643	16870	-0.571	-0.5169	Yes
67	CPSF4	16627	17028	-0.662	-0.5174	Yes
68	SF3A3	16091	17042	-0.669	-0.5101	Yes
69	SF3A1	7450	17139	-0.735	-0.5064	Yes
70	SNRPD2	8412	17154	-0.745	-0.4982	Yes
71	SFRS5	9808 2062	17174	-0.759	-0.4901	Yes
72	SNRPF	7645	17200	-0.782	-0.4821	Yes
73	SF4	18593	17247	-0.823	-0.4746	Yes
74	PPM1G	16571	17315	-0.879	-0.4677	Yes
75	SFRS10	9818 1722 5441	17393	-0.932	-0.4606	Yes
76	PABPN1	12018	17408	-0.946	-0.4500	Yes
77	SNRPA	7007 11992 7008	17418	-0.950	-0.4391	Yes
78	SPOP	5498	17466	-0.989	-0.4297	Yes
79	PRPF3	12899 12898 1877 7703	17500	-1.003	-0.4194	Yes
80	DHX8	20649	17510	-1.008	-0.4078	Yes
81	SFRS9	16731	17581	-1.059	-0.3988	Yes
82	HNRPAB	9104	17686	-1.173	-0.3903	Yes
83	SF3B4	22269	18038	-1.565	-0.3905	Yes
84	CD2BP2	17621	18125	-1.659	-0.3752	Yes
85	FUS	6135	18152	-1.696	-0.3562	Yes
86	SRPK2	5513	18161	-1.710	-0.3360	Yes
87	DICER1	20989	18195	-1.783	-0.3164	Yes
88	SUPT5H	9939	18222	-1.832	-0.2957	Yes
89	NXF1	11986	18309	-2.014	-0.2761	Yes
90	SRPK1	23049	18339	-2.104	-0.2524	Yes
91	SFRS14	10622	18343	-2.110	-0.2272	Yes
92	PTBP1	5303	18361	-2.154	-0.2022	Yes
93	CPSF1	22241	18418	-2.275	-0.1779	Yes
94	SNRP70	1186	18469	-2.504	-0.1504	Yes
95	SF3B2	23974	18543	-3.069	-0.1175	Yes
96	DHX38	48	18547	-3.101	-0.0803	Yes
97	CLK2	1883 15544	18575	-3.473	-0.0400	Yes
98	GIPC1	3841 3882 18552	18580	-3.506	0.0019	Yes