Details for gene set HSA04310_WNT_SIGNALING

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	HSA04310_WNT_SIGNALING_PATHWAY
Enrichment Score (ES)	-0.5031088
Normalized Enrichment Score (NES)	-1.3743987
Nominal p-value	0.0175
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	WNT10B	5874	2	5.814	0.0927	No
2	SMAD2	23511	864	1.376	0.0681	No
3	PRKCB1	1693 9574	1297	1.068	0.0618	No
4	NFATC1	23398 1999 5167 9455 1985 1957	1446	0.991	0.0696	No
5	CAMK2D	4232	1556	0.941	0.0788	No
6	CCND3	4489 4490	1557	0.941	0.0938	No
7	SMAD3	19084	1649	0.891	0.1031	No
8	AXIN2	20618	1729	0.842	0.1123	No
9	CACYBP	4468	1824	0.788	0.1198	No
10	BTRC	4459	1873	0.760	0.1293	No
11	TBL1X	5628	2137	0.623	0.1250	No
12	NKD2	7798	2167	0.605	0.1331	No
13	RUVBL1	7131 7130	2221	0.574	0.1394	No
14	APC	4396 2022	2338	0.526	0.1415	No
15	MAP3K7	16255	2546	0.451	0.1375	No
16	CAMK2A	2024 23541 1980	2586	0.432	0.1423	No
17	PPP2R1A	11951	2908	0.337	0.1303	No
18	PPP2CB	18636	2947	0.323	0.1334	No
19	RAC1	16302	3005	0.309	0.1353	No
20	CSNK2A1	14797	3073	0.293	0.1364	No
21	DVL2	20813	3517	0.211	0.1158	No
22	FBXW11	20926	3676	0.191	0.1103	No
23	LRP5	23948 9285	4008	0.151	0.0948	No
24	WNT5B	17022	4040	0.148	0.0954	No
25	PLCB2	5262	4054	0.147	0.0971	No
26	TCF7L2	10048 5646	4074	0.145	0.0984	No
27	WNT3	20635	4109	0.141	0.0988	No
28	FZD9	16345	4189	0.134	0.0966	No
29	SMAD4	5058	4275	0.126	0.0940	No
30	DKK1	23700	4659	0.103	0.0750	No
31	WNT2B	15214 1838	4681	0.101	0.0754	No
32	RAC2	22217	4775	0.096	0.0719	No
33	CTBP2	17591 1137	4842	0.092	0.0698	No
34	DAAM1	5536	5040	0.084	0.0605	No
35	SFRP1	9805	5437	0.070	0.0402	No
36	VANGL2	4109 8220	5796	0.060	0.0218	No
37	PPP3CA	1863 5284	6257	0.048	-0.0023	No
38	PSEN1	5297 2125 9630	6334	0.046	-0.0057	No
39	PRKACB	15140	6459	0.044	-0.0117	No
40	CSNK1A1	8204	6501	0.043	-0.0132	No
41	NKD1	8228	6597	0.041	-0.0177	No
42	MAPK10	11169	6603	0.041	-0.0173	No
43	PLCB4	9586	6893	0.036	-0.0324	No
44	WNT11	5876	6929	0.035	-0.0337	No
45	RHOA	8624 4409 4410	7462	0.027	-0.0620	No
46	PRKACA	18549 3844	7558	0.026	-0.0668	No
47	WNT2	17212	7603	0.025	-0.0687	No
48	PPP3R2	9612	7627	0.025	-0.0696	No
49	WNT9B	20193	7632	0.025	-0.0694	No
50	PPP2R2A	3222 21774	7792	0.023	-0.0776	No
51	FZD1	16923	7931	0.021	-0.0848	No
52	WNT8B	23841	8034	0.019	-0.0900	No
53	SOX17	14005	8214	0.017	-0.0994	No
54	CTBP1	16566	8222	0.017	-0.0995	No
55	FZD5	4743	8505	0.014	-0.1145	No
56	MYC	22465 9435	9165	0.007	-0.1501	No
57	FZD2	12179	9188	0.006	-0.1512	No
58	WNT7A	17068	9214	0.006	-0.1524	No
59	WNT4	16025	9305	0.005	-0.1572	No
60	PPARD	9606	9323	0.005	-0.1580	No
61	FOSL1	23779	9674	0.001	-0.1770	No
62	SFRP5	23674	10002	-0.003	-0.1946	No
63	FZD8	8990	10004	-0.003	-0.1946	No
64	SFRP4	9806	10083	-0.003	-0.1988	No
65	NFATC2	5168 2866	10190	-0.005	-0.2044	No
66	PPP3CB	5285	10275	-0.005	-0.2089	No
67	NFATC3	5169	10340	-0.006	-0.2123	No
68	WNT5A	22066 5880	10414	-0.007	-0.2161	No
69	CSNK2B	23008	10542	-0.008	-0.2228	No
70	WNT7B	22172	10872	-0.012	-0.2405	No
71	WNT3A	20431	11325	-0.017	-0.2646	No
72	FRAT2	23677	11549	-0.019	-0.2764	No
73	NFATC4	22002	11905	-0.024	-0.2952	No
74	PPP3R1	9611 489	12037	-0.026	-0.3019	No
75	DKK2	15418	12042	-0.026	-0.3017	No
76	FZD4	18193	12081	-0.026	-0.3033	No
77	WNT10A	14221	12134	-0.027	-0.3057	No
78	PLCB1	14832 2821	12286	-0.029	-0.3134	No
79	MMP7	19568	12331	-0.030	-0.3153	No
80	SFRP2	15564	12400	-0.031	-0.3185	No
81	WNT16	17512 1152	12580	-0.033	-0.3277	No
82	WNT9A	5709	12649	-0.035	-0.3308	No
83	RAC3	20561	12977	-0.040	-0.3478	No
84	APC2	10704	13023	-0.041	-0.3496	No
85	FZD10	13565 16693	13141	-0.043	-0.3553	No
86	WNT6	5881	13403	-0.048	-0.3686	No
87	WNT1	22371	13503	-0.051	-0.3731	No
88	CER1	15853	13887	-0.061	-0.3929	No
89	DVL1	2412 15960	13925	-0.062	-0.3939	No
90	DKK4	18653	13929	-0.062	-0.3931	No
91	PRICKLE2	10837	13975	-0.063	-0.3945	No
92	DAAM2	22945 176	14036	-0.065	-0.3967	No
93	VANGL1	6034	14186	-0.070	-0.4037	No
94	TCF7	1467 20466	14232	-0.071	-0.4049	No
95	CCND1	4487 4488 8707 17535	14255	-0.072	-0.4050	No
96	WNT8A	1978 23603	14332	-0.075	-0.4079	No
97	CAMK2G	21905	14362	-0.076	-0.4083	No
98	WIF1	19866	14406	-0.078	-0.4093	No
99	FZD3	21784	14422	-0.079	-0.4089	No
100	PORCN	24190	14522	-0.082	-0.4129	No
101	FRAT1	3681 23856	14885	-0.102	-0.4309	No
102	PPP2CA	20890	15002	-0.111	-0.4354	No
103	GSK3B	22761	15502	-0.158	-0.4599	No
104	FZD7	14242	15503	-0.158	-0.4573	No
105	MAPK9	1233 20903 1383	15505	-0.159	-0.4549	No
106	PRICKLE1	8379	15622	-0.176	-0.4583	No
107	DVL3	8873 22821	16191	-0.303	-0.4842	No
108	CAMK2B	20536	16235	-0.314	-0.4815	No
109	ROCK1	5386	16262	-0.322	-0.4778	No
110	AXIN1	1579 23330	16731	-0.504	-0.4951	Yes
111	PRKCA	20174	16737	-0.507	-0.4872	Yes
112	FZD6	22486	16773	-0.524	-0.4808	Yes
113	CSNK1E	6570 2211 11332	16889	-0.582	-0.4777	Yes
114	CUL1	17462	16891	-0.584	-0.4685	Yes
115	MAPK8	6459	16914	-0.593	-0.4602	Yes
116	LRP6	9286	17270	-0.837	-0.4660	Yes
117	ROCK2	21309 5387	17355	-0.908	-0.4560	Yes
118	CREBBP	22682 8783	17516	-1.011	-0.4486	Yes
119	PLCB3	23799	17555	-1.037	-0.4341	Yes
120	SENP2	7990	17798	-1.280	-0.4267	Yes
121	JUN	15832	18032	-1.559	-0.4144	Yes
122	NLK	5179 5178	18082	-1.602	-0.3915	Yes
123	CSNK2A2	4567 8808	18083	-1.602	-0.3659	Yes
124	CHD8	12581	18189	-1.768	-0.3434	Yes
125	LEF1	1860 15420	18218	-1.821	-0.3158	Yes
126	PPP3CC	21763	18241	-1.882	-0.2870	Yes
127	RBX1	12130 7123	18550	-3.114	-0.2539	Yes
128	NFAT5	3921 7037 12036	18552	-3.129	-0.2040	Yes
129	PRKX	9619 5290	18555	-3.145	-0.1539	Yes
130	CCND2	16987	18573	-3.414	-0.1003	Yes
131	TP53	20822	18610	-6.426	0.0003	Yes