DatasetSet_04_transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls
#transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls
#transDMproB_versus_DMpreB_repos
Phenotypephenotype_transDMproB_versus_DMpreB.cls#transDMproB_versus_DMpreB_repos
Upregulated in classDMpreB
GeneSetNUCLEAR_PART
Enrichment Score (ES)-0.5718669
Normalized Enrichment Score (NES)-1.6479467
Nominal p-value0.0
FDR q-value0.021477427
FWER p-Value0.352
Table: GSEA Results Summary



Fig 1: Enrichment plot: NUCLEAR_PART   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PPP1R9B20698548.5080.0088No
2H2AFY214472046.4390.0094No
3ARNTL181192206.3030.0173No
4SMARCD2135153505.2820.0175No
5HDAC7A221473705.1530.0236No
6ISG20182104284.8030.0270No
7REPIN1122204844.5280.0303No
8RALY2718 96905304.3790.0338No
9PSEN2137365574.2760.0383No
10TRIM273264 97207133.6660.0348No
11RGS1216872 35347203.6440.0395No
12XRCC62286 89917423.5900.0433No
13HCLS1227707813.5090.0461No
14LBR137328473.3210.0471No
15PARP18559 140278783.2440.0499No
16PPARGC1A165339253.1190.0517No
17SMARCA4195389303.1000.0557No
18LIG4114549353.0830.0597No
19FZR112107 196759663.0070.0622No
20TAF122537 16058 23389792.9910.0657No
21ASF1A200259862.9740.0695No
22ATXN12147710072.9180.0724No
23DDX112316911042.7010.0708No
24PHF1211192 648311072.6990.0745No
25MEN13716 938212302.4660.0712No
26SMAD4505812422.4370.0739No
27SENP2799013102.3050.0734No
28PURB533513252.2780.0758No
29RSF11818113302.2620.0787No
30PMF11245213822.1770.0789No
31TOP2A2025715351.9430.0732No
32TOP15790 5789 1021015481.9180.0752No
33MED122427715711.9000.0766No
34BNIP3L2177516001.8650.0776No
35NFYB517316071.8500.0798No
36RELA2378316121.8450.0822No
37JUN1583216701.7590.0815No
38ZNF3463163 6517 319316761.7540.0836No
39GTF3C2774916951.7320.0850No
40SMG611917161.7060.0863No
41WRN5882 1031517891.6340.0845No
42ARID1A8214 2501 1355417971.6330.0864No
43MRPL197086 708718041.6290.0883No
44RBM399316 503218851.5320.0860No
45DYRK1A464919001.5170.0874No
46TP532082219121.5070.0888No
47STAG31665219551.4540.0885No
48ZNF638947619631.4480.0901No
49DHCR71799920171.3890.0891No
50EDF12890 1222420181.3850.0911No
51RPL111245020681.3390.0902No
52NAP1L41754320851.3250.0912No
53EPC12039 8907 203321661.2560.0885No
54HDAC111735621691.2520.0901No
55MYO61936822311.1880.0884No
56GIT211174 646222561.1580.0887No
57DEDD2742922661.1470.0898No
58NDUFA13740023101.1080.0889No
59BRE3640 4226 1687923231.0960.0898No
60SF3B22397423341.0880.0907No
61CCNT122140 1160723491.0810.0914No
62HRB14208 406623741.0560.0916No
63EXOSC102482 1194324161.0150.0907No
64GTF3C110607 1764624650.9970.0895No
65SNRPA11373 1821624840.9860.0898No
66NOL62385 2405 15913 246625010.9690.0903No
67NPM21160225400.9310.0895No
68LRPPRC13031 2288325630.9060.0895No
69NUP5411231 11232 651625710.9010.0904No
70HIPK21718025740.8990.0915No
71HDAC1908125890.8850.0920No
72HDAC51480 2020526170.8560.0917No
73DULLARD2081626240.8500.0925No
74HNRPK9106 9105 3265 486126320.8410.0933No
75CHMP1A1063426860.7990.0915No
76RPS7976027450.7450.0893No
77TCOF1566027470.7420.0903No
78HNRPH112222 1486 1220 7202 720127580.7310.0907No
79CENPF1372327830.7090.0904No
80SMC38811 23815 8812 457128550.6460.0874No
81NFYA517229020.6130.0857No
82MPHOSPH12387829180.6040.0857No
83API58613 4400 861229200.6030.0865No
84SHFM11722029310.5930.0867No
85CHEK119181 308529600.5760.0860No
86KIN1512029930.5570.0850No
87NAP1L32426630110.5490.0848No
88RPL351236030200.5450.0851No
89ERCC46927 1192131070.4980.0811No
90HNRPDL11947 3551 695431210.4900.0811No
91SRP682014331410.4770.0807No
92ABL12693 4301 279431540.4670.0807No
93ZNF148594931910.4540.0793No
94TERT2160433690.3720.0701No
95PHF21A1494334010.3600.0689No
96NOD2638434190.3530.0684No
97RANGAP12180 2219534470.3420.0674No
98RB12175435420.3050.0627No
99CHAF1A2318836040.2830.0597No
100WTAP721536110.2810.0598No
101SMAD22351137410.2450.0530No
102NAP1L119882 3427 330 9485 519338800.2130.0457No
103NRM2325039620.1890.0415No
104TMPO577839640.1880.0417No
105RBBP55620 561940100.1780.0395No
106HNRPM1511 1337040450.1730.0379No
107PDCD71940240460.1730.0381No
108SMARCD12241 22360 225041390.1560.0333No
109ELF42416241990.1480.0302No
110U2AF25813 5812 581443190.1320.0239No
111PRPF820780 137143240.1310.0238No
112FGF184721 135143500.1270.0226No
113ACTL6A12136 13068 16662 3457 355444680.1120.0164No
114HNRPH212085 708246250.0930.0079No
115HNRPUL16118 17923 1608 10577 134547300.0840.0023No
116PAM522248430.076-0.0037No
117CLOCK8749 16507 453048850.074-0.0059No
118TEP12184949210.072-0.0077No
119GLIS28179 1350050020.068-0.0120No
120PITX215424 187850660.065-0.0154No
121PTGER315384 180351090.063-0.0176No
122HMGB21359451700.060-0.0208No
123MATR32043 508151860.059-0.0216No
124ATXN321001 205153510.052-0.0305No
125PAX82791 1467155260.045-0.0400No
126SAP301887155770.044-0.0427No
127DDX4717261 12577 113356270.042-0.0453No
128NUP1532147456810.041-0.0482No
129UBTF1313 1005257310.040-0.0508No
130RTN47569 1328 1343 144257730.039-0.0530No
131CDC23698558680.036-0.0581No
132ELP4809459870.033-0.0646No
133RTCD11518359970.033-0.0650No
134NF21222 516660280.032-0.0666No
135NLRP510743 1835860680.031-0.0687No
136NCR11840960820.031-0.0694No
137SNRPN1715 9844 547161070.030-0.0707No
138NPC1518761360.030-0.0722No
139ATRX10350 5922 262861940.028-0.0753No
140CBX522108 448562280.028-0.0771No
141SMARCD31244663670.025-0.0846No
142POLA12411268190.017-0.1094No
143TPR927 425568770.016-0.1125No
144GRINL1A1906468860.016-0.1129No
145SPTBN413471 110469800.014-0.1180No
146FIGLA1738370930.013-0.1241No
147TIMELESS1017772260.011-0.1314No
148HIF1A485073060.009-0.1357No
149ERCC21549 18363 381273840.008-0.1399No
150XRCC44238 843275320.006-0.1480No
151PHB955875820.005-0.1507No
152SREBF1988577260.003-0.1585No
153APTX2455 729178440.002-0.1650No
154SNRPB254708074-0.001-0.1776No
155ZBTB16106478159-0.002-0.1822No
156EPAS1231448210-0.003-0.1849No
157GUCY2F240458251-0.003-0.1871No
158UBE2I5819 58208287-0.004-0.1890No
159POLR3K12447 73728411-0.006-0.1958No
160CBX18704 190448477-0.006-0.1993No
161TAF76287 19688564-0.007-0.2041No
162EZH21092 171638583-0.008-0.2050No
163TAF4143198626-0.008-0.2073No
164NAP1L2240878641-0.009-0.2081No
165DHX8206498662-0.009-0.2092No
166HNRPF136078972-0.013-0.2261No
167NFYC94609047-0.014-0.2302No
168BCL28651 3928 13864 4435 981 4062 13863 40279115-0.015-0.2338No
169FMR1243219187-0.016-0.2377No
170RBPJ9709 3594 53709245-0.017-0.2408No
171PURA96709307-0.018-0.2442No
172DMC1222079720-0.024-0.2668No
173POLR2B1681710054-0.030-0.2850No
174DDX56698410093-0.030-0.2871No
175ZRSR22554 2639 2401310132-0.031-0.2891No
176FOXE31580110166-0.031-0.2909No
177OGG11733110204-0.032-0.2929No
178FOXC12167610275-0.033-0.2967No
179ELL2532910348-0.035-0.3006No
180NBN2485 16268 240810361-0.035-0.3012No
181EXOSC91561010484-0.037-0.3079No
182HDAC921084 213110553-0.038-0.3116No
183MPHOSPH101780510561-0.038-0.3119No
184POLQ13407 2276810704-0.040-0.3196No
185GCM11937210717-0.041-0.3202No
186ANAPC112056510787-0.042-0.3240No
187PTF1A1511010792-0.042-0.3241No
188WDR41629 1521 12190 717510866-0.044-0.3281No
189NPM1119610941-0.045-0.3321No
190BNIP31758111064-0.048-0.3387No
191DNMT3A2167 2133011106-0.048-0.3409No
192CPSF3703811212-0.051-0.3466No
193IPO7613011240-0.051-0.3480No
194PSEN15297 2125 963011264-0.052-0.3492No
195POLR3C1523511443-0.056-0.3589No
196TDG10107 570311470-0.056-0.3603No
197NUP5022403 9478 22402 216811483-0.057-0.3609No
198BRCA12021311755-0.064-0.3757No
199DNAJB9656511805-0.066-0.3783No
200TOPBP11065911806-0.066-0.3782No
201SP100548212335-0.086-0.4071No
202TAF93213 843312406-0.089-0.4108No
203NEK113099 1901612418-0.090-0.4113No
204TTN14552 2743 1455312463-0.092-0.4136No
205TERF2IP12184 18463 716712638-0.099-0.4230No
206SMARCA5821512643-0.099-0.4231No
207TOP2B579112667-0.100-0.4242No
208BUB1B1490812669-0.100-0.4241No
209GTF3C514638 268512681-0.101-0.4246No
210MDM219620 332712689-0.101-0.4248No
211XPO1417212880-0.112-0.4351No
212CDK86455 6456 3585 354212910-0.114-0.4366No
213IFI161374512919-0.114-0.4369No
214PRM2962112938-0.115-0.4377No
215SCRN17649 1284013090-0.124-0.4458No
216THRAP3606213225-0.134-0.4530No
217NKX2-52306013668-0.171-0.4771No
218TAF13828813683-0.173-0.4776No
219SNRPB9842 5469 273613755-0.181-0.4812No
220NOL42028 1143213758-0.181-0.4811No
221LRCH410544 609013831-0.188-0.4848No
222XRN22936 6302 290513854-0.190-0.4857No
223PML3015 3074 3020 527013923-0.197-0.4892No
224GTF2H14069 1823613978-0.204-0.4919No
225NUFIP12195514020-0.209-0.4939No
226NPAS2518614046-0.211-0.4949No
227LMNB123549 194314078-0.216-0.4964No
228ING21887714147-0.226-0.4998No
229HOXC102234214164-0.228-0.5003No
230HDAC62419714172-0.229-0.5004No
231RAD512897 1490314202-0.234-0.5017No
232NCOA62876 1438214241-0.239-0.5034No
233NOL318496 915 92114374-0.259-0.5103No
234SFRS2IP7794 1300914427-0.269-0.5128No
235HMGA12332314469-0.276-0.5147No
236ANAPC41684614580-0.302-0.5203No
237SMC2472414593-0.305-0.5206No
238ARID4A2080 621514683-0.328-0.5250No
239HTATIP369014713-0.337-0.5261No
240TAF6L592314780-0.351-0.5293No
241PTBP1530314798-0.355-0.5297No
242RAD501198 2046014815-0.361-0.5301No
243SFRS29807 2013614825-0.363-0.5301No
244SAP18540614898-0.383-0.5335No
245NCL5153 1389914974-0.407-0.5371No
246SNAPC41042415023-0.422-0.5392No
247TFIP111674615027-0.423-0.5387No
248HTATIP21823215028-0.423-0.5381No
249GNAZ7115030-0.424-0.5376No
250DEDD1405615180-0.485-0.5451No
251PTGES37101 1210215267-0.522-0.5491No
252RBM143673 1208715321-0.543-0.5513No
253EXOSC31589015354-0.564-0.5523No
254RPA12034915517-0.662-0.5603No
255PRPF31759415546-0.677-0.5609No
256NUP981772615569-0.693-0.5611No
257SMARCB11972815575-0.696-0.5605No
258RPP402149115703-0.786-0.5664No
259EMD2557 2430015722-0.805-0.5662No
260SF3B42226915726-0.807-0.5653No
261SMUG12210915743-0.818-0.5650No
262POLR2A539415814-0.870-0.5677No
263MSH3511915876-0.916-0.5698No
264COPS2455115915-0.949-0.5706Yes
265GTF2F11359915922-0.958-0.5696Yes
266ACTB8534 337 337 33815929-0.962-0.5686Yes
267HDAC22005515935-0.968-0.5675Yes
268SNW1728215941-0.972-0.5664Yes
269IVNS1ABP4384 405015957-0.984-0.5659Yes
270NR6A11459615971-0.993-0.5653Yes
271SMARCE11218 2025315982-0.995-0.5644Yes
272GEMIN612492 741515989-0.998-0.5634Yes
273SMC1A2572 24225 6279 1078016012-1.003-0.5632Yes
274RPA22330 1605716016-1.005-0.5620Yes
275RPL31133016039-1.016-0.5618Yes
276SNRPA7007 11992 700816045-1.019-0.5607Yes
277NUP62949716051-1.023-0.5595Yes
278HDAC3484416055-1.024-0.5583Yes
279TAF523833 5934 375916122-1.071-0.5604Yes
280CHEK216751 358716132-1.077-0.5595Yes
281HES613882 405816165-1.102-0.5597Yes
282PRICKLE1837916229-1.167-0.5616Yes
283ERCC514255 409716236-1.170-0.5603Yes
284DDX242084 2099516262-1.194-0.5600Yes
285POLH2296616266-1.195-0.5585Yes
286ASCC3L11486716299-1.230-0.5586Yes
287HDAC82409016307-1.236-0.5573Yes
288NUDT211266516330-1.253-0.5567Yes
289RANBP22001916336-1.259-0.5553Yes
290GEMIN71794416349-1.275-0.5542Yes
291POLI2341016378-1.309-0.5539Yes
292MSH623137 512016393-1.327-0.5529Yes
293DDX54777816463-1.418-0.5547Yes
294CDK91461916469-1.426-0.5530Yes
295DHX15884216474-1.430-0.5513Yes
296SLC29A22377516475-1.432-0.5493Yes
297BRCC39979 557816490-1.452-0.5480Yes
298EMG11016 1700516494-1.456-0.5462Yes
299BARD11393216513-1.472-0.5452Yes
300MORF4L21211816558-1.517-0.5455Yes
301SF3A1745016568-1.527-0.5439Yes
302INTS65184 12616607-1.558-0.5438Yes
303SNRPF764516611-1.562-0.5418Yes
304KPNA32179716656-1.591-0.5421Yes
305TBP671 155416689-1.625-0.5416Yes
306MED62102816707-1.640-0.5403Yes
307CDC26729416731-1.667-0.5392Yes
308POLR3H13460 813516747-1.684-0.5377Yes
309TXNL4A6567 1132916753-1.689-0.5357Yes
310KPNA12277616790-1.735-0.5353Yes
311FOXF22167716793-1.735-0.5330Yes
312SF3A31609116797-1.744-0.5307Yes
313SURF6994516806-1.759-0.5287Yes
314RPL361202416821-1.779-0.5271Yes
315TOPORS1592016898-1.882-0.5286Yes
316OIP52919 1446816908-1.901-0.5265Yes
317ILF21258216913-1.906-0.5241Yes
318TAF101078516990-2.022-0.5255Yes
319TAF616322 89117014-2.052-0.5239Yes
320CPSF12224117044-2.094-0.5226Yes
321SNRPG1262217069-2.131-0.5210Yes
322PPARGC1B931817086-2.155-0.5189Yes
323NARG17934 91717137-2.215-0.5186Yes
324BNIP2179 1938817146-2.222-0.5160Yes
325MCRS16961 6960 696217159-2.233-0.5136Yes
326NUP1333849 1871417164-2.237-0.5107Yes
327EED1775917174-2.248-0.5081Yes
328NXT11481417188-2.275-0.5057Yes
329YEATS41962117210-2.316-0.5037Yes
330SIP12126317216-2.327-0.5007Yes
331POLR2E3325 1969917221-2.334-0.4977Yes
332XPO712272 723917233-2.362-0.4951Yes
333NUTF212632 752917255-2.416-0.4929Yes
334SNRPD31251417260-2.426-0.4898Yes
335TAF111273317261-2.429-0.4864Yes
336SUMO15826 3943 1024717274-2.466-0.4837Yes
337SF3A21993817297-2.514-0.4814Yes
338ASH2L621217306-2.539-0.4784Yes
339ERCC32360517337-2.596-0.4764Yes
340POP12214 748217352-2.625-0.4736Yes
341ERCC11235 1045 164617375-2.658-0.4711Yes
342RUVBL17131 713017420-2.737-0.4698Yes
343CCNH732217431-2.762-0.4665Yes
344NUP8820365 131617438-2.774-0.4630Yes
345MED42196217452-2.814-0.4599Yes
346MSH22313817476-2.856-0.4572Yes
347RPS19539817490-2.882-0.4539Yes
348MRE11A3014 1956017526-2.959-0.4518Yes
349COIL2070817527-2.960-0.4477Yes
350CHAF1B2269417565-3.017-0.4456Yes
351KRR16989 331317567-3.021-0.4415Yes
352KPNA2924517572-3.032-0.4375Yes
353KLHL71690717593-3.064-0.4344Yes
354PHF5A2219417601-3.077-0.4305Yes
355GTF3C414635 652117627-3.125-0.4276Yes
356HSPD14078 912917647-3.193-0.4242Yes
357MPG2092917651-3.200-0.4200Yes
358FUSIP14715 1603617671-3.254-0.4165Yes
359GTF3C341817672-3.258-0.4121Yes
360DDX19B888817685-3.294-0.4082Yes
361ELP32178217698-3.321-0.4043Yes
362MCM31399117716-3.357-0.4006Yes
363HDAC102216517726-3.384-0.3964Yes
364SUV39H12419417743-3.415-0.3926Yes
365RPA31266717754-3.445-0.3884Yes
366GEMIN52043917765-3.478-0.3841Yes
367TIPIN3013 725817774-3.493-0.3797Yes
368POP71632917820-3.630-0.3772Yes
369KLHDC32295617831-3.644-0.3727Yes
370SNRP70118617836-3.659-0.3679Yes
371NUP1601495717870-3.756-0.3646Yes
372TUBG12066217890-3.827-0.3603Yes
373POLR2J1667217905-3.892-0.3557Yes
374SF3B31874617915-3.934-0.3508Yes
375U2AF1843117929-3.980-0.3460Yes
376PPIH1228717979-4.134-0.3430Yes
377SNRPD12362217992-4.171-0.3379Yes
378RPP302387717995-4.175-0.3323Yes
379NUP107833718011-4.236-0.3273Yes
380SMARCC19834 545918012-4.240-0.3214Yes
381SNUPN1228218019-4.259-0.3159Yes
382ANAPC512221 359718024-4.277-0.3102Yes
383AAAS22111 227418068-4.474-0.3064Yes
384ASNA11881018070-4.491-0.3003Yes
385LMO41515118076-4.510-0.2943Yes
386SNRPD2841218097-4.591-0.2891Yes
387GEMIN46592 659118100-4.595-0.2829Yes
388BCAS21266218131-4.707-0.2780Yes
389BNIP12332518139-4.733-0.2719Yes
390RCC11573518160-4.818-0.2663Yes
391WDHD12185918202-4.961-0.2618Yes
392RAE11239518206-4.967-0.2551Yes
393MCM79372 356818211-4.973-0.2484Yes
394TIMM501791118220-5.003-0.2420Yes
395GTF2H42299918223-5.009-0.2352Yes
396NSUN22161018231-5.036-0.2286Yes
397RPP381469818232-5.043-0.2217Yes
398LSM41858318257-5.121-0.2159Yes
399NOL18472 1728018263-5.132-0.2091Yes
400KPNB12027418273-5.185-0.2025Yes
401ERCC812982 3255 318718284-5.234-0.1958Yes
402CDKN2A2491 1584118308-5.383-0.1897Yes
403CIB11778018361-5.707-0.1847Yes
404EFTUD21219 2020318369-5.754-0.1771Yes
405RANBP52193018375-5.778-0.1694Yes
406IKBKAP2540 604518387-5.885-0.1619Yes
407NOLC1770418389-5.942-0.1538Yes
408EIF5A11345 20379 659018392-5.951-0.1457Yes
409NOLA31491418401-6.008-0.1378Yes
410NOL5A1247418420-6.093-0.1304Yes
411EXOSC11237918434-6.213-0.1226Yes
412RUVBL2976618447-6.380-0.1144Yes
413MYBBP1A5217 1232 521618476-6.687-0.1068Yes
414DDX211975118501-6.981-0.0985Yes
415SDAD11647918526-7.222-0.0898Yes
416PCGF62365018551-7.748-0.0805Yes
417LYAR1685618565-8.120-0.0700Yes
418GNL321894 335618570-8.174-0.0589Yes
419MKI67IP750918572-8.216-0.0477Yes
420CIRH1A1847818578-8.378-0.0364Yes
421RRP91932818599-9.150-0.0249Yes
422POLR1E722618600-9.216-0.0122Yes
423NOLA21197218603-9.4260.0007Yes
Table: GSEA details [plain text format]



Fig 2: NUCLEAR_PART   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NUCLEAR_PART: Random ES distribution   
Gene set null distribution of ES for NUCLEAR_PART