Details for gene set MEMBRANE_ENCLOSED

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB_repos
Phenotype	phenotype_transDMproB_versus_DMpreB.cls#transDMproB_versus_DMpreB_repos
Upregulated in class	DMpreB
GeneSet	MEMBRANE_ENCLOSED_LUMEN
Enrichment Score (ES)	-0.59555143
Normalized Enrichment Score (NES)	-1.6904153
Nominal p-value	0.0
FDR q-value	0.016240424
FWER p-Value	0.162

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PPP1R9B	20698	54	8.508	0.0113	No
2	TAP2	23282	140	7.135	0.0187	No
3	ARNTL	18119	220	6.303	0.0249	No
4	SMARCD2	13515	350	5.282	0.0268	No
5	HDAC7A	22147	370	5.153	0.0344	No
6	ISG20	18210	428	4.803	0.0393	No
7	TRIM27	3264 9720	713	3.666	0.0300	No
8	XRCC6	2286 8991	742	3.590	0.0345	No
9	HCLS1	22770	781	3.509	0.0383	No
10	PARP1	8559 14027	878	3.244	0.0385	No
11	PPARGC1A	16533	925	3.119	0.0412	No
12	SMARCA4	19538	930	3.100	0.0462	No
13	ETFB	18279	960	3.019	0.0497	No
14	TAF12	2537 16058 2338	979	2.991	0.0537	No
15	ASF1A	20025	986	2.974	0.0584	No
16	ATXN1	21477	1007	2.918	0.0622	No
17	DDX11	23169	1104	2.701	0.0615	No
18	PHF12	11192 6483	1107	2.699	0.0659	No
19	MEN1	3716 9382	1230	2.466	0.0634	No
20	SMAD4	5058	1242	2.437	0.0669	No
21	RSF1	18181	1330	2.262	0.0659	No
22	PMF1	12452	1382	2.177	0.0668	No
23	TOP2A	20257	1535	1.943	0.0617	No
24	TOP1	5790 5789 10210	1548	1.918	0.0643	No
25	MED12	24277	1571	1.900	0.0663	No
26	NFYB	5173	1607	1.850	0.0675	No
27	RELA	23783	1612	1.845	0.0704	No
28	ZNF346	3163 6517 3193	1676	1.754	0.0699	No
29	GTF3C2	7749	1695	1.732	0.0718	No
30	WRN	5882 10315	1789	1.634	0.0694	No
31	ARID1A	8214 2501 13554	1797	1.633	0.0718	No
32	RBM39	9316 5032	1885	1.532	0.0696	No
33	DYRK1A	4649	1900	1.517	0.0714	No
34	TP53	20822	1912	1.507	0.0733	No
35	HSP90B1	19657	1958	1.452	0.0733	No
36	ZNF638	9476	1963	1.448	0.0755	No
37	EDF1	2890 12224	2018	1.385	0.0749	No
38	RPL11	12450	2068	1.339	0.0745	No
39	NAP1L4	17543	2085	1.325	0.0758	No
40	EPC1	2039 8907 2033	2166	1.256	0.0736	No
41	HDAC11	17356	2169	1.252	0.0755	No
42	MYO6	19368	2231	1.188	0.0742	No
43	GIT2	11174 6462	2256	1.158	0.0748	No
44	DEDD2	7429	2266	1.147	0.0763	No
45	NDUFA13	7400	2310	1.108	0.0758	No
46	CCNT1	22140 11607	2349	1.081	0.0755	No
47	EXOSC10	2482 11943	2416	1.015	0.0736	No
48	GTF3C1	10607 17646	2465	0.997	0.0727	No
49	NOL6	2385 2405 15913 2466	2501	0.969	0.0724	No
50	NUP54	11231 11232 6516	2571	0.901	0.0701	No
51	HIPK2	17180	2574	0.899	0.0715	No
52	HDAC1	9081	2589	0.885	0.0722	No
53	HDAC5	1480 20205	2617	0.856	0.0722	No
54	HNRPK	9106 9105 3265 4861	2632	0.841	0.0729	No
55	CHMP1A	10634	2686	0.799	0.0713	No
56	RPS7	9760	2745	0.745	0.0694	No
57	TCOF1	5660	2747	0.742	0.0706	No
58	CENPF	13723	2783	0.709	0.0698	No
59	SMC3	8811 23815 8812 4571	2855	0.646	0.0670	No
60	ETFA	4292 8495 3155	2860	0.644	0.0679	No
61	NFYA	5172	2902	0.613	0.0667	No
62	MPHOSPH1	23878	2918	0.604	0.0669	No
63	SHFM1	17220	2931	0.593	0.0672	No
64	KIN	15120	2993	0.557	0.0648	No
65	NAP1L3	24266	3011	0.549	0.0648	No
66	RPL35	12360	3020	0.545	0.0653	No
67	SRP68	20143	3141	0.477	0.0595	No
68	ABL1	2693 4301 2794	3154	0.467	0.0597	No
69	ZNF148	5949	3191	0.454	0.0585	No
70	PHF21A	14943	3401	0.360	0.0476	No
71	OPA1	13169 22800 7894	3533	0.307	0.0410	No
72	RB1	21754	3542	0.305	0.0411	No
73	NR3C1	9043	3543	0.304	0.0416	No
74	CHAF1A	23188	3604	0.283	0.0388	No
75	SMAD2	23511	3741	0.245	0.0317	No
76	TFB2M	4024 9092 4083	3843	0.221	0.0266	No
77	NAP1L1	19882 3427 330 9485 5193	3880	0.213	0.0250	No
78	RBBP5	5620 5619	4010	0.178	0.0182	No
79	SMARCD1	2241 22360 2250	4139	0.156	0.0115	No
80	ELF4	24162	4199	0.148	0.0085	No
81	HSD3B2	4873 4874 15229 4875 9126	4323	0.132	0.0020	No
82	FGF18	4721 1351	4350	0.127	0.0008	No
83	ACTL6A	12136 13068 16662 3457 3554	4468	0.112	-0.0054	No
84	HS3ST1	16542	4604	0.095	-0.0126	No
85	CLOCK	8749 16507 4530	4885	0.074	-0.0278	No
86	TEP1	21849	4921	0.072	-0.0296	No
87	GLIS2	8179 13500	5002	0.068	-0.0339	No
88	PITX2	15424 1878	5066	0.065	-0.0372	No
89	ATXN3	21001 2051	5351	0.052	-0.0527	No
90	PAX8	2791 14671	5526	0.045	-0.0621	No
91	SAP30	18871	5577	0.044	-0.0648	No
92	DDX47	17261 12577 1133	5627	0.042	-0.0674	No
93	UBTF	1313 10052	5731	0.040	-0.0729	No
94	DBT	1770 4599	5915	0.035	-0.0829	No
95	ELP4	8094	5987	0.033	-0.0867	No
96	RTCD1	15183	5997	0.033	-0.0871	No
97	NF2	1222 5166	6028	0.032	-0.0887	No
98	NLRP5	10743 18358	6068	0.031	-0.0908	No
99	NCR1	18409	6082	0.031	-0.0915	No
100	SMARCD3	12446	6367	0.025	-0.1070	No
101	POLA1	24112	6819	0.017	-0.1316	No
102	SPTBN4	13471 1104	6980	0.014	-0.1403	No
103	FIGLA	17383	7093	0.013	-0.1464	No
104	HIF1A	4850	7306	0.009	-0.1580	No
105	ERCC2	1549 18363 3812	7384	0.008	-0.1622	No
106	GATM	14451	7489	0.007	-0.1679	No
107	PHB	9558	7582	0.005	-0.1729	No
108	MRPS22	19031	7628	0.005	-0.1754	No
109	APTX	2455 7291	7844	0.002	-0.1871	No
110	ZBTB16	10647	8159	-0.002	-0.2043	No
111	EPAS1	23144	8210	-0.003	-0.2070	No
112	UBE2I	5819 5820	8287	-0.004	-0.2112	No
113	POLR3K	12447 7372	8411	-0.006	-0.2179	No
114	CBX1	8704 19044	8477	-0.006	-0.2214	No
115	TAF7	6287 1968	8564	-0.007	-0.2261	No
116	EZH2	1092 17163	8583	-0.008	-0.2271	No
117	TAF4	14319	8626	-0.008	-0.2294	No
118	NDUFS1	13940	8627	-0.008	-0.2293	No
119	NAP1L2	24087	8641	-0.009	-0.2300	No
120	CALR	18814	8684	-0.009	-0.2323	No
121	RCN1	9710	8788	-0.011	-0.2379	No
122	NFYC	9460	9047	-0.014	-0.2520	No
123	FMR1	24321	9187	-0.016	-0.2596	No
124	MRPS36	7257	9202	-0.017	-0.2603	No
125	RBPJ	9709 3594 5370	9245	-0.017	-0.2626	No
126	PITRM1	21710	9343	-0.019	-0.2679	No
127	POLR2B	16817	10054	-0.030	-0.3067	No
128	DDX56	6984	10093	-0.030	-0.3087	No
129	FOXE3	15801	10166	-0.031	-0.3126	No
130	OGG1	17331	10204	-0.032	-0.3145	No
131	ELL2	5329	10348	-0.035	-0.3223	No
132	EXOSC9	15610	10484	-0.037	-0.3296	No
133	HDAC9	21084 2131	10553	-0.038	-0.3333	No
134	MPHOSPH10	17805	10561	-0.038	-0.3336	No
135	POLQ	13407 22768	10704	-0.040	-0.3413	No
136	GCM1	19372	10717	-0.041	-0.3419	No
137	PTF1A	15110	10792	-0.042	-0.3459	No
138	WDR4	1629 1521 12190 7175	10866	-0.044	-0.3498	No
139	NPM1	1196	10941	-0.045	-0.3537	No
140	BNIP3	17581	11064	-0.048	-0.3603	No
141	DNMT3A	2167 21330	11106	-0.048	-0.3625	No
142	CPSF3	7038	11212	-0.051	-0.3682	No
143	POLR3C	15235	11443	-0.056	-0.3806	No
144	TDG	10107 5703	11470	-0.056	-0.3820	No
145	DNAJB9	6565	11805	-0.066	-0.4001	No
146	TOPBP1	10659	11806	-0.066	-0.4000	No
147	MBTPS1	18730 3809 3770	12260	-0.082	-0.4246	No
148	SP100	5482	12335	-0.086	-0.4285	No
149	TAF9	3213 8433	12406	-0.089	-0.4322	No
150	NEK11	3099 19016	12418	-0.090	-0.4327	No
151	SMARCA5	8215	12643	-0.099	-0.4448	No
152	TOP2B	5791	12667	-0.100	-0.4458	No
153	GTF3C5	14638 2685	12681	-0.101	-0.4464	No
154	MDM2	19620 3327	12689	-0.101	-0.4466	No
155	XPO1	4172	12880	-0.112	-0.4568	No
156	CDK8	6455 6456 3585 3542	12910	-0.114	-0.4582	No
157	IFI16	13745	12919	-0.114	-0.4584	No
158	PRM2	9621	12938	-0.115	-0.4592	No
159	THRAP3	6062	13225	-0.134	-0.4747	No
160	TIMM23	7004 5768	13546	-0.160	-0.4919	No
161	NKX2-5	23060	13668	-0.171	-0.4982	No
162	TAF13	8288	13683	-0.173	-0.4987	No
163	NOL4	2028 11432	13758	-0.181	-0.5024	No
164	LRCH4	10544 6090	13831	-0.188	-0.5060	No
165	CASQ1	13752 8695	13835	-0.189	-0.5059	No
166	XRN2	2936 6302 2905	13854	-0.190	-0.5066	No
167	PML	3015 3074 3020 5270	13923	-0.197	-0.5099	No
168	GTF2H1	4069 18236	13978	-0.204	-0.5126	No
169	NUFIP1	21955	14020	-0.209	-0.5145	No
170	NPAS2	5186	14046	-0.211	-0.5155	No
171	ING2	18877	14147	-0.226	-0.5206	No
172	HDAC6	24197	14172	-0.229	-0.5215	No
173	NCOA6	2876 14382	14241	-0.239	-0.5248	No
174	NFS1	2903 14377	14320	-0.249	-0.5286	No
175	NOL3	18496 915 921	14374	-0.259	-0.5311	No
176	SFRS2IP	7794 13009	14427	-0.269	-0.5335	No
177	HMGA1	23323	14469	-0.276	-0.5353	No
178	HSD3B1	15227	14654	-0.318	-0.5448	No
179	ARID4A	2080 6215	14683	-0.328	-0.5458	No
180	HTATIP	3690	14713	-0.337	-0.5468	No
181	TAF6L	5923	14780	-0.351	-0.5498	No
182	PTBP1	5303	14798	-0.355	-0.5502	No
183	SFRS2	9807 20136	14825	-0.363	-0.5510	No
184	SAP18	5406	14898	-0.383	-0.5543	No
185	NCL	5153 13899	14974	-0.407	-0.5577	No
186	SNAPC4	10424	15023	-0.422	-0.5596	No
187	TFIP11	16746	15027	-0.423	-0.5591	No
188	DEDD	14056	15180	-0.485	-0.5665	No
189	RBM14	3673 12087	15321	-0.543	-0.5733	No
190	RPA1	20349	15517	-0.662	-0.5828	No
191	PRPF31	7594	15546	-0.677	-0.5832	No
192	NUP98	17726	15569	-0.693	-0.5833	No
193	SMARCB1	19728	15575	-0.696	-0.5824	No
194	RPP40	21491	15703	-0.786	-0.5880	No
195	SMUG1	22109	15743	-0.818	-0.5888	No
196	GRPEL1	16863	15746	-0.819	-0.5875	No
197	POLR2A	5394	15814	-0.870	-0.5897	No
198	GTF2F1	13599	15922	-0.958	-0.5939	Yes
199	ACTB	8534 337 337 338	15929	-0.962	-0.5927	Yes
200	HDAC2	20055	15935	-0.968	-0.5913	Yes
201	MRPL51	12361 7301	15947	-0.980	-0.5903	Yes
202	IVNS1ABP	4384 4050	15957	-0.984	-0.5891	Yes
203	NR6A1	14596	15971	-0.993	-0.5881	Yes
204	SMARCE1	1218 20253	15982	-0.995	-0.5870	Yes
205	GEMIN6	12492 7415	15989	-0.998	-0.5857	Yes
206	DNAJA3	1732 13518	16014	-1.005	-0.5853	Yes
207	RPL3	11330	16039	-1.016	-0.5849	Yes
208	HDAC3	4844	16055	-1.024	-0.5840	Yes
209	TAF5	23833 5934 3759	16122	-1.071	-0.5858	Yes
210	CHEK2	16751 3587	16132	-1.077	-0.5845	Yes
211	HES6	13882 4058	16165	-1.102	-0.5844	Yes
212	TRPC4AP	14379 12125	16230	-1.167	-0.5859	Yes
213	ERCC5	14255 4097	16236	-1.170	-0.5842	Yes
214	DDX24	2084 20995	16262	-1.194	-0.5836	Yes
215	POLH	22966	16266	-1.195	-0.5818	Yes
216	PIN4	12817	16277	-1.204	-0.5803	Yes
217	HDAC8	24090	16307	-1.236	-0.5798	Yes
218	NUDT21	12665	16330	-1.253	-0.5789	Yes
219	GEMIN7	17944	16349	-1.275	-0.5777	Yes
220	CS	19839	16370	-1.292	-0.5767	Yes
221	MRPS16	12311	16374	-1.296	-0.5746	Yes
222	POLI	23410	16378	-1.309	-0.5726	Yes
223	TXNDC4	15886	16424	-1.354	-0.5728	Yes
224	DDX54	7778	16463	-1.418	-0.5725	Yes
225	CDK9	14619	16469	-1.426	-0.5704	Yes
226	SLC29A2	23775	16475	-1.432	-0.5682	Yes
227	EMG1	1016 17005	16494	-1.456	-0.5668	Yes
228	MORF4L2	12118	16558	-1.517	-0.5677	Yes
229	INTS6	5184 126	16607	-1.558	-0.5677	Yes
230	MRPS10	7229 12261 23212	16639	-1.580	-0.5667	Yes
231	TBP	671 1554	16689	-1.625	-0.5667	Yes
232	MRPS21	12323	16701	-1.635	-0.5645	Yes
233	MED6	21028	16707	-1.640	-0.5620	Yes
234	MRPS18C	12728	16744	-1.680	-0.5612	Yes
235	POLR3H	13460 8135	16747	-1.684	-0.5585	Yes
236	NDUFAB1	7667	16758	-1.695	-0.5562	Yes
237	FOXF2	21677	16793	-1.735	-0.5551	Yes
238	SURF6	9945	16806	-1.759	-0.5528	Yes
239	MRPS35	17237 1068	16809	-1.766	-0.5500	Yes
240	RPL36	12024	16821	-1.779	-0.5476	Yes
241	TOPORS	15920	16898	-1.882	-0.5486	Yes
242	HTRA2	1122 17103	16900	-1.885	-0.5455	Yes
243	OIP5	2919 14468	16908	-1.901	-0.5426	Yes
244	ILF2	12582	16913	-1.906	-0.5397	Yes
245	TAF10	10785	16990	-2.022	-0.5404	Yes
246	BCKDK	18061 1391	16992	-2.023	-0.5371	Yes
247	TAF6	16322 891	17014	-2.052	-0.5348	Yes
248	CPSF1	22241	17044	-2.094	-0.5328	Yes
249	PPARGC1B	9318	17086	-2.155	-0.5315	Yes
250	NARG1	7934 917	17137	-2.215	-0.5305	Yes
251	MCRS1	6961 6960 6962	17159	-2.233	-0.5279	Yes
252	EED	17759	17174	-2.248	-0.5249	Yes
253	YEATS4	19621	17210	-2.316	-0.5229	Yes
254	POLR2E	3325 19699	17221	-2.334	-0.5195	Yes
255	MRPS11	12621 3150	17230	-2.360	-0.5160	Yes
256	TAF11	12733	17261	-2.429	-0.5135	Yes
257	BCKDHA	17925	17270	-2.461	-0.5099	Yes
258	ATP5F1	15212	17289	-2.498	-0.5066	Yes
259	ASH2L	6212	17306	-2.539	-0.5033	Yes
260	ERCC3	23605	17337	-2.596	-0.5005	Yes
261	POP1	2214 7482	17352	-2.625	-0.4969	Yes
262	ACADM	15133 1800	17363	-2.641	-0.4930	Yes
263	MRPL23	9738	17399	-2.705	-0.4904	Yes
264	ALDH4A1	16011	17419	-2.736	-0.4868	Yes
265	RUVBL1	7131 7130	17420	-2.737	-0.4822	Yes
266	MRPL52	22019	17440	-2.777	-0.4786	Yes
267	MED4	21962	17452	-2.814	-0.4745	Yes
268	RPS19	5398	17490	-2.882	-0.4716	Yes
269	MRE11A	3014 19560	17526	-2.959	-0.4686	Yes
270	COIL	20708	17527	-2.960	-0.4636	Yes
271	CHAF1B	22694	17565	-3.017	-0.4606	Yes
272	KRR1	6989 3313	17567	-3.021	-0.4555	Yes
273	KPNA2	9245	17572	-3.032	-0.4507	Yes
274	KLHL7	16907	17593	-3.064	-0.4466	Yes
275	TIMM44	3858 18941	17617	-3.101	-0.4427	Yes
276	MRPS15	2442 12345	17622	-3.113	-0.4377	Yes
277	GTF3C4	14635 6521	17627	-3.125	-0.4326	Yes
278	MPG	20929	17651	-3.200	-0.4285	Yes
279	FUSIP1	4715 16036	17671	-3.254	-0.4241	Yes
280	GTF3C3	418	17672	-3.258	-0.4186	Yes
281	ELP3	21782	17698	-3.321	-0.4144	Yes
282	HDAC10	22165	17726	-3.384	-0.4102	Yes
283	BCKDHB	19365	17764	-3.478	-0.4064	Yes
284	GEMIN5	20439	17765	-3.478	-0.4005	Yes
285	POLG2	20180	17787	-3.522	-0.3958	Yes
286	POP7	16329	17820	-3.630	-0.3914	Yes
287	MRPL10	20681	17825	-3.634	-0.3855	Yes
288	POLR2J	16672	17905	-3.892	-0.3833	Yes
289	U2AF1	8431	17929	-3.980	-0.3779	Yes
290	MRPL55	20864	17975	-4.120	-0.3734	Yes
291	RPP30	23877	17995	-4.175	-0.3674	Yes
292	SMARCC1	9834 5459	18012	-4.240	-0.3612	Yes
293	MRPS24	12262	18047	-4.372	-0.3557	Yes
294	MRPS28	15377	18050	-4.384	-0.3484	Yes
295	MRPL40	22641	18062	-4.439	-0.3416	Yes
296	ASNA1	18810	18070	-4.491	-0.3344	Yes
297	LMO4	15151	18076	-4.510	-0.3271	Yes
298	SEP15	13527 1895 15398	18082	-4.516	-0.3198	Yes
299	GEMIN4	6592 6591	18100	-4.595	-0.3130	Yes
300	MRPS12	17907 6273	18148	-4.773	-0.3076	Yes
301	ACN9	12920	18187	-4.909	-0.3014	Yes
302	WDHD1	21859	18202	-4.961	-0.2938	Yes
303	MCM7	9372 3568	18211	-4.973	-0.2859	Yes
304	TIMM50	17911	18220	-5.003	-0.2780	Yes
305	GTF2H4	22999	18223	-5.009	-0.2696	Yes
306	NSUN2	21610	18231	-5.036	-0.2616	Yes
307	RPP38	14698	18232	-5.043	-0.2531	Yes
308	NOL1	8472 17280	18263	-5.132	-0.2461	Yes
309	SUPV3L1	11677	18264	-5.146	-0.2375	Yes
310	CYCS	8821	18278	-5.207	-0.2294	Yes
311	ERCC8	12982 3255 3187	18284	-5.234	-0.2209	Yes
312	MRPS18A	23222	18299	-5.322	-0.2127	Yes
313	CDKN2A	2491 15841	18308	-5.383	-0.2041	Yes
314	CIB1	17780	18361	-5.707	-0.1974	Yes
315	IKBKAP	2540 6045	18387	-5.885	-0.1889	Yes
316	NOLC1	7704	18389	-5.942	-0.1789	Yes
317	NOLA3	14914	18401	-6.008	-0.1695	Yes
318	NOL5A	12474	18420	-6.093	-0.1602	Yes
319	EXOSC1	12379	18434	-6.213	-0.1505	Yes
320	RUVBL2	9766	18447	-6.380	-0.1404	Yes
321	MYBBP1A	5217 1232 5216	18476	-6.687	-0.1307	Yes
322	DDX21	19751	18501	-6.981	-0.1203	Yes
323	MRPL12	12090	18520	-7.154	-0.1093	Yes
324	SDAD1	16479	18526	-7.222	-0.0974	Yes
325	LYAR	16856	18565	-8.120	-0.0858	Yes
326	GNL3	21894 3356	18570	-8.174	-0.0723	Yes
327	MKI67IP	7509	18572	-8.216	-0.0586	Yes
328	CIRH1A	18478	18578	-8.378	-0.0448	Yes
329	RRP9	19328	18599	-9.150	-0.0305	Yes
330	POLR1E	7226	18600	-9.216	-0.0150	Yes
331	NOLA2	11972	18603	-9.426	0.0007	Yes