Details for gene set V$NMYC

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB_repos
Phenotype	phenotype_transDMproB_versus_DMpreB.cls#transDMproB_versus_DMpreB_repos
Upregulated in class	DMpreB
GeneSet	V$NMYC_01
Enrichment Score (ES)	-0.47986695
Normalized Enrichment Score (NES)	-1.2810876
Nominal p-value	0.024074074
FDR q-value	0.544086
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PFKFB3	2748	505	4.484	-0.0047	No
2	PSEN2	13736	557	4.276	0.0141	No
3	STAT3	5525 9906	569	4.247	0.0349	No
4	KRTCAP2	15541	614	4.026	0.0529	No
5	DLX1	14988	648	3.891	0.0707	No
6	CDC14A	15184	682	3.756	0.0879	No
7	ELOVL6	5009	868	3.267	0.0944	No
8	FHOD1	18772	1084	2.741	0.0966	No
9	WBP2	20146	1140	2.640	0.1069	No
10	ANXA6	20449	1345	2.236	0.1072	No
11	SLC38A5	24388	1387	2.170	0.1159	No
12	TOP1	5790 5789 10210	1548	1.918	0.1169	No
13	TEF	2287 22414 2192	1785	1.637	0.1124	No
14	RBM3	5366 2625	1796	1.633	0.1201	No
15	GNA13	20617	1827	1.605	0.1265	No
16	SLC20A1	14855	1856	1.563	0.1329	No
17	ARRDC3	4191	1871	1.545	0.1400	No
18	RBBP6	5365	1994	1.406	0.1404	No
19	AP1GBP1	20725	2098	1.313	0.1415	No
20	RPL22	15979	2273	1.139	0.1378	No
21	NR1D1	4650 20258 949	2332	1.090	0.1402	No
22	MAX	21034	2381	1.044	0.1428	No
23	RCL1	3728 3743 23894	2393	1.037	0.1475	No
24	ZCCHC7	16225	2506	0.962	0.1463	No
25	HMGN2	9095	2587	0.887	0.1464	No
26	ZZZ3	15389 8445 4253 8444 1761	2749	0.739	0.1414	No
27	USP2	19480 3052 3043	2862	0.641	0.1386	No
28	SFXN2	3707 8255 3678 13588	2867	0.639	0.1416	No
29	GPD1	22361	2868	0.638	0.1448	No
30	SCYL1	23986	3046	0.530	0.1379	No
31	BMP2K	3657 16786	3139	0.478	0.1353	No
32	GJA1	20023	3216	0.444	0.1334	No
33	TLE3	5767 19416	3677	0.263	0.1098	No
34	ETV1	4688 8925 8924	3755	0.241	0.1068	No
35	TPM2	2367 2437	3799	0.229	0.1057	No
36	PDK2	20285	3835	0.222	0.1049	No
37	DUSP4	18632 3820	4129	0.160	0.0898	No
38	FKBP5	23051	4174	0.151	0.0882	No
39	U2AF2	5813 5812 5814	4319	0.132	0.0810	No
40	CLCN2	22637	4334	0.130	0.0809	No
41	PRDX4	24026	4392	0.120	0.0785	No
42	LIN28	15723	4666	0.090	0.0641	No
43	SEMA3F	18999 3097	4716	0.085	0.0619	No
44	KCNK5	4946 9212	4844	0.076	0.0554	No
45	CTBP2	17591 1137	4939	0.071	0.0506	No
46	NXPH1	17524	4986	0.069	0.0485	No
47	SC5DL	6165	5146	0.061	0.0402	No
48	ABCA1	15881	5294	0.054	0.0325	No
49	HOXC13	22344	5558	0.044	0.0184	No
50	CEBPB	8733	5620	0.042	0.0153	No
51	NUP153	21474	5681	0.041	0.0123	No
52	SNCAIP	12589	5815	0.037	0.0053	No
53	SOCS5	1619 23141	6137	0.030	-0.0120	No
54	COL2A1	22145 4542	6347	0.025	-0.0232	No
55	CACNA1D	4464 8675	6388	0.025	-0.0252	No
56	HPCA	9118	6482	0.023	-0.0302	No
57	AKAP10	20411 7145	7190	0.011	-0.0685	No
58	NKX2-2	5176	7599	0.005	-0.0906	No
59	RUNX2	4480 8700	7650	0.004	-0.0932	No
60	HHIP	4849	8030	-0.000	-0.1138	No
61	APOA5	19469	8039	-0.000	-0.1142	No
62	SEPT3	6275 10775	8303	-0.004	-0.1285	No
63	ADPRHL1	18930 3863	8471	-0.006	-0.1375	No
64	CUGBP1	2805 8819 4576 2924	8484	-0.007	-0.1381	No
65	SCFD2	5607	8524	-0.007	-0.1402	No
66	ADAM10	4336	8534	-0.007	-0.1406	No
67	NDUFS1	13940	8627	-0.008	-0.1456	No
68	MTHFD1	2132 21238	8706	-0.010	-0.1498	No
69	GRIN2A	22668	8800	-0.011	-0.1548	No
70	B3GALT2	6498	8894	-0.012	-0.1598	No
71	SEMA7A	19426 9803	9104	-0.015	-0.1710	No
72	SLC17A2	10163 5744	9109	-0.015	-0.1711	No
73	BCL2	8651 3928 13864 4435 981 4062 13863 4027	9115	-0.015	-0.1713	No
74	LHX9	9276	9156	-0.016	-0.1734	No
75	TIAL1	996 5753	9296	-0.018	-0.1809	No
76	B4GALT2	11990	9332	-0.018	-0.1827	No
77	NEUROD2	20262	9401	-0.019	-0.1863	No
78	BARHL1	14634	9414	-0.020	-0.1868	No
79	HS3ST3A1	20844	9803	-0.025	-0.2077	No
80	GPC3	24151	9984	-0.028	-0.2174	No
81	PRKCE	9575	10004	-0.029	-0.2182	No
82	AMPD2	1931 15197	10189	-0.032	-0.2281	No
83	CTSF	23772	10249	-0.033	-0.2311	No
84	NRXN1	1581 1575 22875	10252	-0.033	-0.2310	No
85	GTPBP1	4814 2255	10273	-0.033	-0.2320	No
86	LAP3	12442	10339	-0.034	-0.2353	No
87	ANGPT2	14885 3783 18923	10430	-0.036	-0.2400	No
88	FGF11	20383	10697	-0.040	-0.2542	No
89	EIF3S1	905 8114	10712	-0.041	-0.2548	No
90	STMN4	21977	10833	-0.043	-0.2611	No
91	NPM1	1196	10941	-0.045	-0.2667	No
92	DNMT3A	2167 21330	11106	-0.048	-0.2753	No
93	KIAA0427	11228	11122	-0.049	-0.2759	No
94	SLC12A5	14731	11255	-0.052	-0.2828	No
95	EN2	16898	11277	-0.052	-0.2836	No
96	PCDHA10	8792	11293	-0.053	-0.2842	No
97	CHRM1	23943	11350	-0.054	-0.2870	No
98	PLAG1	7148 15949 12161	11529	-0.058	-0.2963	No
99	PLA2G4A	13809	11626	-0.061	-0.3012	No
100	POGK	7739	11666	-0.062	-0.3030	No
101	FKBP10	20667	11705	-0.063	-0.3048	No
102	DNAJB9	6565	11805	-0.066	-0.3098	No
103	POU3F1	16093	12120	-0.076	-0.3264	No
104	BAI2	2541 2379 16067	12224	-0.080	-0.3316	No
105	ALX4	4379	12311	-0.085	-0.3359	No
106	FLT3	16288	12437	-0.091	-0.3422	No
107	RAD9A	913 3674 910 23958	12944	-0.116	-0.3690	No
108	NEUROD6	17138	13011	-0.120	-0.3720	No
109	MNT	20784	13174	-0.130	-0.3801	No
110	PLAGL1	10372 3414	13478	-0.154	-0.3958	No
111	GPS1	1392 9943 5550 9944	13481	-0.154	-0.3951	No
112	TESK2	10504	13544	-0.160	-0.3977	No
113	ENPP6	6816 11583	13710	-0.176	-0.4057	No
114	WEE1	18127	13796	-0.184	-0.4094	No
115	XRN2	2936 6302 2905	13854	-0.190	-0.4115	No
116	SGTB	21571	13993	-0.205	-0.4180	No
117	HRH3	14317	14014	-0.208	-0.4180	No
118	LMNB1	23549 1943	14078	-0.216	-0.4204	No
119	MCM8	14834	14090	-0.218	-0.4199	No
120	RTN4RL2	14544	14178	-0.230	-0.4234	No
121	RNF128	24236 2641	14248	-0.241	-0.4259	No
122	ADAMTS17	598	14288	-0.245	-0.4268	No
123	CHST11	19921	14334	-0.252	-0.4280	No
124	ADCY3	21329 894	14643	-0.316	-0.4431	No
125	PANK3	20924	14662	-0.320	-0.4425	No
126	DLC1	11931 3855	14744	-0.344	-0.4451	No
127	SOX12	5478	14791	-0.353	-0.4458	No
128	MYST3	18651	14930	-0.394	-0.4513	No
129	HOXB7	666 9110	15082	-0.446	-0.4572	No
130	ARF6	21252	15107	-0.456	-0.4562	No
131	PABPC1	5219 9522 9523 23572	15334	-0.551	-0.4657	No
132	BCL7C	4442	15367	-0.570	-0.4646	No
133	VARS2	23265 1595 7588	15387	-0.581	-0.4627	No
134	SRP72	16819	15705	-0.787	-0.4759	Yes
135	GRK6	6449	15759	-0.829	-0.4746	Yes
136	TIMM9	19686	15817	-0.873	-0.4733	Yes
137	JPH1	13994	15826	-0.877	-0.4693	Yes
138	GADD45G	21637	15858	-0.901	-0.4664	Yes
139	RPL13A	10226 79	15871	-0.912	-0.4624	Yes
140	IPO13	15784	15881	-0.920	-0.4583	Yes
141	PES1	7236	15887	-0.923	-0.4539	Yes
142	HRSP12	9123 9122 4870 9638	15952	-0.981	-0.4524	Yes
143	HMOX1	18565	16022	-1.007	-0.4511	Yes
144	RXRB	23285 9768	16058	-1.026	-0.4478	Yes
145	MXD4	9346	16082	-1.040	-0.4438	Yes
146	VPS16	2927 14845 2825	16105	-1.061	-0.4396	Yes
147	EIF4B	13279 7979	16431	-1.360	-0.4504	Yes
148	NRAS	5191	16449	-1.395	-0.4442	Yes
149	SH3KBP1	2631 12206 7189	16606	-1.557	-0.4448	Yes
150	HBP1	2048 2162 21086	16634	-1.578	-0.4383	Yes
151	PABPC4	10510 2418 2548	16673	-1.609	-0.4323	Yes
152	GADD45B	19935	16692	-1.625	-0.4250	Yes
153	NR5A1	14597	16721	-1.656	-0.4182	Yes
154	RAMP2	20660	16733	-1.668	-0.4104	Yes
155	RPIA	17124	16768	-1.705	-0.4036	Yes
156	UBE1	24370 2551	17042	-2.087	-0.4079	Yes
157	PPARGC1B	9318	17086	-2.155	-0.3993	Yes
158	MAPKAPK3	19003	17096	-2.168	-0.3889	Yes
159	PFN1	9555	17197	-2.289	-0.3827	Yes
160	ZHX2	11842	17273	-2.466	-0.3743	Yes
161	EIF4G1	22818	17339	-2.599	-0.3647	Yes
162	HTF9C	4886 1678	17479	-2.864	-0.3578	Yes
163	HSPD1	4078 9129	17647	-3.193	-0.3507	Yes
164	G6PC3	1221 20645	17699	-3.328	-0.3367	Yes
165	ATP6V0B	15786	17714	-3.351	-0.3205	Yes
166	LIG3	4998	17860	-3.733	-0.3096	Yes
167	TIMM10	11390 2158	17944	-4.026	-0.2937	Yes
168	HYAL2	4891	18073	-4.499	-0.2779	Yes
169	COPS7A	11221 16997	18169	-4.852	-0.2586	Yes
170	PA2G4	5265	18195	-4.947	-0.2350	Yes
171	POLR3E	18100	18281	-5.230	-0.2132	Yes
172	ATP5G1	8636	18339	-5.580	-0.1881	Yes
173	NOL5A	12474	18420	-6.093	-0.1616	Yes
174	ATAD3A	8440	18432	-6.199	-0.1309	Yes
175	IPO4	7983	18462	-6.540	-0.0995	Yes
176	HSPE1	9133	18500	-6.948	-0.0664	Yes
177	FBL	8955	18521	-7.161	-0.0313	Yes
178	PPAT	6081	18522	-7.211	0.0051	Yes