Details for gene set V$AP4

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB_repos
Phenotype	phenotype_transDMproB_versus_DMpreB.cls#transDMproB_versus_DMpreB_repos
Upregulated in class	transDMproB
GeneSet	V$AP4_Q6
Enrichment Score (ES)	0.59193766
Normalized Enrichment Score (NES)	1.5773306
Nominal p-value	0.0
FDR q-value	0.051295195
FWER p-Value	0.421

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LAT	17643	116	7.434	0.0523	Yes
2	MYLK	22778 4213	202	6.449	0.0985	Yes
3	SYTL1	15728	253	6.057	0.1436	Yes
4	BSCL2	23940	319	5.473	0.1832	Yes
5	BACH1	8647	330	5.432	0.2254	Yes
6	RAB27A	19381	367	5.170	0.2642	Yes
7	HSD11B1	9125 4019	446	4.702	0.2971	Yes
8	MESDC1	17771	457	4.654	0.3332	Yes
9	TNNT2	14113	535	4.364	0.3634	Yes
10	RAB3A	9681	615	4.024	0.3909	Yes
11	PTPN7	11500	659	3.836	0.4188	Yes
12	RUNX1	4481	743	3.588	0.4426	Yes
13	LCK	15746	786	3.491	0.4678	Yes
14	NDST2	21906	948	3.052	0.4831	Yes
15	PICALM	18191	1089	2.731	0.4971	Yes
16	ESRRA	23802	1372	2.195	0.4991	Yes
17	CTDSP1	4121 10407	1441	2.079	0.5118	Yes
18	ADRBK1	23960	1453	2.060	0.5275	Yes
19	VAMP3	15660	1482	2.019	0.5419	Yes
20	TRAF4	10217 5796 1400	1563	1.906	0.5525	Yes
21	PGF	21020	1750	1.666	0.5556	Yes
22	ARID1A	8214 2501 13554	1797	1.633	0.5660	Yes
23	TMOD4	1816 1884 15509	1950	1.461	0.5693	Yes
24	ABHD4	22021	2094	1.315	0.5719	Yes
25	CNNM2	8251	2222	1.194	0.5744	Yes
26	EYA3	8936 2352	2294	1.122	0.5794	Yes
27	CACNB2	4466 8678	2406	1.023	0.5815	Yes
28	PCYT1B	24289	2556	0.919	0.5807	Yes
29	HMGN2	9095	2587	0.887	0.5860	Yes
30	TRAPPC3	6553 16080 2469 11305	2605	0.868	0.5919	Yes
31	VAT1	11253	3527	0.311	0.5445	No
32	ZNF385	22106 2297	3558	0.298	0.5453	No
33	HOXB5	20687	3804	0.229	0.5338	No
34	XPNPEP1	9310 3677 23645	3870	0.214	0.5320	No
35	EYA1	4695 4061	3919	0.200	0.5310	No
36	DHRS3	15997	3946	0.193	0.5311	No
37	ELF4	24162	4199	0.148	0.5186	No
38	RPS6KB1	7815 1207 13040	4207	0.147	0.5194	No
39	EPOR	19204	4365	0.123	0.5118	No
40	GAS7	20836 1299	4366	0.123	0.5128	No
41	JMJD1C	11531 19996	4393	0.120	0.5123	No
42	ABLIM1	3717 3766 3679	4408	0.118	0.5125	No
43	PTK7	22959	4569	0.098	0.5046	No
44	PROK2	17057	4611	0.095	0.5032	No
45	FMO5	4730 15489	4678	0.088	0.5003	No
46	SYTL2	18190 1539 3730	4681	0.088	0.5009	No
47	COL7A1	8769 4547	4769	0.081	0.4968	No
48	RBMS3	18973	4882	0.074	0.4913	No
49	SUV39H2	7232 12263	5108	0.063	0.4796	No
50	RXRG	14063	5115	0.062	0.4798	No
51	CREB3L1	14521	5207	0.058	0.4753	No
52	AKAP2	8565	5279	0.055	0.4719	No
53	RGS7	13743	5390	0.050	0.4664	No
54	ARHGEF2	4987	5563	0.044	0.4574	No
55	UBTF	1313 10052	5731	0.040	0.4487	No
56	TRPC4	15593	5944	0.034	0.4375	No
57	PITX3	9571	6005	0.033	0.4345	No
58	ASB5	13322	6109	0.030	0.4291	No
59	SOST	20210	6128	0.030	0.4284	No
60	EPHA2	16006	6188	0.029	0.4254	No
61	INHA	14214	6215	0.028	0.4243	No
62	PDE3A	7045	6514	0.022	0.4083	No
63	MID2	24232	6757	0.018	0.3953	No
64	CPEB3	5539	6897	0.015	0.3879	No
65	HAPLN2	15296	7044	0.013	0.3801	No
66	WNT4	16025	7200	0.011	0.3718	No
67	NXPH3	20281	7501	0.007	0.3556	No
68	KCNMA1	4947	7527	0.006	0.3543	No
69	GNG3	23752	7624	0.005	0.3492	No
70	FOXD3	9088	7667	0.004	0.3469	No
71	PLXNB3	24304	7830	0.002	0.3382	No
72	ASB16	20644	8093	-0.001	0.3240	No
73	PCDH12	7005	8253	-0.003	0.3154	No
74	KCNE1L	24044	8427	-0.006	0.3061	No
75	KCNQ4	12247 2533	8829	-0.011	0.2845	No
76	FBXO40	22599 444	8835	-0.011	0.2843	No
77	DLL3	17912	9828	-0.026	0.2308	No
78	FGF8	23656	9837	-0.026	0.2306	No
79	FGF12	1723 22621	9994	-0.028	0.2224	No
80	PRKCQ	2873 2831	10099	-0.030	0.2170	No
81	MLLT7	24278	10147	-0.031	0.2147	No
82	GNB3	9027	10337	-0.034	0.2047	No
83	SPOCK2	13585	10425	-0.036	0.2003	No
84	NES	5162 9454	10544	-0.038	0.1942	No
85	AICDA	17295 1087	10920	-0.045	0.1743	No
86	LOXL4	23672	10932	-0.045	0.1740	No
87	GRIN2B	16957	10968	-0.046	0.1725	No
88	KIRREL2	17889 3922	10993	-0.046	0.1715	No
89	FBXO24	12918 3649	11082	-0.048	0.1672	No
90	PALM2	10817 2368	11410	-0.055	0.1499	No
91	HOXC12	22343	11534	-0.058	0.1437	No
92	FOSL2	4733 8978 16878	11587	-0.060	0.1414	No
93	WNT2B	15214 1838	11702	-0.063	0.1357	No
94	RTKN	17394 1156	11713	-0.063	0.1356	No
95	CHRNG	4323	11733	-0.063	0.1351	No
96	GATA3	9004	11758	-0.064	0.1343	No
97	PABPC5	24077	11815	-0.066	0.1318	No
98	CADPS	11298	11853	-0.067	0.1303	No
99	MAP3K13	22814	11925	-0.070	0.1270	No
100	PRKACA	18549 3844	11953	-0.071	0.1261	No
101	HOXA6	17150	12126	-0.077	0.1174	No
102	FHL3	16092 2457	12242	-0.081	0.1118	No
103	PTCH2	9640	12604	-0.098	0.0931	No
104	PTPRS	1507 1565 1602 22928	12679	-0.101	0.0898	No
105	ERN1	8137	12954	-0.116	0.0759	No
106	EMILIN3	11376	12958	-0.116	0.0767	No
107	CACNA1G	1237 940 20292	13123	-0.126	0.0688	No
108	TNRC4	15514	13180	-0.131	0.0668	No
109	NEUROG3	20005	13240	-0.135	0.0647	No
110	MYBPH	14130	13272	-0.137	0.0641	No
111	FRAS1	16788 3589	13297	-0.139	0.0639	No
112	BCL2L2	8653 4441	13423	-0.148	0.0583	No
113	ARNT	4413 1857	13512	-0.157	0.0547	No
114	ANXA8	22046	13726	-0.178	0.0446	No
115	TCF7	1467 20466	13747	-0.180	0.0450	No
116	AMPH	3256 21700	13765	-0.182	0.0455	No
117	GRIK3	16083	13875	-0.193	0.0411	No
118	DOCK4	10705	13920	-0.197	0.0403	No
119	NPPA	298	13969	-0.202	0.0393	No
120	KCNN2	8933 1949	14000	-0.207	0.0393	No
121	TNFSF4	14082	14012	-0.208	0.0403	No
122	WNT9A	5709	14103	-0.219	0.0372	No
123	LBX1	98 23659	14171	-0.229	0.0353	No
124	HFE2	1777 15495	14310	-0.248	0.0298	No
125	WDTC1	10512	14331	-0.252	0.0307	No
126	SCAMP5	3028 19100	14657	-0.319	0.0156	No
127	ZRANB1	6884 11702	14730	-0.341	0.0144	No
128	SOX12	5478	14791	-0.353	0.0140	No
129	BCL11B	7190	14886	-0.380	0.0119	No
130	RASGRF2	21397	14897	-0.382	0.0143	No
131	OBSCN	20434	15156	-0.477	0.0041	No
132	HOXC4	4864	15695	-0.780	-0.0188	No
133	INPPL1	17733 3775	16218	-1.154	-0.0380	No
134	PRICKLE1	8379	16229	-1.167	-0.0294	No
135	STOML2	15902	16273	-1.202	-0.0222	No
136	STARD13	10833	16487	-1.441	-0.0224	No
137	KLF13	17807	16572	-1.530	-0.0149	No
138	TPM3	12233 7209 7208 1790	16615	-1.565	-0.0048	No
139	RAMP2	20660	16733	-1.668	0.0020	No
140	NANOS1	6858	17302	-2.524	-0.0089	No
141	TMOD3	6945	17592	-3.060	-0.0004	No
142	ARHGAP24	16778 3655	17641	-3.164	0.0220	No
143	EMP3	17824 968	17907	-3.904	0.0384	No