Details for gene set REACTOME_HIV

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB_repos
Phenotype	phenotype_transDMproB_versus_DMpreB.cls#transDMproB_versus_DMpreB_repos
Upregulated in class	DMpreB
GeneSet	REACTOME_HIV_INFECTION
Enrichment Score (ES)	-0.65191853
Normalized Enrichment Score (NES)	-1.6751153
Nominal p-value	0.0
FDR q-value	0.018967876
FWER p-Value	0.199

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PSMB9	23021	323	5.459	0.0063	No
2	PSMB2	2324 16078	711	3.670	0.0014	No
3	XRCC6	2286 8991	742	3.590	0.0154	No
4	LCK	15746	786	3.491	0.0283	No
5	LIG4	11454	935	3.083	0.0338	No
6	TAF12	2537 16058 2338	979	2.991	0.0445	No
7	ELL	18586	1041	2.850	0.0536	No
8	PACS1	23975	1062	2.803	0.0647	No
9	TCEB2	12563 23102 7476	2076	1.333	0.0158	No
10	AP2A2	18009	2196	1.223	0.0147	No
11	TCEB3	15707	2243	1.172	0.0173	No
12	CCNT1	22140 11607	2349	1.081	0.0163	No
13	RAN	5356 9691	2444	1.000	0.0156	No
14	RANBP1	9692 5357	2445	1.000	0.0200	No
15	NUP54	11231 11232 6516	2571	0.901	0.0171	No
16	PSMA3	9632 5298	2673	0.808	0.0152	No
17	AP1B1	8599	2838	0.661	0.0092	No
18	PSME1	5300 9637	3070	0.516	-0.0010	No
19	PSMD10	2578 2597 24046	3127	0.485	-0.0019	No
20	PSMB10	5299 18761	3162	0.463	-0.0018	No
21	ARF1	64	3224	0.439	-0.0032	No
22	LIG1	18388 1749 1493	3446	0.342	-0.0136	No
23	RANGAP1	2180 22195	3447	0.342	-0.0121	No
24	RNGTT	10769 2354 6272	3737	0.247	-0.0267	No
25	CD28	14239 4092	4275	0.138	-0.0551	No
26	PPIA	1284 11188	4376	0.122	-0.0600	No
27	HCK	14787	4391	0.120	-0.0602	No
28	GTF2A1	2064 8187 8188 13512	4575	0.098	-0.0697	No
29	NUP153	21474	5681	0.041	-0.1292	No
30	POLR2C	9750	5936	0.034	-0.1428	No
31	PSMA6	21270	6335	0.025	-0.1642	No
32	TPR	927 4255	6877	0.016	-0.1934	No
33	PSMA1	1627 17669	7334	0.009	-0.2180	No
34	ERCC2	1549 18363 3812	7384	0.008	-0.2206	No
35	AP2B1	12958 7752 12957 1280	7401	0.008	-0.2215	No
36	XRCC4	4238 8432	7532	0.006	-0.2285	No
37	B2M	72 14882	8147	-0.002	-0.2617	No
38	NUP35	12803	8155	-0.002	-0.2620	No
39	TAF4	14319	8626	-0.008	-0.2874	No
40	FYN	3375 3395 20052	9588	-0.022	-0.3393	No
41	POLR2B	16817	10054	-0.030	-0.3643	No
42	PSMD5	2774 14612	10407	-0.035	-0.3832	No
43	CDK7	21365	11650	-0.061	-0.4500	No
44	CD4	16999	12030	-0.073	-0.4702	No
45	XRCC5	14229	12055	-0.074	-0.4712	No
46	GTF2A2	10654	12265	-0.082	-0.4821	No
47	TAF9	3213 8433	12406	-0.089	-0.4893	No
48	XPO1	4172	12880	-0.112	-0.5144	No
49	PSMD11	12772 7600	13078	-0.123	-0.5245	No
50	TAF13	8288	13683	-0.173	-0.5564	No
51	GTF2H1	4069 18236	13978	-0.204	-0.5714	No
52	NUP188	15053	14132	-0.223	-0.5787	No
53	PSMC3	9636	14271	-0.243	-0.5851	No
54	PSMA2	9631	14554	-0.293	-0.5991	No
55	GTF2B	10489	14646	-0.316	-0.6026	No
56	AP1G1	4392	15035	-0.425	-0.6218	No
57	MNAT1	9396 2161	15363	-0.569	-0.6370	No
58	PSMB6	9634	15579	-0.698	-0.6455	No
59	PSMB4	15252	15677	-0.765	-0.6474	No
60	PSMD4	15251	15753	-0.824	-0.6479	Yes
61	POLR2A	5394	15814	-0.870	-0.6474	Yes
62	FEN1	8961	15855	-0.898	-0.6456	Yes
63	GTF2F1	13599	15922	-0.958	-0.6450	Yes
64	NUP62	9497	16051	-1.023	-0.6475	Yes
65	TAF5	23833 5934 3759	16122	-1.071	-0.6466	Yes
66	POLR2I	12839	16178	-1.117	-0.6447	Yes
67	PSMA5	6464	16241	-1.174	-0.6429	Yes
68	PSMC6	7379	16310	-1.237	-0.6412	Yes
69	RANBP2	20019	16336	-1.259	-0.6371	Yes
70	PAK2	10310 5875	16358	-1.281	-0.6326	Yes
71	CDK9	14619	16469	-1.426	-0.6323	Yes
72	PSMD3	5803	16523	-1.485	-0.6287	Yes
73	RNMT	7501	16547	-1.511	-0.6234	Yes
74	NUP155	2298 5027	16563	-1.521	-0.6176	Yes
75	PSMD8	7166	16675	-1.611	-0.6166	Yes
76	TBP	671 1554	16689	-1.625	-0.6102	Yes
77	RBX1	12130 7123	16729	-1.662	-0.6050	Yes
78	KPNA1	22776	16790	-1.735	-0.6007	Yes
79	PSMA4	11179	16871	-1.842	-0.5970	Yes
80	SUPT4H1	9938	16949	-1.956	-0.5927	Yes
81	PSMC4	2141 17915	16976	-1.996	-0.5854	Yes
82	TAF10	10785	16990	-2.022	-0.5773	Yes
83	TAF6	16322 891	17014	-2.052	-0.5696	Yes
84	PSMC1	9635	17026	-2.067	-0.5611	Yes
85	PSMB1	23118	17038	-2.079	-0.5527	Yes
86	NUP37	3294 3326 19909	17158	-2.232	-0.5494	Yes
87	POLR2E	3325 19699	17221	-2.334	-0.5426	Yes
88	TAF11	12733	17261	-2.429	-0.5341	Yes
89	RDBP	6589	17325	-2.577	-0.5263	Yes
90	ERCC3	23605	17337	-2.596	-0.5155	Yes
91	CCNH	7322	17431	-2.762	-0.5085	Yes
92	BANF1	6216 10706 3760	17446	-2.797	-0.4971	Yes
93	TCEB1	13995	17465	-2.829	-0.4857	Yes
94	PSMB3	11180	17536	-2.970	-0.4766	Yes
95	GTF2E1	22597	17583	-3.047	-0.4658	Yes
96	PSMD12	20621	17621	-3.111	-0.4542	Yes
97	PSMD9	3461 7393	17635	-3.147	-0.4412	Yes
98	PSMC2	16909	17677	-3.270	-0.4292	Yes
99	PSMB5	9633	17739	-3.411	-0.4176	Yes
100	NCBP2	12643	17747	-3.425	-0.4031	Yes
101	GTF2E2	18635	17760	-3.460	-0.3886	Yes
102	POLR2G	23753	17842	-3.679	-0.3770	Yes
103	NUP160	14957	17870	-3.756	-0.3621	Yes
104	PSMA7	14318	17880	-3.794	-0.3460	Yes
105	POLR2J	16672	17905	-3.892	-0.3303	Yes
106	TH1L	14715	17931	-3.986	-0.3143	Yes
107	PSMC5	1348 20624	17937	-3.998	-0.2972	Yes
108	PSMD14	15005	17987	-4.160	-0.2817	Yes
109	NUP107	8337	18011	-4.236	-0.2645	Yes
110	POLR2H	10888	18043	-4.355	-0.2472	Yes
111	NUP93	7762	18055	-4.422	-0.2285	Yes
112	GTF2H3	5551	18092	-4.576	-0.2105	Yes
113	PSME3	20657	18155	-4.800	-0.1929	Yes
114	RAE1	12395	18206	-4.967	-0.1740	Yes
115	PSMD2	10137 5724	18238	-5.062	-0.1536	Yes
116	KPNB1	20274	18273	-5.185	-0.1328	Yes
117	GTF2H2	6236	18289	-5.254	-0.1107	Yes
118	NUPL2	6072	18324	-5.505	-0.0886	Yes
119	GTF2F2	21750	18491	-6.869	-0.0676	Yes
120	NUP43	20094	18528	-7.233	-0.0380	Yes
121	PSMD7	18752 3825	18607	-9.809	0.0005	Yes