Details for gene set V$HNF3ALPHA

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	V$HNF3ALPHA_Q6
Enrichment Score (ES)	-0.6696099
Normalized Enrichment Score (NES)	-1.7191421
Nominal p-value	0.0
FDR q-value	0.022538383
FWER p-Value	0.028

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TAF5L	18712	490	4.481	0.0086	No
2	XPO4	7161	800	3.430	0.0187	No
3	ACACA	309 4209	884	3.192	0.0392	No
4	TPP2	14257	1509	2.041	0.0215	No
5	FGF13	4720 8963 2627	1833	1.619	0.0167	No
6	STOML2	15902	2264	1.073	0.0018	No
7	GOLGA1	14595	2439	0.947	-0.0002	No
8	MEF2C	3204 9378	2707	0.739	-0.0089	No
9	FOXP2	4312 17523 8523	3234	0.394	-0.0342	No
10	TWIST1	21291	3357	0.347	-0.0381	No
11	CHCHD7	16280	3470	0.308	-0.0418	No
12	SLC39A8	12547 1776	3697	0.249	-0.0520	No
13	PALMD	15181	3713	0.246	-0.0509	No
14	BCL11B	7190	3740	0.240	-0.0505	No
15	TRIB1	22467	3893	0.212	-0.0570	No
16	HOXC4	4864	3935	0.203	-0.0577	No
17	H2AFY	21447	3944	0.202	-0.0565	No
18	TBX4	5633	4061	0.182	-0.0614	No
19	ATOH8	17120	4330	0.148	-0.0747	No
20	CP	4555	4403	0.141	-0.0775	No
21	HOXB3	20685	4551	0.127	-0.0845	No
22	COL13A1	8763	4555	0.127	-0.0836	No
23	CYR61	9159 15145 9311 5024	4769	0.111	-0.0943	No
24	ELAVL4	15805 4889 9137	5370	0.077	-0.1262	No
25	GATA6	96	5451	0.075	-0.1299	No
26	NKD1	8228	5466	0.074	-0.1301	No
27	REPS2	24018	5571	0.069	-0.1352	No
28	NEBL	14678 2691	5641	0.067	-0.1384	No
29	KCTD15	17864	5681	0.065	-0.1400	No
30	GCNT2	9168 3166 3243 21661 3270	5901	0.059	-0.1514	No
31	POGZ	6031 1911	5931	0.058	-0.1525	No
32	SYN3	19658	6128	0.053	-0.1627	No
33	IRX5	18527	6197	0.051	-0.1660	No
34	SMPX	24220	6324	0.048	-0.1724	No
35	CRH	8784	6337	0.047	-0.1727	No
36	RBP3	22047	6484	0.045	-0.1802	No
37	ATOH1	4419	6591	0.042	-0.1856	No
38	PIK3C2A	17667	6785	0.038	-0.1958	No
39	OTP	21582	6826	0.038	-0.1977	No
40	PPP1CB	5282 3529 3504	6889	0.037	-0.2007	No
41	PTPRG	22097 3151	6988	0.035	-0.2058	No
42	HSF2	9128	6999	0.035	-0.2060	No
43	PITX2	15424 1878	7188	0.031	-0.2160	No
44	SOX15	9848	7332	0.029	-0.2235	No
45	TNR	5787	7721	0.023	-0.2443	No
46	WNT4	16025	7868	0.021	-0.2520	No
47	GDF8	9411	8129	0.018	-0.2659	No
48	BOK	11953 14174	8179	0.017	-0.2685	No
49	WNT5A	22066 5880	8233	0.016	-0.2712	No
50	TBXAS1	17480 1105	8272	0.016	-0.2731	No
51	MYL1	4015	8369	0.015	-0.2782	No
52	KLF12	4960 2637 21732 9228	8710	0.010	-0.2965	No
53	C8B	16163	8716	0.010	-0.2967	No
54	NEUROD2	20262	8856	0.008	-0.3042	No
55	TYRO3	5811	8858	0.008	-0.3042	No
56	CALD1	4273 8463	8892	0.008	-0.3059	No
57	LRRTM3	19744	9112	0.005	-0.3177	No
58	FOXA2	14405 2889	9330	0.002	-0.3295	No
59	GNAO1	4785 3829	9360	0.002	-0.3310	No
60	ALDH9A1	14064	9402	0.001	-0.3332	No
61	MAP3K13	22814	9607	-0.002	-0.3442	No
62	ODZ1	24168	9659	-0.002	-0.3470	No
63	TCF7L2	10048 5646	9716	-0.003	-0.3500	No
64	EBF2	21975	9755	-0.003	-0.3520	No
65	NRAS	5191	10314	-0.010	-0.3821	No
66	CYP7A1	15945	10507	-0.013	-0.3924	No
67	PURA	9670	10677	-0.015	-0.4015	No
68	ITGA3	20284	10930	-0.019	-0.4150	No
69	ANGPTL1	10195 8589 13064	11172	-0.022	-0.4278	No
70	NR4A3	9473 16212 5183	11250	-0.023	-0.4318	No
71	CHRDL1	8180 13504	11369	-0.025	-0.4380	No
72	RGMA	18213	11681	-0.031	-0.4546	No
73	TJP1	17803	11711	-0.031	-0.4559	No
74	PRDM1	19775 3337	11762	-0.032	-0.4584	No
75	NFIA	16172 5170	11870	-0.034	-0.4639	No
76	FOXB1	12254 19069	11903	-0.034	-0.4654	No
77	OTX2	9519	11917	-0.035	-0.4658	No
78	BAMBI	23629	11965	-0.035	-0.4681	No
79	SPDEF	23055	12506	-0.048	-0.4969	No
80	PHEX	24024	12530	-0.049	-0.4978	No
81	HOXA11	17146	12543	-0.049	-0.4980	No
82	HOXB8	9111	12628	-0.051	-0.5022	No
83	PLAG1	7148 15949 12161	12683	-0.053	-0.5047	No
84	PACSIN3	14948 8149 2776 2665	12704	-0.053	-0.5054	No
85	ARHGEF2	4987	12824	-0.056	-0.5114	No
86	TWIST2	14185	13001	-0.061	-0.5204	No
87	LRP5	23948 9285	13028	-0.062	-0.5213	No
88	VTN	20756	13186	-0.068	-0.5293	No
89	PLA2G1B	9581	13374	-0.075	-0.5388	No
90	FOXN1	20337	13491	-0.080	-0.5445	No
91	FABP4	8601	13924	-0.107	-0.5670	No
92	LCP2	4988 9268	14104	-0.118	-0.5758	No
93	TLE1	5765 10185 15859	14168	-0.124	-0.5782	No
94	NEO1	5161	14197	-0.127	-0.5788	No
95	MGLL	17368 1145	14199	-0.127	-0.5778	No
96	CLDN2	4527	14223	-0.129	-0.5781	No
97	C1QA	8666	14321	-0.137	-0.5822	No
98	FARP1	5849 10279	14443	-0.151	-0.5876	No
99	TLE3	5767 19416	14526	-0.159	-0.5908	No
100	GTF2A1	2064 8187 8188 13512	14800	-0.198	-0.6040	No
101	GBX2	13887	14822	-0.202	-0.6036	No
102	PUM2	2071 8161	14851	-0.206	-0.6035	No
103	DMD	24295 2647	14880	-0.212	-0.6033	No
104	GNAZ	71	14892	-0.214	-0.6022	No
105	HAPLN1	21592	14944	-0.225	-0.6032	No
106	SSH3	3709 10890	15005	-0.238	-0.6046	No
107	FGF9	8966	15041	-0.246	-0.6046	No
108	GPM6A	3834 10618	15085	-0.255	-0.6049	No
109	ITPKB	3963 14028	15245	-0.293	-0.6112	No
110	BAIAP2	449 4236	15318	-0.314	-0.6127	No
111	BRUNOL4	2010 4229	15546	-0.403	-0.6218	No
112	PDE4D	10722 6235	15809	-0.523	-0.6319	No
113	TGFB3	10161	15964	-0.628	-0.6353	No
114	EGR2	8886	16019	-0.677	-0.6329	No
115	MCC	552	16064	-0.708	-0.6298	No
116	PDCD4	5232 23816	16447	-1.066	-0.6421	No
117	ZADH2	23501	16598	-1.223	-0.6406	No
118	BUB3	18045	16662	-1.322	-0.6337	No
119	LUC7L	47 1520	17327	-2.350	-0.6512	Yes
120	CHD2	10847	17373	-2.423	-0.6347	Yes
121	PRKAG1	22135	17374	-2.424	-0.6157	Yes
122	TOB1	20703	17438	-2.536	-0.5992	Yes
123	AKT3	13739 982	17441	-2.539	-0.5794	Yes
124	UHRF2	3731 4262 8452 23887	17523	-2.683	-0.5628	Yes
125	LMO6	24392	17538	-2.705	-0.5423	Yes
126	PRDX5	7053 3732	17594	-2.836	-0.5231	Yes
127	GABARAPL1	17268	17640	-2.923	-0.5026	Yes
128	FOXP1	4242	17922	-3.738	-0.4886	Yes
129	H2AFV	1273 20531	17949	-3.802	-0.4602	Yes
130	KLF3	4961	17951	-3.804	-0.4304	Yes
131	ZHX2	11842	18038	-4.076	-0.4032	Yes
132	NDST2	21906	18058	-4.144	-0.3717	Yes
133	IL18	9172	18242	-5.084	-0.3418	Yes
134	ABI1	4300	18324	-5.473	-0.3033	Yes
135	CDKN1A	4511 8729	18334	-5.522	-0.2605	Yes
136	UTX	10266 2574	18342	-5.585	-0.2172	Yes
137	PAFAH1B3	17928	18371	-5.755	-0.1736	Yes
138	CDC42EP3	6436	18482	-6.904	-0.1254	Yes
139	SGK	9809 3419	18514	-7.351	-0.0695	Yes
140	DUSP6	19891 3399	18611	-9.573	0.0003	Yes