Details for gene set V$HFH3

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	V$HFH3_01
Enrichment Score (ES)	-0.6295045
Normalized Enrichment Score (NES)	-1.5932925
Nominal p-value	0.0
FDR q-value	0.060152844
FWER p-Value	0.307

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP2A2	4421 3481	846	3.299	-0.0124	No
2	GRB7	20673	1581	1.934	-0.0325	No
3	BAT2	23006	1972	1.436	-0.0390	No
4	HESX1	22070	2036	1.352	-0.0287	No
5	PHTF2	16599	2063	1.321	-0.0168	No
6	STOML2	15902	2264	1.073	-0.0167	No
7	GOLGA1	14595	2439	0.947	-0.0165	No
8	AHI1	20077	2488	0.906	-0.0100	No
9	MEF2C	3204 9378	2707	0.739	-0.0143	No
10	BRIP1	20311	2922	0.572	-0.0201	No
11	FOXP2	4312 17523 8523	3234	0.394	-0.0329	No
12	RAD21	22298	3266	0.383	-0.0307	No
13	EPN1	18401	3336	0.359	-0.0308	No
14	TWIST1	21291	3357	0.347	-0.0283	No
15	CHCHD7	16280	3470	0.308	-0.0313	No
16	SLC39A8	12547 1776	3697	0.249	-0.0410	No
17	PALMD	15181	3713	0.246	-0.0393	No
18	BCL11B	7190	3740	0.240	-0.0383	No
19	HOXC4	4864	3935	0.203	-0.0467	No
20	TBX4	5633	4061	0.182	-0.0516	No
21	SLC35C2	10463 14339	4238	0.160	-0.0595	No
22	SCG3	19061	4326	0.149	-0.0627	No
23	MYST4	7027 7026 12014 2739	4364	0.145	-0.0633	No
24	MID1	5097 5098	4512	0.131	-0.0699	No
25	HOXB3	20685	4551	0.127	-0.0707	No
26	COL13A1	8763	4555	0.127	-0.0695	No
27	ORC4L	11172 6460	4571	0.126	-0.0691	No
28	CYR61	9159 15145 9311 5024	4769	0.111	-0.0786	No
29	GPRC5C	12864	5208	0.085	-0.1014	No
30	GRM3	16929	5231	0.084	-0.1018	No
31	ELAVL4	15805 4889 9137	5370	0.077	-0.1084	No
32	NKD1	8228	5466	0.074	-0.1128	No
33	RBP2	19347	5521	0.071	-0.1150	No
34	PVRL1	3006 19482 12211 7192	5564	0.069	-0.1166	No
35	REPS2	24018	5571	0.069	-0.1162	No
36	SYT6	13437 7042 12040	5616	0.067	-0.1179	No
37	UBE2H	5823 5822	5656	0.066	-0.1194	No
38	KCTD15	17864	5681	0.065	-0.1200	No
39	OMD	21643	5730	0.064	-0.1220	No
40	FBXW11	20926	5922	0.058	-0.1317	No
41	TNFSF15	15863	5968	0.057	-0.1336	No
42	CYP26B1	17093	6292	0.048	-0.1505	No
43	CRH	8784	6337	0.047	-0.1524	No
44	RBP3	22047	6484	0.045	-0.1599	No
45	LGI1	23867	6519	0.044	-0.1613	No
46	HOXA10	17145 989	6757	0.039	-0.1737	No
47	PIK3C2A	17667	6785	0.038	-0.1748	No
48	NCAM1	5149	6809	0.038	-0.1756	No
49	PPP1CB	5282 3529 3504	6889	0.037	-0.1795	No
50	NR3C2	18562 13798	6899	0.037	-0.1797	No
51	ARTN	15783 2430 2532	7056	0.034	-0.1877	No
52	SOX15	9848	7332	0.029	-0.2023	No
53	GPR142	20604	7736	0.023	-0.2239	No
54	GABRE	24140	7825	0.022	-0.2284	No
55	HTR1B	19051	8221	0.017	-0.2496	No
56	WNT5A	22066 5880	8233	0.016	-0.2501	No
57	MYL1	4015	8369	0.015	-0.2572	No
58	RUNX2	4480 8700	8624	0.011	-0.2708	No
59	KLF12	4960 2637 21732 9228	8710	0.010	-0.2753	No
60	NEUROD2	20262	8856	0.008	-0.2831	No
61	TYRO3	5811	8858	0.008	-0.2831	No
62	CLDN8	22549 1747	9068	0.006	-0.2943	No
63	PRX	3729 9628	9131	0.005	-0.2976	No
64	GNAO1	4785 3829	9360	0.002	-0.3099	No
65	BAI3	5580	9437	0.001	-0.3140	No
66	LHX3	2761 4996	9466	0.000	-0.3155	No
67	SLIT3	20925	9626	-0.002	-0.3241	No
68	TCF7L2	10048 5646	9716	-0.003	-0.3289	No
69	ACCN1	20327 1194	9718	-0.003	-0.3289	No
70	LTA	23003	9883	-0.005	-0.3378	No
71	UBXD3	15701	10016	-0.007	-0.3448	No
72	ATP1B4	12586	10310	-0.010	-0.3606	No
73	NIN	9463 2103	10679	-0.015	-0.3803	No
74	IRS4	9183 4926	10847	-0.018	-0.3892	No
75	ITGA3	20284	10930	-0.019	-0.3934	No
76	NR4A3	9473 16212 5183	11250	-0.023	-0.4104	No
77	RGMA	18213	11681	-0.031	-0.4334	No
78	TJP1	17803	11711	-0.031	-0.4346	No
79	PRDM1	19775 3337	11762	-0.032	-0.4370	No
80	NFIA	16172 5170	11870	-0.034	-0.4425	No
81	ADAM23	10699 4057	11893	-0.034	-0.4433	No
82	OTX2	9519	11917	-0.035	-0.4442	No
83	GRIK2	3318	11926	-0.035	-0.4443	No
84	REST	16818	11942	-0.035	-0.4447	No
85	C1QTNF3	2224 22505	11999	-0.036	-0.4474	No
86	HOXA11	17146	12543	-0.049	-0.4763	No
87	HOXB8	9111	12628	-0.051	-0.4803	No
88	TNF	23004	12665	-0.052	-0.4817	No
89	PLAG1	7148 15949 12161	12683	-0.053	-0.4821	No
90	FOXD3	9088	12815	-0.055	-0.4886	No
91	TWIST2	14185	13001	-0.061	-0.4980	No
92	CEBPA	4514	13139	-0.066	-0.5048	No
93	BMP5	19376	13482	-0.079	-0.5225	No
94	SLITRK6	21724	13944	-0.108	-0.5463	No
95	DOCK3	9920 5537 10751	14150	-0.122	-0.5562	No
96	TLE3	5767 19416	14526	-0.159	-0.5748	No
97	SHOX2	1802 5432	14711	-0.185	-0.5829	No
98	DMD	24295 2647	14880	-0.212	-0.5898	No
99	FUT8	2163 21233	14919	-0.220	-0.5897	No
100	SSH3	3709 10890	15005	-0.238	-0.5918	No
101	CRIM1	403	15091	-0.256	-0.5939	No
102	RPS6KB1	7815 1207 13040	15117	-0.261	-0.5926	No
103	ETV1	4688 8925 8924	15380	-0.333	-0.6034	No
104	BRUNOL4	2010 4229	15546	-0.403	-0.6082	No
105	MAP2K5	19088	15555	-0.405	-0.6045	No
106	UBR1	5828	15572	-0.412	-0.6012	No
107	CPNE1	11186	15613	-0.426	-0.5991	No
108	EGR2	8886	16019	-0.677	-0.6141	Yes
109	MCC	552	16064	-0.708	-0.6093	Yes
110	NEDD4	19384 3101	16246	-0.907	-0.6099	Yes
111	ICK	7135 12146	16282	-0.949	-0.6022	Yes
112	BUB3	18045	16662	-1.322	-0.6093	Yes
113	CAB39L	21992	17036	-1.838	-0.6109	Yes
114	RAB3IP	19623	17220	-2.176	-0.5988	Yes
115	CSNK1E	6570 2211 11332	17264	-2.241	-0.5784	Yes
116	PRKAG1	22135	17374	-2.424	-0.5597	Yes
117	PAIP2	12593	17398	-2.482	-0.5358	Yes
118	TOB1	20703	17438	-2.536	-0.5123	Yes
119	ZHX2	11842	18038	-4.076	-0.5034	Yes
120	ETV5	22630	18044	-4.102	-0.4621	Yes
121	MSI2	8030 1268	18136	-4.503	-0.4214	Yes
122	KLF7	8205	18211	-4.915	-0.3757	Yes
123	AP1GBP1	20725	18350	-5.626	-0.3262	Yes
124	FLI1	4729	18402	-6.008	-0.2681	Yes
125	DUSP1	23061	18438	-6.362	-0.2056	Yes
126	CDC42EP3	6436	18482	-6.904	-0.1380	Yes
127	GFRA1	9015	18490	-6.979	-0.0677	Yes
128	SGK	9809 3419	18514	-7.351	0.0055	Yes