Details for gene set V$FREAC7

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	V$FREAC7_01
Enrichment Score (ES)	-0.61695147
Normalized Enrichment Score (NES)	-1.5650164
Nominal p-value	0.0
FDR q-value	0.07489662
FWER p-Value	0.449

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TIMM8B	11391	890	3.180	-0.0094	No
2	SDHD	19125	1545	1.990	-0.0206	No
3	HESX1	22070	2036	1.352	-0.0306	No
4	DRG1	1199 20553	2105	1.261	-0.0190	No
5	STOML2	15902	2264	1.073	-0.0144	No
6	GOLGA1	14595	2439	0.947	-0.0123	No
7	NFRKB	10642	2480	0.910	-0.0034	No
8	EPN1	18401	3336	0.359	-0.0453	No
9	TGFB2	5743	3353	0.350	-0.0419	No
10	TWIST1	21291	3357	0.347	-0.0378	No
11	CHCHD7	16280	3470	0.308	-0.0401	No
12	DTNA	8870 4647 23611 1991	3730	0.242	-0.0512	No
13	BCL11B	7190	3740	0.240	-0.0488	No
14	HOXC4	4864	3935	0.203	-0.0568	No
15	CACNA2D3	8677	3953	0.201	-0.0553	No
16	CH25H	23695	4340	0.147	-0.0743	No
17	MID1	5097 5098	4512	0.131	-0.0820	No
18	COL13A1	8763	4555	0.127	-0.0827	No
19	VCP	11254	4780	0.110	-0.0935	No
20	NTF3	16991	4805	0.109	-0.0935	No
21	SOX2	9849 15612	4978	0.098	-0.1016	No
22	NRG1	3885	5099	0.090	-0.1070	No
23	GRM3	16929	5231	0.084	-0.1130	No
24	IBSP	16775	5269	0.082	-0.1140	No
25	BNC2	15850	5408	0.076	-0.1205	No
26	FST	8985	5497	0.072	-0.1244	No
27	SYT6	13437 7042 12040	5616	0.067	-0.1300	No
28	UBE2H	5823 5822	5656	0.066	-0.1313	No
29	KCTD15	17864	5681	0.065	-0.1318	No
30	PAX3	13910	5683	0.065	-0.1311	No
31	POGZ	6031 1911	5931	0.058	-0.1437	No
32	TNFSF15	15863	5968	0.057	-0.1450	No
33	DNAJA4	19446	6072	0.054	-0.1499	No
34	OGG1	17331	6130	0.053	-0.1523	No
35	CRH	8784	6337	0.047	-0.1629	No
36	CSF3	1394 20671	6539	0.043	-0.1732	No
37	RNF17	11389	6557	0.043	-0.1736	No
38	HOXA10	17145 989	6757	0.039	-0.1839	No
39	PIK3C2A	17667	6785	0.038	-0.1849	No
40	PPP1CB	5282 3529 3504	6889	0.037	-0.1900	No
41	EN1	387 14155	6942	0.036	-0.1924	No
42	NEUROD6	17138	7093	0.033	-0.2001	No
43	EN2	16898	7357	0.028	-0.2140	No
44	GDF8	9411	8129	0.018	-0.2554	No
45	GPR110	23234	8163	0.017	-0.2570	No
46	PCDH11X	2559	8348	0.015	-0.2668	No
47	GATA4	21792 4755	8608	0.011	-0.2807	No
48	RUNX2	4480 8700	8624	0.011	-0.2813	No
49	KIAA1715	7629	8738	0.010	-0.2873	No
50	NEUROD2	20262	8856	0.008	-0.2936	No
51	TYRO3	5811	8858	0.008	-0.2935	No
52	CLDN8	22549 1747	9068	0.006	-0.3047	No
53	NFIB	15855	9395	0.001	-0.3224	No
54	BAI3	5580	9437	0.001	-0.3246	No
55	DEPDC2	14295	9655	-0.002	-0.3363	No
56	CTGF	20068	9676	-0.002	-0.3373	No
57	TCF7L2	10048 5646	9716	-0.003	-0.3394	No
58	ACCN1	20327 1194	9718	-0.003	-0.3394	No
59	SNCAIP	12589	9831	-0.005	-0.3454	No
60	ABCA1	15881	9838	-0.005	-0.3457	No
61	TSHB	15218	10280	-0.010	-0.3694	No
62	ATP1B4	12586	10310	-0.010	-0.3708	No
63	NRAS	5191	10314	-0.010	-0.3709	No
64	NPPB	15994	10485	-0.013	-0.3799	No
65	NIN	9463 2103	10679	-0.015	-0.3902	No
66	CXCL2	9790	10702	-0.016	-0.3912	No
67	HAND2	18615	10785	-0.017	-0.3954	No
68	CXXC5	12523	10860	-0.018	-0.3992	No
69	PTF1A	15110	11670	-0.030	-0.4426	No
70	RGMA	18213	11681	-0.031	-0.4427	No
71	BAMBI	23629	11965	-0.035	-0.4576	No
72	FEZ1	19520 3100	12153	-0.039	-0.4672	No
73	FLRT3	7730 12930 2673	12180	-0.039	-0.4682	No
74	GPR109B	16374	12213	-0.040	-0.4694	No
75	IL17C	18438	12261	-0.042	-0.4714	No
76	HOXA11	17146	12543	-0.049	-0.4860	No
77	PLEC1	2273 2198 2205 2178 2230 22247 2213 2231 2295 2172 5263 2266	12586	-0.050	-0.4877	No
78	PLAG1	7148 15949 12161	12683	-0.053	-0.4923	No
79	PACSIN3	14948 8149 2776 2665	12704	-0.053	-0.4927	No
80	FOXD3	9088	12815	-0.055	-0.4980	No
81	PCDHB6	8224	13191	-0.068	-0.5174	No
82	BEX2	24055	13349	-0.074	-0.5250	No
83	TYR	17763	13354	-0.074	-0.5243	No
84	NDST4	12259 7228	14040	-0.114	-0.5600	No
85	LCP2	4988 9268	14104	-0.118	-0.5619	No
86	MGLL	17368 1145	14199	-0.127	-0.5655	No
87	SEMA6D	2800 14876 90	14269	-0.133	-0.5676	No
88	ELK3	4663 94 3388	14736	-0.189	-0.5905	No
89	GTF2A1	2064 8187 8188 13512	14800	-0.198	-0.5915	No
90	FLOT1	23249 1613	14922	-0.221	-0.5954	No
91	POU2F1	5275 3989 4065 4010	14949	-0.225	-0.5940	No
92	SSH3	3709 10890	15005	-0.238	-0.5941	No
93	FGF9	8966	15041	-0.246	-0.5930	No
94	CLDN23	18893	15315	-0.313	-0.6040	No
95	EFNA5	4655 8884	15319	-0.314	-0.6003	No
96	HIVEP3	4973	15528	-0.393	-0.6068	Yes
97	NFYA	5172	15535	-0.397	-0.6022	Yes
98	BRUNOL4	2010 4229	15546	-0.403	-0.5979	Yes
99	UBR1	5828	15572	-0.412	-0.5942	Yes
100	CGA	16246	15826	-0.528	-0.6015	Yes
101	MAGED2	24034	15912	-0.585	-0.5989	Yes
102	NEDD4	19384 3101	16246	-0.907	-0.6059	Yes
103	SSBP3	2439 7814 2431	16349	-0.999	-0.5993	Yes
104	ELMO1	3275 8939 3202 3271 3254 3235 3164 3175 3274 3188 3293 3214 3218 3239	16358	-1.001	-0.5875	Yes
105	TAZ	12415	16490	-1.117	-0.5810	Yes
106	ZADH2	23501	16598	-1.223	-0.5719	Yes
107	BUB3	18045	16662	-1.322	-0.5592	Yes
108	GALNT1	8998 23609 8999 4750	16937	-1.721	-0.5531	Yes
109	RHOBTB1	12789	16963	-1.732	-0.5334	Yes
110	MCART1	10492	17083	-1.929	-0.5164	Yes
111	CSNK1E	6570 2211 11332	17264	-2.241	-0.4988	Yes
112	PRKAG1	22135	17374	-2.424	-0.4752	Yes
113	TRIM8	23824	17390	-2.463	-0.4460	Yes
114	RAB5B	359 19591 3430	17395	-2.480	-0.4161	Yes
115	JUNB	9201	17543	-2.722	-0.3909	Yes
116	HOXB4	20686	17960	-3.831	-0.3668	Yes
117	IER3	23248	17998	-3.945	-0.3208	Yes
118	ZHX2	11842	18038	-4.076	-0.2733	Yes
119	ETV5	22630	18044	-4.102	-0.2237	Yes
120	RHOB	4411	18087	-4.288	-0.1738	Yes
121	PIAS1	7126	18126	-4.458	-0.1216	Yes
122	CSNK1G3	12873	18274	-5.253	-0.0656	Yes
123	CDC42EP3	6436	18482	-6.904	0.0072	Yes