Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	transDMpreB
GeneSet	V$E2F_02
Enrichment Score (ES)	0.5576575
Normalized Enrichment Score (NES)	1.4219594
Nominal p-value	0.0076923077
FDR q-value	0.31749833
FWER p-Value	0.994

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EIF4A1	8889 23719	38	8.864	0.0364	Yes
2	SNRPD1	23622	192	6.236	0.0552	Yes
3	CDCA7	12437	210	6.035	0.0804	Yes
4	UNG	10257 16744	232	5.883	0.1048	Yes
5	FANCD2	17326 464	240	5.822	0.1297	Yes
6	FKBP5	23051	329	5.237	0.1476	Yes
7	GSPT1	9046	357	5.076	0.1682	Yes
8	MCM3	13991	372	4.986	0.1891	Yes
9	RQCD1	12205	397	4.875	0.2089	Yes
10	CDC25A	8721	411	4.833	0.2292	Yes
11	MCM2	17074	445	4.703	0.2478	Yes
12	MSH2	23138	583	4.074	0.2580	Yes
13	ACBD6	14089	621	3.968	0.2733	Yes
14	PHF5A	22194	627	3.958	0.2902	Yes
15	DNMT1	19217	641	3.927	0.3065	Yes
16	HMGA1	23323	710	3.664	0.3187	Yes
17	NOLC1	7704	728	3.609	0.3334	Yes
18	POLD3	17742	746	3.578	0.3480	Yes
19	GMNN	21513	749	3.568	0.3634	Yes
20	PRPS1	24233	811	3.405	0.3749	Yes
21	MAP3K7	16255	878	3.198	0.3852	Yes
22	HIRA	4852 9090	979	2.952	0.3926	Yes
23	ACO2	8527	984	2.941	0.4051	Yes
24	MRPL40	22641	993	2.919	0.4173	Yes
25	NUP62	9497	1020	2.854	0.4283	Yes
26	SMAD6	19083	1090	2.735	0.4364	Yes
27	PCNA	9535	1127	2.676	0.4461	Yes
28	NCL	5153 13899	1212	2.514	0.4524	Yes
29	NASP	2383 2387 6955	1225	2.494	0.4626	Yes
30	ILF3	3110 3030 9176	1240	2.476	0.4726	Yes
31	EED	17759	1249	2.461	0.4828	Yes
32	AP1S1	3500 3453 16335	1306	2.379	0.4901	Yes
33	SUMO1	5826 3943 10247	1350	2.328	0.4979	Yes
34	SUV39H1	24194	1410	2.217	0.5043	Yes
35	RRM2	5401 5400	1481	2.084	0.5096	Yes
36	PRPS2	24003	1523	2.022	0.5161	Yes
37	MCM7	9372 3568	1539	1.995	0.5240	Yes
38	BRPF1	17332	1574	1.942	0.5305	Yes
39	SFRS1	8492	1857	1.596	0.5222	Yes
40	CLSPN	16079 11256 6530	1890	1.549	0.5272	Yes
41	SYNCRIP	3078 3035 3107	1899	1.539	0.5334	Yes
42	STMN1	9261	1957	1.452	0.5366	Yes
43	E2F1	14384	1966	1.442	0.5425	Yes
44	E2F7	19884	2086	1.299	0.5416	Yes
45	ZCCHC8	3570 7696	2131	1.233	0.5446	Yes
46	PHC1	17013	2136	1.230	0.5497	Yes
47	USP37	13923	2155	1.208	0.5540	Yes
48	BRMS1L	21268	2183	1.179	0.5577	Yes
49	E2F3	21500 8874	2288	1.048	0.5566	No
50	HTF9C	4886 1678	2513	0.889	0.5483	No
51	FHOD1	18772	2527	0.882	0.5514	No
52	FANCC	4712	2538	0.873	0.5547	No
53	POLR2A	5394	2663	0.775	0.5513	No
54	TRIM39	22994	2667	0.772	0.5545	No
55	SFRS7	22889	2779	0.674	0.5514	No
56	NR6A1	14596	2796	0.662	0.5534	No
57	PTMA	9657	2914	0.576	0.5496	No
58	CDC5L	7746 7745 7744	2952	0.557	0.5500	No
59	USP52	3397 19841	3056	0.489	0.5465	No
60	PRKDC	9617 22847	3126	0.448	0.5447	No
61	ASXL2	7957	3193	0.413	0.5430	No
62	MAPT	9420 1347	3311	0.367	0.5382	No
63	GATA1	24196	3313	0.366	0.5397	No
64	MAZ	1327 17623	3902	0.209	0.5088	No
65	SEMA6A	23439 9802	3948	0.201	0.5072	No
66	CDC6	6221 6220	4074	0.180	0.5013	No
67	PAQR4	23105	4278	0.155	0.4909	No
68	FBXO5	19830	4774	0.111	0.4646	No
69	KCNA6	664 16990 665 4938	5006	0.096	0.4525	No
70	PHF15	20467 8050	5278	0.082	0.4382	No
71	FANCG	15904	5732	0.063	0.4139	No
72	RANBP1	9692 5357	5788	0.062	0.4112	No
73	YBX2	20818	5844	0.060	0.4085	No
74	ARID4A	2080 6215	5853	0.060	0.4083	No
75	GLRA3	18617	5865	0.060	0.4080	No
76	HNRPUL1	6118 17923 1608 10577 1345	5894	0.059	0.4067	No
77	ATAD2	2268 2256	6038	0.055	0.3992	No
78	POU4F1	21727	6059	0.054	0.3984	No
79	IPO7	6130	6750	0.039	0.3612	No
80	STAG1	5520 9905 2987	7002	0.035	0.3477	No
81	KCNS2	4949 2232	7006	0.035	0.3477	No
82	GRIA4	19249	7078	0.033	0.3440	No
83	SLCO3A1	17796 4237 8430	7122	0.033	0.3418	No
84	MYH10	8077	7677	0.024	0.3119	No
85	STK35	14851	7678	0.024	0.3120	No
86	POLE2	21053	7814	0.022	0.3048	No
87	NELL2	12006 7020 22151	7996	0.020	0.2951	No
88	ZBTB4	13267	8019	0.019	0.2940	No
89	SFRS10	9818 1722 5441	8049	0.019	0.2925	No
90	PCSK1	21600	8125	0.018	0.2885	No
91	HNRPA2B1	1187 7001 7000 1040	8228	0.016	0.2831	No
92	GABRB3	4747	8278	0.016	0.2805	No
93	HOXC10	22342	8430	0.014	0.2723	No
94	PODN	15811	8681	0.010	0.2589	No
95	TYRO3	5811	8858	0.008	0.2494	No
96	ADAMTS2	5706 20899 1356	8974	0.007	0.2432	No
97	HNRPD	8645	9217	0.004	0.2301	No
98	DNAJC9	21912	9225	0.004	0.2297	No
99	FMO4	13786	9538	-0.001	0.2128	No
100	NRK	6559	9714	-0.003	0.2033	No
101	PAX6	5223	10181	-0.009	0.1781	No
102	PRPF4B	3208 5295	10398	-0.012	0.1665	No
103	RPS6KA5	2076 21005	10489	-0.013	0.1617	No
104	TOPBP1	10659	10535	-0.013	0.1593	No
105	EPHB1	19024	10967	-0.019	0.1360	No
106	SP3	5483	11020	-0.020	0.1333	No
107	RET	17028	11047	-0.021	0.1320	No
108	CBX3	8705 4484	11399	-0.026	0.1131	No
109	CASP8AP2	16253	11427	-0.026	0.1117	No
110	HCN3	4843 1763	11507	-0.027	0.1076	No
111	PLAGL1	10372 3414	11764	-0.032	0.0938	No
112	EZH2	1092 17163	12641	-0.051	0.0466	No
113	TBX6	1993 18075	12826	-0.056	0.0369	No
114	ARHGAP6	24207	12930	-0.059	0.0316	No
115	HS6ST3	21933	13040	-0.063	0.0259	No
116	PEG3	5240	13230	-0.069	0.0160	No
117	SYNGR4	17825	13769	-0.095	-0.0127	No
118	HNRPR	13196 7909 2500	13785	-0.096	-0.0131	No
119	GPRC5B	17662	14187	-0.126	-0.0343	No
120	RBL1	14373	14231	-0.130	-0.0361	No
121	TLE3	5767 19416	14526	-0.159	-0.0513	No
122	MCM8	14834	14591	-0.168	-0.0540	No
123	DMD	24295 2647	14880	-0.212	-0.0687	No
124	MYC	22465 9435	14983	-0.233	-0.0732	No
125	MAPK6	19062	15221	-0.286	-0.0848	No
126	EFNA5	4655 8884	15319	-0.314	-0.0887	No
127	CCNT1	22140 11607	15392	-0.339	-0.0911	No
128	MSH5	23010 1599	15631	-0.435	-0.1021	No
129	AP4M1	3499 16656	15643	-0.438	-0.1008	No
130	RPS20	7438	15692	-0.460	-0.1014	No
131	ATF5	17843	15697	-0.462	-0.0997	No
132	MCM6	4000 13845 4119	15750	-0.489	-0.1003	No
133	CORT	15669 2539	15920	-0.593	-0.1069	No
134	H2AFZ	6957	16123	-0.772	-0.1145	No
135	TMPO	5778	16191	-0.856	-0.1144	No
136	UGCGL1	6721	16210	-0.870	-0.1116	No
137	STAG2	5521	16249	-0.911	-0.1097	No
138	MCM4	22655 1708	16371	-1.005	-0.1119	No
139	HIST1H2AH	11414	16813	-1.529	-0.1292	No
140	ING3	17514 1019	16839	-1.576	-0.1237	No
141	AK2	8563 2479 16073	16931	-1.712	-0.1212	No
142	POLD1	17847	17042	-1.851	-0.1191	No
143	SLC9A7	24177	17097	-1.949	-0.1136	No
144	ALDH6A1	21025	17108	-1.975	-0.1056	No
145	PIM1	23308	17289	-2.292	-0.1054	No
146	POLE4	12441	17502	-2.639	-0.1054	No
147	HIST1H2BK	11423	17527	-2.689	-0.0950	No
148	HIST1H4A	11590	17734	-3.148	-0.0925	No
149	H2AFV	1273 20531	17949	-3.802	-0.0876	No
150	SOAT1	13797	18022	-4.030	-0.0741	No
151	DCK	16808	18181	-4.761	-0.0620	No
152	PPM1D	20721	18221	-4.979	-0.0425	No
153	MXD3	21455	18327	-5.489	-0.0244	No
154	IL4I1	8971	18601	-9.209	0.0008	No