DatasetSet_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls
#transDMpreB_versus_WTpreB
Phenotypephenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in classtransDMpreB
GeneSetV$E2F1_Q6_01
Enrichment Score (ES)0.58776784
Normalized Enrichment Score (NES)1.4905951
Nominal p-value0.0019230769
FDR q-value0.80493575
FWER p-Value0.845
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$E2F1_Q6_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CDCA7124372106.0350.0187Yes
2UNG10257 167442325.8830.0468Yes
3PPRC1238082605.6660.0735Yes
4FKBP5230513295.2370.0959Yes
5GSPT190463575.0760.1197Yes
6MCM3139913724.9860.1438Yes
7POLA2239883964.8850.1669Yes
8RQCD1122053974.8750.1911Yes
9CDC25A87214114.8330.2145Yes
10MCM2170744454.7030.2361Yes
11MSH2231385834.0740.2490Yes
12ACBD6140896213.9680.2667Yes
13PHF5A221946273.9580.2861Yes
14DNMT1192176413.9270.3050Yes
15ATP5G2126106813.7810.3217Yes
16NOLC177047283.6090.3371Yes
17POLD3177427463.5780.3540Yes
18GMNN215137493.5680.3717Yes
19PRPS1242338113.4050.3853Yes
20HIRA4852 90909792.9520.3910Yes
21ACO285279842.9410.4054Yes
22MRPL40226419932.9190.4195Yes
23PCNA953511272.6760.4256Yes
24RPS19539811682.5940.4363Yes
25NCL5153 1389912122.5140.4465Yes
26NASP2383 2387 695512252.4940.4583Yes
27ILF33110 3030 917612402.4760.4699Yes
28EED1775912492.4610.4817Yes
29AP1S13500 3453 1633513062.3790.4905Yes
30SUMO15826 3943 1024713502.3280.4997Yes
31SUV39H12419414102.2170.5076Yes
32MCM79372 356815391.9950.5106Yes
33INSM11481515501.9790.5199Yes
34PPP1R81573015791.9370.5280Yes
35NUMA11816716831.7890.5313Yes
36SIN3A544217651.6830.5353Yes
37AMD1858318281.6230.5400Yes
38SFRS1849218571.5960.5465Yes
39CLSPN16079 11256 653018901.5490.5524Yes
40SYNCRIP3078 3035 310718991.5390.5597Yes
41STMN1926119571.4520.5638Yes
42E2F11438419661.4420.5705Yes
43DNAJC112486 606821351.2310.5676Yes
44USP371392321551.2080.5726Yes
45BRMS1L2126821831.1790.5770Yes
46SFRS29807 2013622241.1310.5804Yes
47SLC25A12264522431.1010.5849Yes
48E2F321500 887422881.0480.5878Yes
49HTF9C4886 167825130.8890.5801No
50FHOD11877225270.8820.5837No
51FANCC471225380.8730.5876No
52TRIM392299426670.7720.5845No
53PTMA965729140.5760.5740No
54CDC5L7746 7745 774429520.5570.5748No
55USP523397 1984130560.4890.5716No
56PRKDC9617 2284731260.4480.5701No
57ASXL2795731930.4130.5686No
58GATA12419633130.3660.5640No
59USP219480 3052 304334890.3030.5560No
60WEE11812735000.2970.5569No
61DDB22721 2878 14525 266138440.2190.5394No
62MAZ1327 1762339020.2090.5374No
63PAQR42310542780.1550.5178No
64TNFRSF19L11498 6727 672643060.1520.5171No
65NCOA62876 1438243720.1440.5143No
66HMGA24857 9098 3341 344444720.1350.5096No
67CNOT36112 10565 611344780.1340.5100No
68HR3622 911945970.1240.5043No
69FAF12508 16137 895147260.1140.4979No
70FBXO51983047740.1110.4959No
71RAD512897 1490350440.0940.4818No
72RPL18450 539052520.0830.4710No
73PHF1520467 805052780.0820.4700No
74REPS22401855710.0690.4546No
75SYT613437 7042 1204056160.0670.4525No
76FANCG1590457320.0630.4466No
77RANBP19692 535757880.0620.4439No
78YBX22081858440.0600.4413No
79HNRPUL16118 17923 1608 10577 134558940.0590.4389No
80ATAD22268 225660380.0550.4314No
81CDC45L22642 175265680.0430.4030No
82IPO7613067500.0390.3934No
83STAG15520 9905 298770020.0350.3799No
84KCNS24949 223270060.0350.3799No
85MYH10807776770.0240.3438No
86STK351485176780.0240.3439No
87POLE22105378140.0220.3367No
88PCSK12160081250.0180.3200No
89NPAT19452 635682660.0160.3125No
90HOXC102234284300.0140.3037No
91PODN1581186810.0100.2902No
92PCDH105227 9534 189386920.0100.2897No
93TYRO3581188580.0080.2808No
94ADAMTS25706 20899 135689740.0070.2746No
95ERBB2IP3232 1223490660.0060.2697No
96ATM2976 1911591620.0040.2646No
97HNRPD864592170.0040.2617No
98DNAJC92191292250.0040.2613No
99RB1CC14486 1429994270.0010.2504No
100FZD11692394290.0010.2504No
101BMP2148339957-0.0060.2219No
102IRX3187939965-0.0060.2215No
103PAX6522310181-0.0090.2099No
104MTSS15585 2228510467-0.0130.1945No
105DHH462910519-0.0130.1918No
106TOPBP11065910535-0.0130.1911No
107CASP2869211132-0.0220.1589No
108SPHK21217 1806 1215511209-0.0230.1549No
109CASP8AP21625311427-0.0260.1433No
110CBX522108 448511481-0.0270.1406No
111HCN34843 176311507-0.0270.1393No
112GNG42170611518-0.0270.1389No
113UXT5837 1026712294-0.0420.0972No
114EZH21092 1716312641-0.0510.0787No
115TNF2300412665-0.0520.0777No
116TBX61993 1807512826-0.0560.0693No
117MGAT22125612855-0.0560.0680No
118ARHGAP62420712930-0.0590.0643No
119SYNGR41782513769-0.0950.0194No
120HNRPR13196 7909 250013785-0.0960.0191No
121GPRC5B1766214187-0.126-0.0020No
122RBL11437314231-0.130-0.0037No
123MCM81483414591-0.168-0.0223No
124KLF5445614608-0.169-0.0223No
125ACTN323967 854014793-0.197-0.0313No
126ERF4680 891414929-0.222-0.0375No
127POU2F15275 3989 4065 401014949-0.225-0.0375No
128MYC22465 943514983-0.233-0.0381No
129SP1985215042-0.246-0.0400No
130SMARCA12416515241-0.291-0.0493No
131EFNA54655 888415319-0.314-0.0519No
132CCNT122140 1160715392-0.339-0.0541No
133LRP1928415456-0.363-0.0557No
134JPH11399415590-0.417-0.0608No
135AP4M13499 1665615643-0.438-0.0615No
136MCM64000 13845 411915750-0.489-0.0648No
137ORC1L327 1614415769-0.497-0.0633No
138ENPP11980415800-0.517-0.0623No
139PHF131565915802-0.519-0.0598No
140HMGN2909516119-0.766-0.0731No
141TMPO577816191-0.856-0.0727No
142STAG2552116249-0.911-0.0712No
143HNRPA19103 486016351-0.999-0.0717No
144MCM422655 170816371-1.005-0.0678No
145CHD48418 17281 422516459-1.079-0.0671No
146UFD1L2282516472-1.090-0.0623No
147PIK3CD956316667-1.326-0.0662No
148CTCF1849016806-1.517-0.0662No
149HIST1H2AH1141416813-1.529-0.0589No
150MAP4K11831316826-1.546-0.0518No
151GADD45B1993516872-1.620-0.0462No
152ATE1388 1760216885-1.644-0.0387No
153AK28563 2479 1607316931-1.712-0.0326No
154SLC9A72417717097-1.949-0.0318No
155HIST1H2BK1142317527-2.689-0.0417No
156RAB11B967617913-3.710-0.0441No
157PPM1D2072118221-4.979-0.0359No
158MXD32145518327-5.489-0.0143No
159FLI1472918402-6.0080.0116No
Table: GSEA details [plain text format]



Fig 2: V$E2F1_Q6_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$E2F1_Q6_01: Random ES distribution   
Gene set null distribution of ES for V$E2F1_Q6_01