Details for gene set REACTOME_DNA

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	transDMpreB
GeneSet	REACTOME_DNA_REPLICATION
Enrichment Score (ES)	0.7587812
Normalized Enrichment Score (NES)	1.7426238
Nominal p-value	0.0
FDR q-value	0.0025133935
FWER p-Value	0.017

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	POLD2	20537	78	7.693	0.0436	Yes
2	POLE	16755	111	7.095	0.0859	Yes
3	PSMD8	7166	184	6.298	0.1211	Yes
4	MCM3	13991	372	4.986	0.1420	Yes
5	POLA2	23988	396	4.885	0.1711	Yes
6	PSMA7	14318	403	4.860	0.2009	Yes
7	PSMB9	23021	417	4.798	0.2300	Yes
8	MCM2	17074	445	4.703	0.2578	Yes
9	MCM10	14694	448	4.697	0.2868	Yes
10	PSMD7	18752 3825	527	4.292	0.3093	Yes
11	PSMC5	1348 20624	544	4.232	0.3347	Yes
12	PSME3	20657	554	4.191	0.3602	Yes
13	RFC5	13005 7791	568	4.143	0.3853	Yes
14	PSMD3	5803	585	4.073	0.4097	Yes
15	RPA1	20349	648	3.903	0.4306	Yes
16	RFC4	1735 22627	670	3.827	0.4532	Yes
17	RFC1	16527	696	3.717	0.4749	Yes
18	PRIM1	19847	719	3.648	0.4964	Yes
19	POLD3	17742	746	3.578	0.5172	Yes
20	GMNN	21513	749	3.568	0.5393	Yes
21	PSMA4	11179	787	3.478	0.5589	Yes
22	PSMD12	20621	827	3.364	0.5776	Yes
23	MCM5	18564	842	3.327	0.5975	Yes
24	RPA2	2330 16057	895	3.168	0.6144	Yes
25	FEN1	8961	915	3.126	0.6328	Yes
26	RPA3	12667	932	3.065	0.6510	Yes
27	PSME1	5300 9637	1039	2.818	0.6627	Yes
28	PCNA	9535	1127	2.676	0.6747	Yes
29	E2F2	6327 10824 6839	1156	2.621	0.6894	Yes
30	PSMC4	2141 17915	1254	2.451	0.6994	Yes
31	CDK2	3438 3373 19592 3322	1447	2.143	0.7024	Yes
32	MCM7	9372 3568	1539	1.995	0.7098	Yes
33	PSMB5	9633	1584	1.927	0.7194	Yes
34	PSMC2	16909	1663	1.822	0.7265	Yes
35	PSMD14	15005	1687	1.787	0.7364	Yes
36	PSMB6	9634	1715	1.746	0.7458	Yes
37	ORC5L	11173 3595	1726	1.738	0.7560	Yes
38	RFC3	12786	2067	1.318	0.7459	Yes
39	PSMA5	6464	2069	1.318	0.7540	Yes
40	PSMD9	3461 7393	2249	1.096	0.7512	Yes
41	PSMD2	10137 5724	2266	1.069	0.7570	Yes
42	PSMC1	9635	2420	0.965	0.7547	Yes
43	PSMD10	2578 2597 24046	2453	0.936	0.7588	Yes
44	PSMC6	7379	2641	0.793	0.7536	No
45	PSMC3	9636	3137	0.443	0.7297	No
46	PSMB3	11180	3281	0.380	0.7243	No
47	PSMD4	15251	3885	0.213	0.6932	No
48	PSMB4	15252	4036	0.186	0.6862	No
49	PSMA2	9631	4081	0.179	0.6850	No
50	ORC4L	11172 6460	4571	0.126	0.6594	No
51	CDC45L	22642 1752	6568	0.043	0.5520	No
52	PSMD5	2774 14612	7473	0.027	0.5035	No
53	POLE2	21053	7814	0.022	0.4853	No
54	POLA1	24112	9653	-0.002	0.3862	No
55	PSMA1	1627 17669	10653	-0.015	0.3324	No
56	PSMA6	21270	11867	-0.033	0.2672	No
57	PSMA3	9632 5298	11971	-0.035	0.2619	No
58	ORC2L	385 13949	15082	-0.255	0.0958	No
59	PSMD11	12772 7600	15591	-0.417	0.0710	No
60	MCM6	4000 13845 4119	15750	-0.489	0.0655	No
61	ORC1L	327 16144	15769	-0.497	0.0676	No
62	LIG1	18388 1749 1493	16146	-0.805	0.0524	No
63	MCM4	22655 1708	16371	-1.005	0.0465	No
64	PSMB1	23118	16410	-1.038	0.0509	No
65	PSMB2	2324 16078	16807	-1.518	0.0390	No
66	CDC7	16765 3477	16934	-1.719	0.0429	No
67	POLD1	17847	17042	-1.851	0.0486	No
68	PSMB10	5299 18761	17450	-2.545	0.0425	No
69	RB1	21754	17773	-3.276	0.0454	No