Details for gene set NETPATH

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	NETPATH_TCR
Enrichment Score (ES)	-0.67539734
Normalized Enrichment Score (NES)	-1.6675596
Nominal p-value	0.0
FDR q-value	0.031158853
FWER p-Value	0.203

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PTK2	22271	8	10.070	0.0668	No
2	CEBPB	8733	449	4.666	0.0742	No
3	NCL	5153 13899	1212	2.514	0.0498	No
4	YWHAQ	10369	1436	2.169	0.0522	No
5	DEF6	23319	2251	1.091	0.0155	No
6	MAP2K1	19082	2547	0.862	0.0054	No
7	DOCK2	8243	2680	0.761	0.0033	No
8	DLG1	22793 1672	2949	0.559	-0.0074	No
9	CD3D	19473	3436	0.320	-0.0316	No
10	CD5	23741	3750	0.237	-0.0469	No
11	ARHGEF6	13297 13104	3918	0.207	-0.0545	No
12	RAPGEF1	4218 2860	3925	0.206	-0.0535	No
13	UNC119	20758	3934	0.203	-0.0525	No
14	VASP	5847	4079	0.179	-0.0591	No
15	TXK	16513	4155	0.170	-0.0620	No
16	AKT1	8568	4184	0.164	-0.0625	No
17	PIK3R2	18850	4208	0.163	-0.0626	No
18	FOS	21202	4219	0.162	-0.0621	No
19	DUSP3	1358 13022	4241	0.159	-0.0621	No
20	ABL1	2693 4301 2794	4314	0.151	-0.0650	No
21	SKAP2	17153	4375	0.143	-0.0673	No
22	SHC1	9813 9812 5430	4421	0.139	-0.0688	No
23	FYB	10717	4452	0.137	-0.0695	No
24	STAT5A	20664	4510	0.131	-0.0717	No
25	SHB	10493	4664	0.118	-0.0792	No
26	EVL	21156	4820	0.108	-0.0869	No
27	ITK	4934	4876	0.104	-0.0891	No
28	GRAP	20851	5104	0.090	-0.1008	No
29	STK39	14570	5144	0.089	-0.1023	No
30	RIPK2	2528 15935	5624	0.067	-0.1277	No
31	CD2AP	22975	5774	0.062	-0.1354	No
32	INSL3	9181	5980	0.057	-0.1461	No
33	NCK1	9447 5152	5996	0.056	-0.1465	No
34	ACP1	4317	6039	0.055	-0.1484	No
35	SRC	5507	6271	0.049	-0.1605	No
36	ZAP70	14271 4042	6321	0.048	-0.1629	No
37	CD4	16999	6410	0.046	-0.1673	No
38	ARHGEF7	3823	6776	0.039	-0.1868	No
39	GRAP2	5113 9398	7076	0.033	-0.2027	No
40	RAP1A	8467	7142	0.032	-0.2060	No
41	CD247	4498 8715	7180	0.032	-0.2078	No
42	CDC42	4503 8722 4504 2465	7363	0.028	-0.2174	No
43	PTPN12	16597 3502 3586 3665	7872	0.021	-0.2447	No
44	CD3G	19139	8313	0.015	-0.2684	No
45	PTPN3	9661	8441	0.014	-0.2752	No
46	CD3E	8714	8903	0.008	-0.3000	No
47	LAT	17643	9183	0.004	-0.3151	No
48	LYN	16281	9750	-0.003	-0.3456	No
49	PLCG1	14753	9775	-0.004	-0.3469	No
50	STAT5B	20222	10037	-0.007	-0.3609	No
51	NFATC2	5168 2866	10619	-0.014	-0.3922	No
52	SOS1	5476	10751	-0.016	-0.3992	No
53	PTPN22	1775 15470	11643	-0.030	-0.4471	No
54	PIK3R1	3170	11694	-0.031	-0.4496	No
55	CBL	19154	11843	-0.033	-0.4574	No
56	TUBB2A	21493	11913	-0.034	-0.4609	No
57	PTPN11	5326 16391 9660	12087	-0.038	-0.4700	No
58	CREB1	3990 8782 4558 4093	12096	-0.038	-0.4702	No
59	PAG1	15376	13138	-0.066	-0.5260	No
60	VAV3	1774 1848 15443	13236	-0.069	-0.5307	No
61	PTPRH	11861	13593	-0.085	-0.5494	No
62	CRK	4559 1249	13780	-0.096	-0.5588	No
63	LCP2	4988 9268	14104	-0.118	-0.5755	No
64	GAB2	1821 18184 2025	14159	-0.123	-0.5776	No
65	PRKCQ	2873 2831	14839	-0.204	-0.6129	No
66	JAK3	9198 4936	15055	-0.249	-0.6228	No
67	ENAH	4665 8901	15070	-0.252	-0.6219	No
68	FYN	3375 3395 20052	15076	-0.254	-0.6205	No
69	PTPRC	5327 9662	15502	-0.380	-0.6409	No
70	KHDRBS1	5405 9778	15739	-0.484	-0.6504	No
71	TUBA4A	10232	16060	-0.705	-0.6630	No
72	SH2D3C	2864	16139	-0.792	-0.6619	No
73	ARHGDIB	16950	16142	-0.803	-0.6567	No
74	CARD11	8436	16201	-0.863	-0.6540	No
75	PTPRJ	9664	16204	-0.867	-0.6484	No
76	RASA1	10174	16303	-0.967	-0.6472	No
77	MAP4K1	18313	16826	-1.546	-0.6651	Yes
78	SOS2	21049	16958	-1.731	-0.6606	Yes
79	PSTPIP1	19437	17089	-1.941	-0.6547	Yes
80	GRB2	20149	17099	-1.953	-0.6421	Yes
81	SLA	5449	17124	-1.995	-0.6301	Yes
82	CISH	8743	17180	-2.104	-0.6190	Yes
83	HOMER3	18590	17457	-2.554	-0.6169	Yes
84	DBNL	20954	17476	-2.584	-0.6006	Yes
85	CREBBP	22682 8783	17516	-2.659	-0.5849	Yes
86	GIT2	11174 6462	17572	-2.781	-0.5694	Yes
87	SH3BP2	16874	17663	-2.971	-0.5544	Yes
88	WAS	24193	17688	-3.040	-0.5354	Yes
89	SYK	21636	17785	-3.326	-0.5184	Yes
90	DNM2	4635 3103	17822	-3.423	-0.4975	Yes
91	CRKL	4560	17866	-3.568	-0.4760	Yes
92	SH2D2A	6569	17915	-3.712	-0.4538	Yes
93	JUN	15832	17929	-3.751	-0.4294	Yes
94	DTX1	16396	17992	-3.927	-0.4066	Yes
95	WIPF1	14560	18027	-4.039	-0.3814	Yes
96	VAV1	23173	18053	-4.129	-0.3552	Yes
97	BCL10	15397	18173	-4.717	-0.3302	Yes
98	PTK2B	21776	18273	-5.239	-0.3005	Yes
99	CBLB	5531 22734	18286	-5.302	-0.2658	Yes
100	ABI1	4300	18324	-5.473	-0.2313	Yes
101	LCK	15746	18405	-6.029	-0.1953	Yes
102	WASF2	6326	18455	-6.597	-0.1539	Yes
103	PTPN6	17002	18509	-7.257	-0.1083	Yes
104	NEDD9	3206 21483	18547	-7.820	-0.0581	Yes
105	MAPK1	1642 11167	18603	-9.259	0.0007	Yes