Details for gene set NETPATH

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	NETPATH_BCR
Enrichment Score (ES)	-0.6449906
Normalized Enrichment Score (NES)	-1.6132458
Nominal p-value	0.0
FDR q-value	0.04336412
FWER p-Value	0.492

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PTK2	22271	8	10.070	0.0420	No
2	CCNE1	17857	159	6.569	0.0615	No
3	DOK3	3229 21451	182	6.330	0.0870	No
4	CYCS	8821	708	3.673	0.0740	No
5	MAP3K7	16255	878	3.198	0.0784	No
6	BAX	17832	898	3.158	0.0906	No
7	RPS6	9757	1433	2.175	0.0709	No
8	CDK2	3438 3373 19592 3322	1447	2.143	0.0792	No
9	IKBKB	4907	1483	2.082	0.0861	No
10	CHUK	23665	1487	2.079	0.0947	No
11	MAPK8	6459	2014	1.381	0.0721	No
12	RPS6KA1	15725	2164	1.195	0.0691	No
13	CCNA2	15357	2326	1.015	0.0646	No
14	BLNK	23681 3691	2670	0.771	0.0493	No
15	CDK6	16600	3298	0.374	0.0170	No
16	BCL2	8651 3928 13864 4435 981 4062 13863 4027	3317	0.365	0.0176	No
17	BCL2L11	2790 14861	3657	0.259	0.0004	No
18	CD5	23741	3750	0.237	-0.0036	No
19	RAPGEF1	4218 2860	3925	0.206	-0.0121	No
20	AKT1	8568	4184	0.164	-0.0254	No
21	PIK3R2	18850	4208	0.163	-0.0260	No
22	BCAR1	18741	4251	0.158	-0.0276	No
23	SHC1	9813 9812 5430	4421	0.139	-0.0361	No
24	ITK	4934	4876	0.104	-0.0602	No
25	IKBKG	2570 2562 4908	5302	0.081	-0.0828	No
26	NCK1	9447 5152	5996	0.056	-0.1201	No
27	CR2	3942 13707	6213	0.051	-0.1315	No
28	ACTR3	13166	6253	0.049	-0.1334	No
29	ZAP70	14271 4042	6321	0.048	-0.1368	No
30	PRKCE	9575	7969	0.020	-0.2258	No
31	DAPP1	11159 6445 6446	8472	0.013	-0.2529	No
32	PPP3CA	1863 5284	9030	0.006	-0.2829	No
33	LYN	16281	9750	-0.003	-0.3218	No
34	PLCG1	14753	9775	-0.004	-0.3231	No
35	MAPK4	23409	9852	-0.005	-0.3271	No
36	CDK7	21365	10035	-0.007	-0.3370	No
37	ACTR2	20523	10132	-0.008	-0.3421	No
38	PPP3R1	9611 489	10273	-0.010	-0.3496	No
39	NFATC2	5168 2866	10619	-0.014	-0.3682	No
40	DOK1	17104 1018 1177	10626	-0.015	-0.3685	No
41	SOS1	5476	10751	-0.016	-0.3751	No
42	PIP5K1C	5250 19929	11474	-0.027	-0.4140	No
43	PIK3R1	3170	11694	-0.031	-0.4257	No
44	CBL	19154	11843	-0.033	-0.4336	No
45	PTPN11	5326 16391 9660	12087	-0.038	-0.4466	No
46	CREB1	3990 8782 4558 4093	12096	-0.038	-0.4468	No
47	CDK4	3424 19859	12800	-0.055	-0.4846	No
48	CRK	4559 1249	13780	-0.096	-0.5371	No
49	LCP2	4988 9268	14104	-0.118	-0.5541	No
50	GAB2	1821 18184 2025	14159	-0.123	-0.5565	No
51	VAV2	5848 2670	14239	-0.130	-0.5602	No
52	PRKD1	2074 21075	14288	-0.135	-0.5622	No
53	PRKCQ	2873 2831	14839	-0.204	-0.5911	No
54	GSK3A	405	14869	-0.210	-0.5918	No
55	FYN	3375 3395 20052	15076	-0.254	-0.6018	No
56	RPS6KB1	7815 1207 13040	15117	-0.261	-0.6029	No
57	ATF2	4418 2759	15353	-0.322	-0.6142	No
58	PTPRC	5327 9662	15502	-0.380	-0.6206	No
59	PDK2	20285	15551	-0.404	-0.6215	No
60	CASP9	16001 2410 2458	15567	-0.410	-0.6206	No
61	ITPR2	9194	15707	-0.466	-0.6262	No
62	HCK	14787	15955	-0.616	-0.6369	No
63	CASP7	23826	16022	-0.678	-0.6376	No
64	REL	9716	16159	-0.818	-0.6415	Yes
65	CARD11	8436	16201	-0.863	-0.6401	Yes
66	BTK	24061	16235	-0.895	-0.6381	Yes
67	RASA1	10174	16303	-0.967	-0.6377	Yes
68	CD22	17881	16316	-0.978	-0.6342	Yes
69	MAPK14	23313	16395	-1.021	-0.6341	Yes
70	NFATC3	5169	16404	-1.032	-0.6302	Yes
71	PRKCD	21897	16559	-1.188	-0.6336	Yes
72	MAPK3	6458 11170	16645	-1.295	-0.6327	Yes
73	HDAC5	1480 20205	16676	-1.338	-0.6287	Yes
74	MAP4K1	18313	16826	-1.546	-0.6302	Yes
75	TEC	16514	16891	-1.651	-0.6267	Yes
76	CD19	17640	16921	-1.697	-0.6212	Yes
77	SOS2	21049	16958	-1.731	-0.6158	Yes
78	GTF2I	16353 5491 9863 3280 3184	16975	-1.748	-0.6093	Yes
79	CCND2	16987	17040	-1.850	-0.6050	Yes
80	PIK3AP1	23679	17057	-1.885	-0.5979	Yes
81	RASGRP3	10767	17096	-1.946	-0.5918	Yes
82	GRB2	20149	17099	-1.953	-0.5837	Yes
83	PTPN18	14279	17310	-2.320	-0.5853	Yes
84	NFATC1	23398 1999 5167 9455 1985 1957	17547	-2.734	-0.5865	Yes
85	CCND3	4489 4490	17589	-2.825	-0.5768	Yes
86	FCGR2B	8959	17622	-2.880	-0.5665	Yes
87	SH3BP2	16874	17663	-2.971	-0.5561	Yes
88	WAS	24193	17688	-3.040	-0.5446	Yes
89	LAT2	16351	17736	-3.151	-0.5339	Yes
90	GSK3B	22761	17749	-3.186	-0.5211	Yes
91	CD79B	20185 1309	17759	-3.226	-0.5080	Yes
92	RB1	21754	17773	-3.276	-0.4949	Yes
93	CD79A	18342	17781	-3.312	-0.4814	Yes
94	SYK	21636	17785	-3.326	-0.4675	Yes
95	NFKBIA	21065	17794	-3.356	-0.4539	Yes
96	RELA	23783	17808	-3.389	-0.4403	Yes
97	CRKL	4560	17866	-3.568	-0.4284	Yes
98	JUN	15832	17929	-3.751	-0.4159	Yes
99	VAV1	23173	18053	-4.129	-0.4052	Yes
100	HCLS1	22770	18103	-4.347	-0.3895	Yes
101	CD81	8719	18143	-4.545	-0.3725	Yes
102	BCL10	15397	18173	-4.717	-0.3542	Yes
103	CSK	8805	18265	-5.201	-0.3372	Yes
104	PDPK1	23097	18270	-5.228	-0.3155	Yes
105	PTK2B	21776	18273	-5.239	-0.2935	Yes
106	CBLB	5531 22734	18286	-5.302	-0.2718	Yes
107	GAB1	18828	18330	-5.503	-0.2510	Yes
108	MAPKAPK2	13838	18361	-5.702	-0.2286	Yes
109	LCK	15746	18405	-6.029	-0.2056	Yes
110	PTPN6	17002	18509	-7.257	-0.1806	Yes
111	NEDD9	3206 21483	18547	-7.820	-0.1497	Yes
112	BCL6	22624	18584	-8.751	-0.1148	Yes
113	CD72	8718	18591	-8.983	-0.0773	Yes
114	MAPK1	1642 11167	18603	-9.259	-0.0389	Yes
115	BLK	3205 21791	18607	-9.402	0.0005	Yes