Details for gene set V$LMO2COM

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB_repos
Phenotype	phenotype_transDMpreB_versus_DMpreB.cls#transDMpreB_versus_DMpreB_repos
Upregulated in class	transDMpreB
GeneSet	V$LMO2COM_01
Enrichment Score (ES)	0.5130813
Normalized Enrichment Score (NES)	1.5165662
Nominal p-value	0.0
FDR q-value	0.16863576
FWER p-Value	0.763

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TRIM8	23824	5	3.715	0.0503	Yes
2	MAP3K14	11998	27	2.958	0.0894	Yes
3	CREBBP	22682 8783	133	2.312	0.1152	Yes
4	DOCK9	8369	135	2.291	0.1463	Yes
5	CENTB1	20378	228	2.096	0.1698	Yes
6	SORCS2	16553	382	1.794	0.1859	Yes
7	SLC4A1	20204	402	1.763	0.2089	Yes
8	BCL9L	19475	495	1.633	0.2262	Yes
9	ANP32A	8592 4387 19415	514	1.618	0.2472	Yes
10	PPM1A	5279 9607	556	1.551	0.2661	Yes
11	TMEM24	19150	600	1.490	0.2840	Yes
12	E2F1	14384	657	1.419	0.3003	Yes
13	VPREB1	5859	723	1.332	0.3149	Yes
14	EXTL3	21785 21786 3088	724	1.330	0.3330	Yes
15	MAP3K3	20626	808	1.254	0.3456	Yes
16	DCTN1	1100 17392	895	1.166	0.3568	Yes
17	LRP10	22018	906	1.156	0.3720	Yes
18	KEAP1	19213 3080 3142	993	1.058	0.3817	Yes
19	DMTF1	887 3662 16928 3530	1067	1.009	0.3915	Yes
20	NFE2	9456	1087	1.001	0.4041	Yes
21	PSIP1	4159 2507 8319	1095	0.999	0.4173	Yes
22	GNAS	9025 2963 2752	1162	0.961	0.4268	Yes
23	ZRANB1	6884 11702	1201	0.927	0.4374	Yes
24	MYADM	11946	1215	0.920	0.4492	Yes
25	IDE	4893	1227	0.912	0.4610	Yes
26	RPL28	5392	1555	0.704	0.4529	Yes
27	OSR1	18971	1655	0.653	0.4564	Yes
28	ELL3	14455	1713	0.620	0.4617	Yes
29	MTUS1	4162 158	1859	0.533	0.4611	Yes
30	PRKCZ	5260	1877	0.520	0.4673	Yes
31	UNC13B	10255	1907	0.503	0.4725	Yes
32	PPP2R5C	6522 2147	1988	0.466	0.4745	Yes
33	B4GALT6	7109 12115	2031	0.446	0.4783	Yes
34	EIF2B4	16574	2064	0.435	0.4825	Yes
35	CCND2	16987	2088	0.425	0.4871	Yes
36	CRELD1	17329	2128	0.409	0.4905	Yes
37	CPNE1	11186	2135	0.406	0.4957	Yes
38	AMD1	8583	2155	0.398	0.5001	Yes
39	CD79A	18342	2161	0.395	0.5052	Yes
40	MDGA1	13231	2201	0.384	0.5083	Yes
41	GATA2	17370	2259	0.366	0.5102	Yes
42	IGF2	17550	2506	0.291	0.5008	Yes
43	CNNM2	8251	2573	0.276	0.5010	Yes
44	SLC23A2	14421	2598	0.270	0.5034	Yes
45	TNFSF13	12806	2618	0.265	0.5059	Yes
46	RPS6KB1	7815 1207 13040	2699	0.250	0.5050	Yes
47	CDH2	1963 8727 8726 4508	2701	0.250	0.5084	Yes
48	BNC2	15850	2836	0.228	0.5042	Yes
49	SMPD3	18757	2848	0.226	0.5067	Yes
50	MAZ	1327 17623	2901	0.216	0.5068	Yes
51	PTPRJ	9664	2913	0.213	0.5091	Yes
52	WTAP	7215	2917	0.212	0.5118	Yes
53	CENTG3	3462 16905 3596	2947	0.208	0.5131	Yes
54	ALX3	15456	3163	0.177	0.5038	No
55	PPP1R16B	6014	3381	0.149	0.4941	No
56	IRF1	1336 1258 1433 9182	3435	0.144	0.4932	No
57	OXR1	9300 2271	3497	0.138	0.4917	No
58	WNT3A	20431	3647	0.126	0.4854	No
59	NEURL	5164	3823	0.113	0.4774	No
60	PAX9	21266	3859	0.110	0.4770	No
61	SEMA6A	23439 9802	4042	0.100	0.4685	No
62	MLLT6	20678	4195	0.090	0.4615	No
63	FGR	4723	4299	0.084	0.4571	No
64	RIN1	10349	4300	0.084	0.4582	No
65	HAPLN2	15296	4351	0.082	0.4566	No
66	TRIM23	8165 3230	4389	0.081	0.4557	No
67	CYP26A1	23871 3695	4425	0.079	0.4549	No
68	DLG1	22793 1672	4679	0.069	0.4421	No
69	FOSL1	23779	4717	0.068	0.4410	No
70	ADCY8	22281	4797	0.065	0.4376	No
71	FGF8	23656	4879	0.063	0.4341	No
72	ERBB3	19593	5331	0.050	0.4103	No
73	TCF21	3437	5487	0.046	0.4025	No
74	INVS	2397 16211	5508	0.046	0.4021	No
75	PCSK4	19696 3296 3394 18705	5555	0.045	0.4002	No
76	GPR156	10753 22763	5577	0.044	0.3997	No
77	RORC	9732	5591	0.044	0.3995	No
78	PCDHA10	8792	5650	0.043	0.3970	No
79	NHLH1	13754	5941	0.037	0.3818	No
80	PADI4	2424 9547	6026	0.035	0.3777	No
81	KCNIP2	23655 3725	6122	0.034	0.3730	No
82	CHRND	3931 4084	6182	0.033	0.3702	No
83	LRRN1	17343	6282	0.031	0.3653	No
84	BARHL1	14634	6379	0.030	0.3605	No
85	JAG1	14415	6538	0.027	0.3523	No
86	CITED2	5118 14477	6554	0.027	0.3519	No
87	IMPDH1	17197 1131	7187	0.018	0.3178	No
88	MAP3K4	23126	7801	0.010	0.2847	No
89	OTX2	9519	7989	0.008	0.2747	No
90	AP1S2	8423 4228	8028	0.007	0.2727	No
91	FGF11	20383	8220	0.005	0.2624	No
92	DNMT3A	2167 21330	8385	0.003	0.2536	No
93	CRABP2	15554	8426	0.003	0.2515	No
94	NRK	6559	8480	0.002	0.2486	No
95	TJP1	17803	8481	0.002	0.2487	No
96	NPEPPS	20273	8508	0.002	0.2473	No
97	FGF7	8965	8584	0.001	0.2432	No
98	HIF3A	11989 3784 2303	8606	0.001	0.2421	No
99	COL12A1	3143 19054	8716	-0.001	0.2362	No
100	TGFB3	10161	8719	-0.001	0.2361	No
101	FGF12	1723 22621	8735	-0.001	0.2353	No
102	BHLHB5	15629	8991	-0.004	0.2215	No
103	KCNN3	15538 1913	9031	-0.004	0.2194	No
104	PDGFB	22199 2311	9172	-0.006	0.2119	No
105	PCDHA6	2038 8788	9177	-0.006	0.2118	No
106	JUB	21834 3339	9413	-0.009	0.1992	No
107	INHA	14214	9587	-0.011	0.1900	No
108	FSCN2	20569	9675	-0.013	0.1854	No
109	MYO1E	7742	9957	-0.016	0.1704	No
110	KIF5B	4955 2031	9963	-0.016	0.1704	No
111	ATP2B3	24308 11557	9968	-0.016	0.1704	No
112	NUMBL	1663 9496	10090	-0.018	0.1640	No
113	EVX1	17442	10160	-0.019	0.1606	No
114	HOXD10	14983	10206	-0.020	0.1584	No
115	CCNL2	15957	10239	-0.020	0.1569	No
116	KAZALD1	4206	10464	-0.023	0.1451	No
117	STMN2	15638	10503	-0.024	0.1434	No
118	CALM3	8682	10585	-0.025	0.1393	No
119	NR3C2	18562 13798	10682	-0.026	0.1345	No
120	HOXA11	17146	10778	-0.028	0.1297	No
121	IL17C	18438	10951	-0.030	0.1208	No
122	ITGA7	19835	11089	-0.032	0.1138	No
123	GRIN1	9041 4804	11253	-0.035	0.1054	No
124	IGFBP5	4899	11262	-0.035	0.1055	No
125	LMO1	17685	11323	-0.036	0.1027	No
126	RARG	22113	11828	-0.045	0.0760	No
127	VDR	5852 10285	12129	-0.052	0.0604	No
128	HCRTR2	6907	12302	-0.056	0.0519	No
129	EMID2	16336	12468	-0.061	0.0437	No
130	L3MBTL2	22415	12491	-0.061	0.0434	No
131	NRG2	4274	12885	-0.074	0.0231	No
132	SLC38A3	13319	12937	-0.076	0.0213	No
133	BCL6	22624	13041	-0.079	0.0168	No
134	CALB1	4469	13044	-0.080	0.0178	No
135	CLSTN3	17006	13070	-0.080	0.0175	No
136	CAMK1D	5977 2948	13212	-0.086	0.0111	No
137	GAB2	1821 18184 2025	13330	-0.091	0.0060	No
138	WNT6	5881	13500	-0.099	-0.0019	No
139	CKM	18362	13520	-0.100	-0.0015	No
140	PLEC1	2273 2198 2205 2178 2230 22247 2213 2231 2295 2172 5263 2266	13573	-0.103	-0.0029	No
141	FHL3	16092 2457	13741	-0.112	-0.0105	No
142	GNG8	18378	13802	-0.115	-0.0122	No
143	SH2D3C	2864	13815	-0.116	-0.0112	No
144	ELMO1	3275 8939 3202 3271 3254 3235 3164 3175 3274 3188 3293 3214 3218 3239	13839	-0.118	-0.0109	No
145	PCDHA1	8571 4368	13985	-0.127	-0.0170	No
146	GJB4	4782	14162	-0.138	-0.0247	No
147	WNT9A	5709	14415	-0.162	-0.0361	No
148	TNFRSF21	8244	14480	-0.168	-0.0373	No
149	GNG13	23338	14728	-0.194	-0.0481	No
150	ADAM12	2207 8545	14818	-0.205	-0.0501	No
151	KCNB1	14334	14865	-0.211	-0.0497	No
152	EPHA2	16006	14984	-0.226	-0.0531	No
153	MAPT	9420 1347	15056	-0.234	-0.0537	No
154	SYT4	5566	15212	-0.257	-0.0586	No
155	NR2E1	19780	15278	-0.269	-0.0585	No
156	RUNX1	4481	15616	-0.335	-0.0722	No
157	DNAJC11	2486 6068	15742	-0.364	-0.0740	No
158	HMGN2	9095	15925	-0.409	-0.0783	No
159	PIM2	5249 9564 9565	15952	-0.417	-0.0741	No
160	SRM	9890 2525	15969	-0.422	-0.0692	No
161	SNX17	3495 16885	16267	-0.504	-0.0784	No
162	RANBP9	21480	16304	-0.518	-0.0733	No
163	PARD6A	12142	16854	-0.748	-0.0929	No
164	MESDC1	17771	16890	-0.765	-0.0844	No
165	FBXW9	18540	16948	-0.797	-0.0766	No
166	SERF2	11714	17008	-0.832	-0.0685	No
167	COMMD5	7289	17239	-0.944	-0.0681	No
168	HES6	13882 4058	17445	-1.035	-0.0652	No
169	DDB1	23931	17493	-1.060	-0.0533	No
170	PRKAG1	22135	18092	-1.496	-0.0654	No
171	ATP1B1	4420	18129	-1.539	-0.0464	No
172	ARRDC3	4191	18215	-1.643	-0.0286	No
173	ADRA2C	16869	18316	-1.802	-0.0095	No
174	GFRA1	9015	18358	-1.890	0.0140	No