Details for gene set V$GRE

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB_repos
Phenotype	phenotype_transDMpreB_versus_DMpreB.cls#transDMpreB_versus_DMpreB_repos
Upregulated in class	DMpreB
GeneSet	V$GRE_C
Enrichment Score (ES)	-0.47040588
Normalized Enrichment Score (NES)	-1.2440366
Nominal p-value	0.097426474
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BTK	24061	118	2.378	0.0713	No
2	MEF2C	3204 9378	403	1.759	0.1135	No
3	SORL1	5474	904	1.159	0.1244	No
4	ST13	12865	1500	0.738	0.1164	No
5	GPD1	22361	2290	0.357	0.0855	No
6	NOTCH4	23277 9475	2649	0.260	0.0747	No
7	NSD1	2134 5197	2698	0.250	0.0803	No
8	FGF17	21757	3061	0.193	0.0670	No
9	FERD3L	21292	3176	0.175	0.0666	No
10	THRAP1	20309	3250	0.165	0.0680	No
11	CDKN2C	15806 2321	3285	0.161	0.0715	No
12	MBNL2	21932	3499	0.138	0.0645	No
13	SCNN1A	17278	3537	0.135	0.0669	No
14	SFRS6	14751	3569	0.133	0.0696	No
15	LUC7L	47 1520	3762	0.117	0.0631	No
16	PAX3	13910	4251	0.087	0.0396	No
17	SEMA3A	16919	4428	0.079	0.0326	No
18	ELAVL4	15805 4889 9137	4859	0.063	0.0115	No
19	NPR2	16230	4955	0.060	0.0083	No
20	CDKL5	24019	5330	0.050	-0.0102	No
21	SLC7A2	4431 8644	5478	0.046	-0.0166	No
22	ANGPTL2	15032 18104	5519	0.046	-0.0173	No
23	KIF13A	21475	6156	0.033	-0.0505	No
24	PRRX1	9595 5271	6195	0.033	-0.0515	No
25	ATF7	10303 5869	6344	0.030	-0.0585	No
26	TIAL1	996 5753	6360	0.030	-0.0583	No
27	CUZD1	17598	6950	0.021	-0.0894	No
28	NDUFS1	13940	6971	0.020	-0.0898	No
29	PPIL5	21255	7335	0.016	-0.1089	No
30	PIK3R1	3170	7780	0.010	-0.1325	No
31	LSAMP	1690 6500	7988	0.008	-0.1435	No
32	KCNA5	9203	8590	0.001	-0.1759	No
33	CHST9	7727	8831	-0.002	-0.1887	No
34	DCX	24040 8841 4604	8883	-0.002	-0.1914	No
35	NRG1	3885	8910	-0.003	-0.1927	No
36	KCTD15	17864	9012	-0.004	-0.1981	No
37	RIMS2	4370	9140	-0.006	-0.2047	No
38	MYL3	19291	10129	-0.019	-0.2574	No
39	CTGF	20068	10415	-0.022	-0.2721	No
40	BDNF	14926 2797	10474	-0.023	-0.2745	No
41	NNAT	2764 5180	10997	-0.031	-0.3016	No
42	ADK	3302 3454 8555	11121	-0.033	-0.3072	No
43	OTX1	20517	11153	-0.033	-0.3078	No
44	SMPX	24220	11165	-0.034	-0.3073	No
45	PRDM1	19775 3337	11223	-0.034	-0.3092	No
46	ROS1	19771	11761	-0.044	-0.3367	No
47	ONECUT2	10346	11772	-0.044	-0.3358	No
48	ARX	24290	11981	-0.048	-0.3455	No
49	HOXA3	9108 1075	12131	-0.052	-0.3518	No
50	LMOD1	14119	12532	-0.062	-0.3714	No
51	RTKN	17394 1156	12647	-0.066	-0.3753	No
52	LOXL1	5002	12708	-0.068	-0.3764	No
53	PRG4	13592 4036	13005	-0.078	-0.3898	No
54	GAB2	1821 18184 2025	13330	-0.091	-0.4043	No
55	WIF1	19866	13885	-0.120	-0.4303	No
56	HOXC6	22339 2302	13907	-0.121	-0.4274	No
57	LHX6	9275 2914	14128	-0.136	-0.4349	No
58	TCF12	10044 3125	14586	-0.178	-0.4537	No
59	ATP1A3	21	14615	-0.181	-0.4493	No
60	SALL2	21840	14785	-0.200	-0.4519	No
61	MYCT1	7572	14882	-0.214	-0.4501	No
62	HOXC4	4864	15252	-0.263	-0.4614	Yes
63	AP4M1	3499 16656	15420	-0.292	-0.4609	Yes
64	LRRN3	21077	15543	-0.317	-0.4571	Yes
65	SNX16	15374	15577	-0.326	-0.4482	Yes
66	ATP5G3	14558	15683	-0.351	-0.4424	Yes
67	MT2A	18523	15769	-0.369	-0.4349	Yes
68	JPH1	13994	15799	-0.377	-0.4241	Yes
69	SF3B1	13954	15970	-0.423	-0.4195	Yes
70	UBE3A	1209 1084 1830	16039	-0.443	-0.4087	Yes
71	LZTS2	10362	16172	-0.479	-0.4002	Yes
72	EEF1B2	4131 12063	16213	-0.489	-0.3864	Yes
73	NR2F1	7015 21401	16502	-0.589	-0.3827	Yes
74	METAP1	15154	16611	-0.637	-0.3677	Yes
75	CSNK1G1	3057 5671 19397	16724	-0.687	-0.3513	Yes
76	RAB11A	7013	17231	-0.939	-0.3479	Yes
77	TANK	2839 15006 2729	17296	-0.975	-0.3195	Yes
78	GNB1L	8921 22827	17369	-1.001	-0.2907	Yes
79	RAB10	2090 21119	17619	-1.134	-0.2671	Yes
80	EGR1	23598	18043	-1.444	-0.2427	Yes
81	MAPK6	19062	18044	-1.445	-0.1955	Yes
82	PRKAG1	22135	18092	-1.496	-0.1492	Yes
83	RRAGD	11964	18227	-1.664	-0.1020	Yes
84	MCM7	9372 3568	18319	-1.807	-0.0479	Yes
85	TMOD3	6945	18397	-1.954	0.0118	Yes