Details for gene set V$FREAC7

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB_repos
Phenotype	phenotype_transDMpreB_versus_DMpreB.cls#transDMpreB_versus_DMpreB_repos
Upregulated in class	DMpreB
GeneSet	V$FREAC7_01
Enrichment Score (ES)	-0.41488892
Normalized Enrichment Score (NES)	-1.1483755
Nominal p-value	0.16396396
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TRIM8	23824	5	3.715	0.0980	No
2	GOLGA1	14595	488	1.641	0.1154	No
3	CSNK1G3	12873	892	1.169	0.1245	No
4	TAZ	12415	1487	0.750	0.1122	No
5	NFRKB	10642	1642	0.660	0.1213	No
6	NFYA	5172	1703	0.626	0.1347	No
7	RAB5B	359 19591 3430	2096	0.421	0.1246	No
8	STOML2	15902	2180	0.388	0.1304	No
9	EPN1	18401	2291	0.357	0.1339	No
10	BNC2	15850	2836	0.228	0.1105	No
11	CSNK1E	6570 2211 11332	3242	0.166	0.0930	No
12	ELK3	4663 94 3388	3251	0.165	0.0969	No
13	PIK3C2A	17667	3326	0.156	0.0970	No
14	FLOT1	23249 1613	3461	0.141	0.0935	No
15	UBE2H	5823 5822	3809	0.114	0.0778	No
16	SSH3	3709 10890	4039	0.100	0.0680	No
17	PAX3	13910	4251	0.087	0.0589	No
18	CSF3	1394 20671	4443	0.078	0.0506	No
19	IBSP	16775	4564	0.073	0.0461	No
20	TNFSF15	15863	4710	0.068	0.0400	No
21	OGG1	17331	4763	0.066	0.0390	No
22	MID1	5097 5098	4780	0.065	0.0398	No
23	CH25H	23695	4813	0.065	0.0398	No
24	NTF3	16991	4816	0.064	0.0414	No
25	RUNX2	4480 8700	5008	0.058	0.0326	No
26	SDHD	19125	5278	0.051	0.0194	No
27	DNAJA4	19446	5607	0.044	0.0029	No
28	FLRT3	7730 12930 2673	5651	0.043	0.0017	No
29	ABCA1	15881	5965	0.036	-0.0143	No
30	GRM3	16929	6116	0.034	-0.0215	No
31	HAND2	18615	6152	0.033	-0.0225	No
32	LCP2	4988 9268	6264	0.031	-0.0277	No
33	ACCN1	20327 1194	6365	0.030	-0.0323	No
34	TSHB	15218	6369	0.030	-0.0317	No
35	GPR109B	16374	6435	0.029	-0.0344	No
36	POU2F1	5275 3989 4065 4010	6540	0.027	-0.0394	No
37	DEPDC2	14295	6543	0.027	-0.0387	No
38	SYT6	13437 7042 12040	6616	0.026	-0.0420	No
39	PLAG1	7148 15949 12161	6686	0.025	-0.0450	No
40	CRH	8784	6825	0.023	-0.0519	No
41	PCDHB6	8224	6998	0.020	-0.0607	No
42	GPR110	23234	7221	0.017	-0.0722	No
43	CLDN8	22549 1747	7386	0.015	-0.0807	No
44	PCDH11X	2559	7490	0.014	-0.0859	No
45	KIAA1715	7629	7526	0.013	-0.0874	No
46	RNF17	11389	8124	0.006	-0.1196	No
47	CXCL2	9790	8251	0.005	-0.1262	No
48	COL13A1	8763	8288	0.005	-0.1281	No
49	TWIST1	21291	8501	0.002	-0.1395	No
50	UBR1	5828	8690	-0.000	-0.1496	No
51	NRG1	3885	8910	-0.003	-0.1614	No
52	NPPB	15994	8924	-0.003	-0.1620	No
53	NIN	9463 2103	8964	-0.003	-0.1641	No
54	KCTD15	17864	9012	-0.004	-0.1665	No
55	NEUROD2	20262	9204	-0.006	-0.1766	No
56	CGA	16246	9520	-0.011	-0.1934	No
57	NEDD4	19384 3101	9763	-0.014	-0.2061	No
58	GDF8	9411	9791	-0.014	-0.2072	No
59	BCL11B	7190	9826	-0.015	-0.2087	No
60	EN1	387 14155	10178	-0.019	-0.2271	No
61	TCF7L2	10048 5646	10216	-0.020	-0.2286	No
62	CTGF	20068	10415	-0.022	-0.2387	No
63	BAI3	5580	10504	-0.024	-0.2429	No
64	TYR	17763	10535	-0.024	-0.2438	No
65	EN2	16898	10730	-0.027	-0.2536	No
66	HOXA11	17146	10778	-0.028	-0.2554	No
67	MGLL	17368 1145	10934	-0.030	-0.2630	No
68	IL17C	18438	10951	-0.030	-0.2631	No
69	HIVEP3	4973	11020	-0.031	-0.2659	No
70	CXXC5	12523	11134	-0.033	-0.2712	No
71	SNCAIP	12589	11176	-0.034	-0.2725	No
72	BAMBI	23629	11188	-0.034	-0.2722	No
73	SOX2	9849 15612	11229	-0.034	-0.2735	No
74	FOXD3	9088	11289	-0.035	-0.2757	No
75	FEZ1	19520 3100	11346	-0.036	-0.2778	No
76	FST	8985	11763	-0.044	-0.2991	No
77	SSBP3	2439 7814 2431	11832	-0.046	-0.3016	No
78	TYRO3	5811	11890	-0.047	-0.3034	No
79	RGMA	18213	11898	-0.047	-0.3026	No
80	VCP	11254	12012	-0.049	-0.3074	No
81	PPP1CB	5282 3529 3504	12239	-0.055	-0.3182	No
82	ATP1B4	12586	12284	-0.056	-0.3191	No
83	NRAS	5191	12495	-0.061	-0.3288	No
84	GATA4	21792 4755	12595	-0.064	-0.3325	No
85	NEUROD6	17138	12610	-0.065	-0.3315	No
86	BRUNOL4	2010 4229	13352	-0.091	-0.3691	No
87	HOXA10	17145 989	13519	-0.100	-0.3755	No
88	PLEC1	2273 2198 2205 2178 2230 22247 2213 2231 2295 2172 5263 2266	13573	-0.103	-0.3756	No
89	ELMO1	3275 8939 3202 3271 3254 3235 3164 3175 3274 3188 3293 3214 3218 3239	13839	-0.118	-0.3868	No
90	MCART1	10492	13868	-0.119	-0.3852	No
91	ETV5	22630	14139	-0.137	-0.3962	No
92	PTF1A	15110	14215	-0.143	-0.3964	No
93	FGF9	8966	14217	-0.143	-0.3927	No
94	BEX2	24055	14376	-0.157	-0.3971	No
95	HESX1	22070	14706	-0.191	-0.4098	Yes
96	EFNA5	4655 8884	14762	-0.198	-0.4076	Yes
97	GTF2A1	2064 8187 8188 13512	14827	-0.206	-0.4056	Yes
98	RHOBTB1	12789	14848	-0.209	-0.4011	Yes
99	NDST4	12259 7228	14890	-0.215	-0.3977	Yes
100	SEMA6D	2800 14876 90	15148	-0.248	-0.4050	Yes
101	POGZ	6031 1911	15192	-0.255	-0.4006	Yes
102	PACSIN3	14948 8149 2776 2665	15236	-0.261	-0.3960	Yes
103	HOXC4	4864	15252	-0.263	-0.3899	Yes
104	DTNA	8870 4647 23611 1991	15379	-0.285	-0.3892	Yes
105	HOXB4	20686	15485	-0.307	-0.3867	Yes
106	PIAS1	7126	15828	-0.383	-0.3951	Yes
107	CACNA2D3	8677	15997	-0.430	-0.3928	Yes
108	ZADH2	23501	16081	-0.453	-0.3853	Yes
109	NFIB	15855	16096	-0.456	-0.3740	Yes
110	JUNB	9201	16520	-0.594	-0.3811	Yes
111	CLDN23	18893	16608	-0.636	-0.3690	Yes
112	CDC42EP3	6436	17074	-0.867	-0.3712	Yes
113	GALNT1	8998 23609 8999 4750	17314	-0.984	-0.3581	Yes
114	BUB3	18045	17586	-1.118	-0.3432	Yes
115	IER3	23248	17679	-1.169	-0.3173	Yes
116	TGFB2	5743	17974	-1.384	-0.2965	Yes
117	RHOB	4411	18042	-1.444	-0.2620	Yes
118	PRKAG1	22135	18092	-1.496	-0.2250	Yes
119	ZHX2	11842	18096	-1.501	-0.1855	Yes
120	TIMM8B	11391	18239	-1.678	-0.1488	Yes
121	CHCHD7	16280	18243	-1.684	-0.1044	Yes
122	DRG1	1199 20553	18305	-1.786	-0.0605	Yes
123	MAGED2	24034	18586	-2.920	0.0016	Yes