Details for gene set V$FREAC4

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB_repos
Phenotype	phenotype_transDMpreB_versus_DMpreB.cls#transDMpreB_versus_DMpreB_repos
Upregulated in class	DMpreB
GeneSet	V$FREAC4_01
Enrichment Score (ES)	-0.43052527
Normalized Enrichment Score (NES)	-1.1354043
Nominal p-value	0.20347826
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CTCF	18490	1058	1.013	-0.0120	No
2	HSPG2	4884 16023	1457	0.766	0.0006	No
3	ULK1	16436	1603	0.681	0.0230	No
4	PHTF2	16599	1744	0.601	0.0422	No
5	SIN3A	5442	2144	0.402	0.0386	No
6	PUM2	2071 8161	2267	0.363	0.0481	No
7	EMP1	17260	2839	0.228	0.0275	No
8	FOXP2	4312 17523 8523	3032	0.196	0.0258	No
9	FERD3L	21292	3176	0.175	0.0259	No
10	PDE7A	9544 1788	3212	0.170	0.0316	No
11	AP1G2	2677 21827	3359	0.152	0.0304	No
12	MBNL2	21932	3499	0.138	0.0291	No
13	PDCD1LG2	23892	3602	0.130	0.0294	No
14	UBE2H	5823 5822	3809	0.114	0.0233	No
15	MCC	552	4162	0.092	0.0084	No
16	PTHR1	5318 18985	4388	0.081	-0.0002	No
17	IBSP	16775	4564	0.073	-0.0064	No
18	BTBD3	10457 2975 6007 6006	4703	0.068	-0.0108	No
19	SEMA5B	9801 22777	4790	0.065	-0.0125	No
20	TNMD	24260	5044	0.058	-0.0236	No
21	IER5	13802	5111	0.055	-0.0247	No
22	HR	3622 9119	5120	0.055	-0.0227	No
23	POU3F3	14261	5151	0.055	-0.0219	No
24	MYH2	20838	5153	0.054	-0.0195	No
25	SLC24A2	8020 13326 8021	5290	0.051	-0.0246	No
26	PITX2	15424 1878	5344	0.050	-0.0252	No
27	TECTA	19159	5423	0.048	-0.0273	No
28	ADRB1	4357	5569	0.044	-0.0332	No
29	NR4A1	9099	5872	0.038	-0.0478	No
30	PELI2	8217	6042	0.035	-0.0554	No
31	ALDH1A2	19386	6309	0.031	-0.0684	No
32	PLUNC	9593	6494	0.028	-0.0770	No
33	EYA1	4695 4061	6495	0.028	-0.0758	No
34	FOXB1	12254 19069	6547	0.027	-0.0774	No
35	CITED2	5118 14477	6554	0.027	-0.0765	No
36	TBX4	5633	6570	0.027	-0.0761	No
37	UBXD3	15701	6759	0.024	-0.0852	No
38	LEF1	1860 15420	7190	0.018	-0.1076	No
39	CALD1	4273 8463	7286	0.016	-0.1120	No
40	TAF5L	18712	7878	0.009	-0.1435	No
41	SLC34A3	14664	7892	0.009	-0.1439	No
42	TGFB3	10161	8719	-0.001	-0.1884	No
43	TCF1	16416	8752	-0.001	-0.1901	No
44	VIT	23155	8809	-0.002	-0.1931	No
45	PNRC1	15925	9096	-0.005	-0.2083	No
46	PURA	9670	9498	-0.010	-0.2295	No
47	GABRR1	16250	9700	-0.013	-0.2397	No
48	NEDD4	19384 3101	9763	-0.014	-0.2425	No
49	EVX1	17442	10160	-0.019	-0.2630	No
50	TCF7L2	10048 5646	10216	-0.020	-0.2651	No
51	PHEX	24024	10278	-0.021	-0.2675	No
52	ERG	1686 8915	10402	-0.022	-0.2731	No
53	SPRY4	23448	10636	-0.026	-0.2845	No
54	HOXA11	17146	10778	-0.028	-0.2909	No
55	NNAT	2764 5180	10997	-0.031	-0.3013	No
56	KLF12	4960 2637 21732 9228	11071	-0.032	-0.3038	No
57	OTX1	20517	11153	-0.033	-0.3067	No
58	PRDM1	19775 3337	11223	-0.034	-0.3089	No
59	FOXD3	9088	11289	-0.035	-0.3109	No
60	SYT10	22157	11503	-0.039	-0.3206	No
61	RARG	22113	11828	-0.045	-0.3361	No
62	HOXD9	14982	11829	-0.045	-0.3341	No
63	ROR1	6472	11897	-0.047	-0.3356	No
64	IGF1	3352 9156 3409	12058	-0.050	-0.3420	No
65	LOX	23438	12086	-0.051	-0.3412	No
66	LMO4	15151	12217	-0.054	-0.3458	No
67	TLX1	23839	12571	-0.064	-0.3620	No
68	TLE3	5767 19416	13026	-0.079	-0.3830	No
69	SHOX2	1802 5432	13097	-0.081	-0.3832	No
70	CAMK1D	5977 2948	13212	-0.086	-0.3855	No
71	OTOP3	20599	13474	-0.097	-0.3953	No
72	ODZ1	24168	13646	-0.107	-0.3998	No
73	CD109	6174 10656 19369	13670	-0.108	-0.3962	No
74	HEPH	24288 2623 2635 2568 2652	13725	-0.111	-0.3942	No
75	COLEC12	23624 8946	13809	-0.116	-0.3935	No
76	HOXC6	22339 2302	13907	-0.121	-0.3934	No
77	FGF9	8966	14217	-0.143	-0.4037	No
78	OSR2	22492	14700	-0.191	-0.4212	Yes
79	MSC	13998	14760	-0.198	-0.4156	Yes
80	NCDN	15756 2487 6471	14904	-0.217	-0.4137	Yes
81	CLDN18	19028	14912	-0.217	-0.4044	Yes
82	PER2	3940 13881	15008	-0.229	-0.3993	Yes
83	HOXC4	4864	15252	-0.263	-0.4007	Yes
84	SLC31A1	2447 16195	15611	-0.334	-0.4052	Yes
85	ZADH2	23501	16081	-0.453	-0.4104	Yes
86	ETHE1	18347	16372	-0.545	-0.4017	Yes
87	CDKN1A	4511 8729	16561	-0.617	-0.3845	Yes
88	KBTBD2	17137	17183	-0.913	-0.3773	Yes
89	ZFX	5984	18022	-1.426	-0.3591	Yes
90	PLS3	8332	18125	-1.534	-0.2964	Yes
91	DUSP1	23061	18133	-1.547	-0.2279	Yes
92	TRPS1	8195	18344	-1.859	-0.1565	Yes
93	GFRA1	9015	18358	-1.890	-0.0731	Yes
94	TMOD3	6945	18397	-1.954	0.0118	Yes