Details for gene set REACTOME_HIV

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB_repos
Phenotype	phenotype_transDMpreB_versus_DMpreB.cls#transDMpreB_versus_DMpreB_repos
Upregulated in class	DMpreB
GeneSet	REACTOME_HIV_INFECTION
Enrichment Score (ES)	-0.6340271
Normalized Enrichment Score (NES)	-1.7500781
Nominal p-value	0.0
FDR q-value	0.007836382
FWER p-Value	0.073

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NUP155	2298 5027	311	1.904	0.0056	No
2	GTF2F1	13599	318	1.883	0.0275	No
3	PSMB2	2324 16078	494	1.634	0.0373	No
4	ELL	18586	584	1.520	0.0504	No
5	LIG1	18388 1749 1493	670	1.402	0.0624	No
6	CCNT1	22140 11607	1002	1.050	0.0569	No
7	PACS1	23975	1008	1.045	0.0689	No
8	RANBP2	20019	1330	0.846	0.0615	No
9	NUP62	9497	1532	0.721	0.0592	No
10	KPNB1	20274	1674	0.643	0.0591	No
11	NUP107	8337	1954	0.481	0.0497	No
12	PSMD3	5803	2030	0.446	0.0509	No
13	PPIA	1284 11188	2164	0.393	0.0484	No
14	NUP160	14957	2748	0.241	0.0197	No
15	FEN1	8961	3090	0.188	0.0035	No
16	LIG4	11454	3210	0.171	-0.0010	No
17	TBP	671 1554	3303	0.158	-0.0041	No
18	TCEB3	15707	3375	0.150	-0.0061	No
19	PSME1	5300 9637	3639	0.127	-0.0189	No
20	PSMB9	23021	3824	0.113	-0.0275	No
21	PSMD10	2578 2597 24046	3855	0.111	-0.0278	No
22	PSMD4	15251	4024	0.100	-0.0357	No
23	POLR2C	9750	4458	0.078	-0.0582	No
24	ERCC2	1549 18363 3812	4596	0.072	-0.0647	No
25	HCK	14787	4919	0.061	-0.0814	No
26	NUP54	11231 11232 6516	4961	0.060	-0.0829	No
27	CD28	14239 4092	4981	0.059	-0.0833	No
28	TPR	927 4255	5663	0.042	-0.1196	No
29	B2M	72 14882	5712	0.042	-0.1217	No
30	AP2B1	12958 7752 12957 1280	5802	0.040	-0.1260	No
31	TAF10	10785	5865	0.038	-0.1289	No
32	TAF4	14319	6357	0.030	-0.1551	No
33	PSMA1	1627 17669	7105	0.019	-0.1953	No
34	RNGTT	10769 2354 6272	7529	0.013	-0.2180	No
35	PSMD5	2774 14612	8474	0.002	-0.2690	No
36	XRCC4	4238 8432	8973	-0.003	-0.2959	No
37	CDK7	21365	9267	-0.007	-0.3117	No
38	RANBP1	9692 5357	9289	-0.008	-0.3127	No
39	RAN	5356 9691	9465	-0.010	-0.3220	No
40	NUP153	21474	9500	-0.010	-0.3238	No
41	POLR2B	16817	9610	-0.012	-0.3295	No
42	XRCC5	14229	9669	-0.013	-0.3325	No
43	GTF2A2	10654	10157	-0.019	-0.3586	No
44	PSMA4	11179	10263	-0.020	-0.3640	No
45	NUP35	12803	11524	-0.039	-0.4317	No
46	PSMA5	6464	11660	-0.042	-0.4385	No
47	POLR2A	5394	12113	-0.052	-0.4623	No
48	CD4	16999	12204	-0.054	-0.4666	No
49	PSMA6	21270	12356	-0.058	-0.4741	No
50	XPO1	4172	13031	-0.079	-0.5096	No
51	TCEB2	12563 23102 7476	13069	-0.080	-0.5106	No
52	TAF9	3213 8433	13209	-0.086	-0.5171	No
53	ARF1	64	13575	-0.103	-0.5356	No
54	GTF2H1	4069 18236	14080	-0.132	-0.5613	No
55	CDK9	14619	14177	-0.139	-0.5649	No
56	PSMD8	7166	14395	-0.160	-0.5747	No
57	NUP188	15053	14398	-0.160	-0.5729	No
58	RNMT	7501	14503	-0.169	-0.5766	No
59	GTF2A1	2064 8187 8188 13512	14827	-0.206	-0.5916	No
60	AP1G1	4392	15128	-0.245	-0.6049	No
61	NUP93	7762	15520	-0.314	-0.6224	No
62	PSMD11	12772 7600	15592	-0.330	-0.6223	No
63	PSMD12	20621	15664	-0.347	-0.6221	No
64	FYN	3375 3395 20052	15886	-0.398	-0.6293	Yes
65	MNAT1	9396 2161	15949	-0.416	-0.6278	Yes
66	PSME3	20657	16006	-0.433	-0.6257	Yes
67	PSMB10	5299 18761	16020	-0.436	-0.6213	Yes
68	TAF13	8288	16047	-0.444	-0.6174	Yes
69	TAF6	16322 891	16105	-0.458	-0.6151	Yes
70	TH1L	14715	16116	-0.462	-0.6102	Yes
71	NCBP2	12643	16223	-0.492	-0.6101	Yes
72	POLR2E	3325 19699	16276	-0.508	-0.6070	Yes
73	GTF2B	10489	16522	-0.597	-0.6132	Yes
74	RAE1	12395	16554	-0.613	-0.6076	Yes
75	AP1B1	8599	16576	-0.624	-0.6014	Yes
76	PSMD7	18752 3825	16614	-0.638	-0.5959	Yes
77	PSMC6	7379	16655	-0.652	-0.5904	Yes
78	PSMC5	1348 20624	16737	-0.692	-0.5866	Yes
79	TAF12	2537 16058 2338	16807	-0.723	-0.5818	Yes
80	GTF2H2	6236	16895	-0.768	-0.5774	Yes
81	GTF2H3	5551	16901	-0.772	-0.5686	Yes
82	PAK2	10310 5875	16924	-0.783	-0.5605	Yes
83	TAF11	12733	16966	-0.807	-0.5532	Yes
84	RANGAP1	2180 22195	16983	-0.817	-0.5445	Yes
85	PSMC3	9636	16989	-0.820	-0.5351	Yes
86	RDBP	6589	17040	-0.853	-0.5277	Yes
87	XRCC6	2286 8991	17103	-0.878	-0.5207	Yes
88	POLR2J	16672	17132	-0.889	-0.5117	Yes
89	PSMC4	2141 17915	17184	-0.914	-0.5037	Yes
90	TAF5	23833 5934 3759	17191	-0.916	-0.4932	Yes
91	NUP37	3294 3326 19909	17218	-0.932	-0.4836	Yes
92	AP2A2	18009	17274	-0.963	-0.4753	Yes
93	PSMA3	9632 5298	17363	-1.000	-0.4682	Yes
94	ERCC3	23605	17381	-1.003	-0.4573	Yes
95	PSMB4	15252	17460	-1.042	-0.4492	Yes
96	CCNH	7322	17501	-1.064	-0.4388	Yes
97	BANF1	6216 10706 3760	17547	-1.087	-0.4285	Yes
98	PSMC2	16909	17578	-1.113	-0.4170	Yes
99	POLR2I	12839	17691	-1.175	-0.4092	Yes
100	KPNA1	22776	17694	-1.176	-0.3954	Yes
101	GTF2F2	21750	17807	-1.258	-0.3866	Yes
102	PSMC1	9635	17840	-1.277	-0.3733	Yes
103	PSMB1	23118	17872	-1.303	-0.3596	Yes
104	PSMA2	9631	17925	-1.349	-0.3465	Yes
105	PSMD14	15005	17976	-1.387	-0.3329	Yes
106	LCK	15746	17991	-1.398	-0.3171	Yes
107	PSMB3	11180	18016	-1.424	-0.3016	Yes
108	NUPL2	6072	18061	-1.465	-0.2867	Yes
109	PSMA7	14318	18110	-1.516	-0.2714	Yes
110	RBX1	12130 7123	18213	-1.640	-0.2576	Yes
111	PSMB6	9634	18218	-1.647	-0.2384	Yes
112	PSMD9	3461 7393	18267	-1.723	-0.2207	Yes
113	POLR2H	10888	18321	-1.818	-0.2021	Yes
114	GTF2E2	18635	18339	-1.848	-0.1812	Yes
115	NUP43	20094	18353	-1.873	-0.1599	Yes
116	POLR2G	23753	18407	-1.978	-0.1394	Yes
117	GTF2E1	22597	18481	-2.218	-0.1172	Yes
118	TCEB1	13995	18503	-2.265	-0.0916	Yes
119	PSMB5	9633	18507	-2.296	-0.0647	Yes
120	SUPT4H1	9938	18579	-2.818	-0.0353	Yes
121	PSMD2	10137 5724	18598	-3.160	0.0010	Yes