Details for gene set V$NF1_Q6

Table: GSEA Results Summary

Dataset	Set_04_DMpreB_versus_WTpreB.phenotype_DMpreB_versus_WTpreB.cls #DMpreB_versus_WTpreB
Phenotype	phenotype_DMpreB_versus_WTpreB.cls#DMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	V$NF1_Q6_01
Enrichment Score (ES)	-0.6001914
Normalized Enrichment Score (NES)	-1.5861269
Nominal p-value	0.0
FDR q-value	0.04739025
FWER p-Value	0.35

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NACA	9444 5147	205	6.962	0.0362	No
2	POLR2H	10888	611	4.591	0.0454	No
3	SMAD6	19083	1038	3.214	0.0441	No
4	ANP32A	8592 4387 19415	1107	3.050	0.0612	No
5	HBP1	2048 2162 21086	1975	1.578	0.0249	No
6	CLDN10	21935 2785 2601 2720 7188	2307	1.167	0.0148	No
7	LAMB2	9265	2342	1.125	0.0206	No
8	EXTL3	21785 21786 3088	2505	0.998	0.0186	No
9	TANK	2839 15006 2729	2541	0.980	0.0234	No
10	KRTCAP2	15541	2600	0.920	0.0265	No
11	NDUFS2	4089 13760	2812	0.719	0.0199	No
12	ARCN1	19143	2833	0.701	0.0236	No
13	CACNA2D1	8676	2958	0.591	0.0209	No
14	DNAJB4	12451 1916 1832	3178	0.451	0.0121	No
15	RHOJ	21241	3212	0.436	0.0133	No
16	PTGDS	14658	3326	0.381	0.0097	No
17	ACVR1	4334	3479	0.334	0.0037	No
18	FIGF	24212	3516	0.322	0.0040	No
19	GPR158	149	3693	0.275	-0.0037	No
20	ADAMTSL1	16181	3896	0.231	-0.0131	No
21	YARS	16071	3945	0.223	-0.0142	No
22	ATP8B3	12513 7426 19693	3977	0.217	-0.0144	No
23	COL11A2	23286	3982	0.216	-0.0131	No
24	DUSP14	12124	4042	0.208	-0.0149	No
25	NCALD	22310	4083	0.202	-0.0157	No
26	TRERF1	1546 23213	4124	0.196	-0.0166	No
27	RBP2	19347	4187	0.188	-0.0186	No
28	SFRP2	15564	4360	0.164	-0.0269	No
29	CLCN2	22637	4385	0.162	-0.0271	No
30	SCUBE2	1879 17678	4512	0.149	-0.0329	No
31	DLX3	20697	4533	0.147	-0.0330	No
32	NTNG2	2731 9330	4608	0.140	-0.0360	No
33	TGIF2	6013 6012	4620	0.139	-0.0357	No
34	SOX2	9849 15612	4683	0.134	-0.0381	No
35	JDP2	21201	4693	0.133	-0.0377	No
36	STMN4	21977	5048	0.110	-0.0562	No
37	NOL4	2028 11432	5084	0.108	-0.0573	No
38	CYP1A2	19097	5092	0.107	-0.0570	No
39	ATF4	22417 2239	5109	0.106	-0.0571	No
40	SPINK5	23569	5150	0.105	-0.0586	No
41	PGF	21020	5155	0.104	-0.0581	No
42	HOXA6	17150	5207	0.101	-0.0602	No
43	DDIT4L	15410	5481	0.087	-0.0744	No
44	TREX2	24137	5519	0.085	-0.0758	No
45	MID1	5097 5098	5763	0.074	-0.0885	No
46	NR1H3	10258 2787	5876	0.070	-0.0941	No
47	LOXL1	5002	5877	0.070	-0.0936	No
48	HOXB5	20687	5990	0.067	-0.0992	No
49	KLHL2	13381	6112	0.063	-0.1054	No
50	KIRREL2	17889 3922	6116	0.063	-0.1051	No
51	SULT2A1	5527	6165	0.062	-0.1073	No
52	SALL1	18796 12207	6190	0.061	-0.1082	No
53	BBOX1	5010 9290	6199	0.060	-0.1082	No
54	GCM1	19372	6273	0.058	-0.1118	No
55	CHGA	21178 2151	6339	0.057	-0.1149	No
56	MCAM	3109 19479	6452	0.054	-0.1206	No
57	GJA3	21807	6598	0.051	-0.1281	No
58	APLN	24164	6724	0.048	-0.1346	No
59	ENPP1	19804	6838	0.046	-0.1404	No
60	MAMDC1	21054 6798	6880	0.045	-0.1423	No
61	SEMA4C	9799	6892	0.045	-0.1426	No
62	IRS4	9183 4926	6907	0.044	-0.1431	No
63	POSTN	1801 11927	7047	0.041	-0.1503	No
64	GDPD2	24280	7172	0.039	-0.1568	No
65	WNT16	17512 1152	7261	0.037	-0.1613	No
66	STAT5B	20222	7325	0.036	-0.1645	No
67	FGF11	20383	7450	0.034	-0.1710	No
68	NLGN3	10878	7466	0.033	-0.1715	No
69	GDF8	9411	7555	0.032	-0.1761	No
70	SLC26A7	5538 2372	7638	0.030	-0.1803	No
71	TEK	16175	7666	0.030	-0.1816	No
72	EIF4G2	1908 8892	7830	0.027	-0.1903	No
73	B3GALT2	6498	7968	0.025	-0.1975	No
74	CYP26B1	17093	8191	0.022	-0.2094	No
75	SLC24A4	6223	8245	0.021	-0.2121	No
76	CITED2	5118 14477	8285	0.021	-0.2141	No
77	ASPN	21644	8376	0.019	-0.2189	No
78	ZIC5	12268	8443	0.019	-0.2223	No
79	CACNB1	1443 1304	8932	0.012	-0.2487	No
80	LRRTM1	17408	8945	0.012	-0.2492	No
81	ALK	8574	8962	0.012	-0.2500	No
82	B2M	72 14882	9089	0.011	-0.2568	No
83	CNOT7	3787 9600	9239	0.009	-0.2648	No
84	HIP1	5676	9311	0.008	-0.2686	No
85	TSLP	23604 1955	9354	0.007	-0.2708	No
86	SLC2A12	20073	9543	0.005	-0.2810	No
87	DCT	4603 21723	9579	0.004	-0.2829	No
88	MOV10	9403 9402 5114	9711	0.003	-0.2900	No
89	GPD1	22361	10004	-0.001	-0.3058	No
90	NFIA	16172 5170	10033	-0.002	-0.3073	No
91	GSH1	16622	10075	-0.002	-0.3095	No
92	TLX3	20501	10139	-0.003	-0.3129	No
93	EBF2	21975	10186	-0.003	-0.3154	No
94	LOX	23438	10225	-0.004	-0.3174	No
95	EPHB2	4675 2440 8910	10347	-0.005	-0.3239	No
96	PTHR1	5318 18985	10406	-0.006	-0.3270	No
97	MPP2	20209	10408	-0.006	-0.3271	No
98	BMP6	8659	10582	-0.008	-0.3364	No
99	RARB	3011 21915	10781	-0.011	-0.3470	No
100	KCNH2	16592	10827	-0.012	-0.3494	No
101	PAX3	13910	10987	-0.014	-0.3579	No
102	MTSS1	5585 22285	11237	-0.018	-0.3713	No
103	SP7	22110	11247	-0.018	-0.3717	No
104	LGR6	11623 977	11332	-0.019	-0.3761	No
105	RPE65	15382	11440	-0.020	-0.3818	No
106	CNTNAP4	18462 3857	11666	-0.024	-0.3938	No
107	SLC2A4	20380	12102	-0.032	-0.4172	No
108	CROT	13165	12151	-0.033	-0.4196	No
109	SLC15A2	22600	12152	-0.033	-0.4193	No
110	SPRY1	15606 1901	12336	-0.037	-0.4290	No
111	NOX3	10322	12632	-0.045	-0.4447	No
112	IGSF8	14048	12706	-0.047	-0.4483	No
113	LMNA	4999 15290 1778 9280	12737	-0.047	-0.4496	No
114	RETNLB	12178	12817	-0.049	-0.4536	No
115	SYT8	18006	12820	-0.049	-0.4534	No
116	SV2A	15498 12250	12915	-0.052	-0.4581	No
117	HIPK1	4851	12960	-0.053	-0.4601	No
118	TYR	17763	13007	-0.054	-0.4623	No
119	JPH4	21826	13126	-0.058	-0.4683	No
120	PROP1	20472	13289	-0.064	-0.4766	No
121	MGAT4A	13977	13305	-0.065	-0.4770	No
122	SLITRK6	21724	13367	-0.067	-0.4798	No
123	SYTL2	18190 1539 3730	13377	-0.068	-0.4799	No
124	JPH1	13994	13674	-0.082	-0.4954	No
125	FGF4	8964	13993	-0.101	-0.5119	No
126	PIPOX	20340	14001	-0.102	-0.5116	No
127	RHOQ	23142	14100	-0.110	-0.5162	No
128	MKL1	5864	14199	-0.119	-0.5207	No
129	RNF41	12553 7464	14282	-0.127	-0.5243	No
130	RBM9	2276 13528	14358	-0.136	-0.5274	No
131	ALDOC	20759 311	14449	-0.146	-0.5313	No
132	SMARCA1	24165	14638	-0.172	-0.5403	No
133	MAP4K5	11853 21048 2101 2142	15096	-0.263	-0.5633	No
134	LGALS9	1441 20332 1200	15103	-0.265	-0.5618	No
135	PTMA	9657	15118	-0.268	-0.5608	No
136	HMGN2	9095	15229	-0.297	-0.5647	No
137	TRIM46	1779 15281	15356	-0.337	-0.5693	No
138	XPR1	5383	15417	-0.358	-0.5701	No
139	UBE2D3	7253	15487	-0.387	-0.5712	No
140	COPG2	17193	15727	-0.506	-0.5807	No
141	SESN3	19561	15821	-0.567	-0.5819	No
142	RASGRP2	9693	16026	-0.747	-0.5879	No
143	BCAR3	15432	16234	-0.966	-0.5926	Yes
144	EFNB1	24285	16362	-1.056	-0.5923	Yes
145	RNF25	13922 3929	16509	-1.222	-0.5919	Yes
146	ZNF148	5949	16515	-1.233	-0.5838	Yes
147	EIF4EBP3	8429	16544	-1.267	-0.5767	Yes
148	PPP2CA	20890	16627	-1.403	-0.5716	Yes
149	H1F0	22428	16674	-1.457	-0.5642	Yes
150	BCL9	15232	16684	-1.483	-0.5546	Yes
151	FBXL20	13010	16688	-1.488	-0.5447	Yes
152	ATP6V1A	8638	16784	-1.640	-0.5387	Yes
153	FHOD1	18772	16792	-1.656	-0.5278	Yes
154	RAPGEF5	5739 10155 21123	16794	-1.661	-0.5166	Yes
155	H3F3B	4839	17030	-1.944	-0.5161	Yes
156	TLK2	20628	17231	-2.287	-0.5115	Yes
157	RUNX1	4481	17234	-2.291	-0.4960	Yes
158	H1FX	10835	17374	-2.596	-0.4859	Yes
159	JUP	4937	17591	-3.058	-0.4769	Yes
160	IL2RA	4918	17622	-3.145	-0.4571	Yes
161	SNF1LK	23033	17648	-3.225	-0.4366	Yes
162	DUSP10	4003 14016	17669	-3.295	-0.4153	Yes
163	ZBTB5	15891	17699	-3.357	-0.3940	Yes
164	NFATC3	5169	17772	-3.544	-0.3739	Yes
165	STARD3	20675	17778	-3.553	-0.3500	Yes
166	AXUD1	18967	17830	-3.686	-0.3277	Yes
167	NFKBIA	21065	17838	-3.699	-0.3030	Yes
168	PPM1D	20721	18053	-4.474	-0.2842	Yes
169	MGST1	17254	18083	-4.575	-0.2547	Yes
170	MBNL1	1921 15582	18100	-4.631	-0.2241	Yes
171	RRAS	18256	18165	-4.858	-0.1946	Yes
172	ORMDL3	12386	18280	-5.413	-0.1640	Yes
173	MBNL2	21932	18284	-5.431	-0.1273	Yes
174	STAT3	5525 9906	18455	-6.760	-0.0906	Yes
175	KLF13	17807	18488	-7.203	-0.0434	Yes
176	SOX4	5479	18506	-7.403	0.0060	Yes