Details for gene set V$FREAC2

Table: GSEA Results Summary

Dataset	Set_04_DMpreB_versus_WTpreB.phenotype_DMpreB_versus_WTpreB.cls #DMpreB_versus_WTpreB
Phenotype	phenotype_DMpreB_versus_WTpreB.cls#DMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	V$FREAC2_01
Enrichment Score (ES)	-0.61637294
Normalized Enrichment Score (NES)	-1.6334445
Nominal p-value	0.0
FDR q-value	0.050572433
FWER p-Value	0.189

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MPP6	17448	371	5.712	0.0090	No
2	RBM4	9706 3693	476	5.199	0.0298	No
3	MCM7	9372 3568	497	5.089	0.0546	No
4	CPN1	23667	790	3.964	0.0589	No
5	VPS52	23287 1622	935	3.524	0.0691	No
6	TIAM1	22547	1097	3.076	0.0760	No
7	TPP2	14257	1289	2.666	0.0792	No
8	CHCHD7	16280	1731	1.922	0.0651	No
9	HBP1	2048 2162 21086	1975	1.578	0.0599	No
10	DOCK3	9920 5537 10751	1983	1.574	0.0675	No
11	ATBF1	916 8633	2048	1.498	0.0717	No
12	SIN3A	5442	2148	1.383	0.0734	No
13	STK3	7084	2207	1.307	0.0769	No
14	E2F3	21500 8874	2367	1.098	0.0738	No
15	CLPX	19403	2421	1.049	0.0763	No
16	PROX1	9623	2473	1.006	0.0787	No
17	DNAJB12	7146	2637	0.882	0.0743	No
18	EXT1	22297	2669	0.843	0.0769	No
19	HABP4	12145	2744	0.771	0.0768	No
20	STOML2	15902	2765	0.752	0.0796	No
21	RAD21	22298	2816	0.716	0.0805	No
22	ARID4A	2080 6215	3041	0.533	0.0711	No
23	DTNA	8870 4647 23611 1991	3063	0.521	0.0726	No
24	HOXC4	4864	3152	0.460	0.0701	No
25	HOXC8	4865	3177	0.451	0.0711	No
26	NFIB	15855	3226	0.430	0.0707	No
27	WEE1	18127	3229	0.429	0.0728	No
28	NFIX	9458	3501	0.326	0.0598	No
29	NFRKB	10642	3521	0.321	0.0604	No
30	DHX8	20649	3583	0.306	0.0586	No
31	BCL11B	7190	3746	0.263	0.0512	No
32	ADAM12	2207 8545	3812	0.249	0.0489	No
33	FOXP2	4312 17523 8523	3935	0.225	0.0434	No
34	IL6ST	4920	3953	0.221	0.0436	No
35	GPRC5C	12864	4033	0.209	0.0404	No
36	SMAD1	18831 922	4300	0.173	0.0269	No
37	TBX4	5633	4363	0.164	0.0243	No
38	HOXD9	14982	4547	0.146	0.0152	No
39	POU3F4	347	4618	0.139	0.0121	No
40	NAP1L3	24266	4913	0.117	-0.0033	No
41	CDX2	16289	5116	0.106	-0.0137	No
42	THRA	1447 10171 1406	5121	0.106	-0.0134	No
43	NRAP	23642	5283	0.097	-0.0216	No
44	NRG1	3885	5288	0.097	-0.0213	No
45	PHF15	20467 8050	5571	0.083	-0.0362	No
46	HR	3622 9119	5698	0.077	-0.0427	No
47	MID1	5097 5098	5763	0.074	-0.0458	No
48	BDNF	14926 2797	5766	0.074	-0.0455	No
49	TCF15	14798	5807	0.072	-0.0473	No
50	KCTD15	17864	5849	0.071	-0.0491	No
51	SLITRK5	21939	6241	0.059	-0.0700	No
52	DSG4	9262 23616	6374	0.056	-0.0769	No
53	EN1	387 14155	6404	0.055	-0.0782	No
54	IGF1	3352 9156 3409	6411	0.055	-0.0783	No
55	EN2	16898	6421	0.055	-0.0785	No
56	ROR1	6472	6713	0.049	-0.0940	No
57	AKT2	4365 4366	6728	0.048	-0.0945	No
58	SYT6	13437 7042 12040	6823	0.046	-0.0994	No
59	IRS4	9183 4926	6907	0.044	-0.1037	No
60	NNT	3273 5181 9471 3238	7053	0.041	-0.1113	No
61	KLF12	4960 2637 21732 9228	7086	0.040	-0.1128	No
62	PCSK1	21600	7368	0.035	-0.1279	No
63	PAK1	9527	7590	0.031	-0.1397	No
64	AP1G2	2677 21827	7659	0.030	-0.1433	No
65	HOXC12	22343	7684	0.030	-0.1444	No
66	FOSL2	4733 8978 16878	7715	0.029	-0.1459	No
67	EPHB3	22816	8008	0.025	-0.1616	No
68	CITED2	5118 14477	8285	0.021	-0.1765	No
69	ERG	1686 8915	8403	0.019	-0.1827	No
70	RORA	3019 5388	8471	0.018	-0.1863	No
71	SLC34A3	14664	8517	0.018	-0.1886	No
72	PCDH18	15348	8590	0.017	-0.1924	No
73	BRUNOL6	19421	8706	0.015	-0.1986	No
74	TCF1	16416	8918	0.013	-0.2100	No
75	BMP5	19376	8936	0.012	-0.2108	No
76	CXXC5	12523	8946	0.012	-0.2113	No
77	SYT1	5565	8949	0.012	-0.2113	No
78	SCRN3	14984	9003	0.012	-0.2141	No
79	RARA	5358	9085	0.011	-0.2185	No
80	FGF12	1723 22621	9206	0.009	-0.2249	No
81	SLC38A3	13319	9233	0.009	-0.2263	No
82	EVI1	4689 8926	9266	0.008	-0.2280	No
83	LRP5	23948 9285	9907	0.000	-0.2627	No
84	RBM16	11492 8387	9923	-0.000	-0.2635	No
85	PRDM1	19775 3337	9987	-0.001	-0.2669	No
86	CD2AP	22975	10173	-0.003	-0.2769	No
87	FGF20	18892	10245	-0.004	-0.2808	No
88	STOML3	15594	10304	-0.005	-0.2839	No
89	FBXW7	1805 11928	10321	-0.005	-0.2847	No
90	PURA	9670	10425	-0.006	-0.2903	No
91	CALD1	4273 8463	10526	-0.008	-0.2957	No
92	CLDN8	22549 1747	10573	-0.008	-0.2981	No
93	EYA1	4695 4061	10600	-0.009	-0.2995	No
94	RASGEF1B	11515 16469	10670	-0.010	-0.3032	No
95	PITX2	15424 1878	10992	-0.014	-0.3205	No
96	HEBP2	19812	11112	-0.016	-0.3269	No
97	VIT	23155	11187	-0.017	-0.3308	No
98	GREM1	14485	11304	-0.019	-0.3370	No
99	GNPNAT1	12027 7031	11410	-0.020	-0.3426	No
100	HHIP	4849	11477	-0.021	-0.3461	No
101	MMP13	19573 3007	11511	-0.022	-0.3478	No
102	ENPP2	9548	11567	-0.023	-0.3506	No
103	HOXA11	17146	11692	-0.025	-0.3572	No
104	PLUNC	9593	11833	-0.027	-0.3647	No
105	MITF	17349	11903	-0.028	-0.3683	No
106	PLCB2	5262	11963	-0.029	-0.3713	No
107	ACCN1	20327 1194	12053	-0.031	-0.3760	No
108	SLC2A4	20380	12102	-0.032	-0.3784	No
109	NGEF	13891	12109	-0.032	-0.3786	No
110	DSTN	14823	12168	-0.034	-0.3816	No
111	GPR4	18364	12216	-0.034	-0.3840	No
112	RASD1	20424	12352	-0.038	-0.3911	No
113	BMP2	14833	12361	-0.038	-0.3913	No
114	UBE2H	5823 5822	12376	-0.038	-0.3919	No
115	MRGPRF	17995	12378	-0.038	-0.3918	No
116	TRPC4	15593	12401	-0.039	-0.3927	No
117	SH3GL3	18201	12587	-0.044	-0.4026	No
118	HAND2	18615	12807	-0.049	-0.4142	No
119	HIPK1	4851	12960	-0.053	-0.4222	No
120	FOXB1	12254 19069	13190	-0.061	-0.4343	No
121	PRKCH	21246	13227	-0.062	-0.4359	No
122	OFCC1	21486	13329	-0.066	-0.4411	No
123	POU3F3	14261	13516	-0.073	-0.4508	No
124	PLAG1	7148 15949 12161	13589	-0.078	-0.4543	No
125	MAFF	22423 2243	13615	-0.079	-0.4552	No
126	PAPPA	16190	14030	-0.104	-0.4772	No
127	CD109	6174 10656 19369	14038	-0.105	-0.4770	No
128	PIK3C2A	17667	14052	-0.106	-0.4772	No
129	PELI2	8217	14133	-0.112	-0.4809	No
130	MLLT6	20678	14163	-0.115	-0.4819	No
131	FGF9	8966	14222	-0.121	-0.4845	No
132	NDRG1	22276	14367	-0.137	-0.4916	No
133	AXL	17922	14463	-0.148	-0.4960	No
134	BRIP1	20311	14537	-0.156	-0.4991	No
135	DHRS3	15997	14663	-0.177	-0.5050	No
136	DUSP4	18632 3820	14695	-0.182	-0.5058	No
137	AP4M1	3499 16656	14702	-0.183	-0.5052	No
138	EGLN1	8504 18707 4298	14854	-0.211	-0.5123	No
139	MAP4K5	11853 21048 2101 2142	15096	-0.263	-0.5240	No
140	EZH1	20217	15194	-0.287	-0.5278	No
141	MRVI1	17674 1020 2526	15236	-0.298	-0.5285	No
142	CGA	16246	15780	-0.538	-0.5552	No
143	PITPNC1	7759	15898	-0.634	-0.5583	No
144	RPS18	1529 5397 1603	15907	-0.640	-0.5555	No
145	TGFB3	10161	15913	-0.649	-0.5525	No
146	PCF11	121	15957	-0.683	-0.5513	No
147	CPNE1	11186	16094	-0.816	-0.5546	No
148	MCC	552	16095	-0.817	-0.5504	No
149	ZADH2	23501	16127	-0.854	-0.5477	No
150	ELMO1	3275 8939 3202 3271 3254 3235 3164 3175 3274 3188 3293 3214 3218 3239	16273	-0.995	-0.5505	No
151	BCL9	15232	16684	-1.483	-0.5652	No
152	CDKN1C	17546	17628	-3.172	-0.6002	Yes
153	KBTBD2	17137	17665	-3.280	-0.5855	Yes
154	BCAS3	5314	17668	-3.294	-0.5688	Yes
155	SMAD5	21621	17677	-3.317	-0.5524	Yes
156	SEPP1	22524	17720	-3.429	-0.5372	Yes
157	UHRF2	3731 4262 8452 23887	17733	-3.460	-0.5202	Yes
158	HIBADH	17144	17782	-3.569	-0.5047	Yes
159	HOXB4	20686	17827	-3.678	-0.4883	Yes
160	PDE7A	9544 1788	17861	-3.771	-0.4709	Yes
161	TOB1	20703	17875	-3.812	-0.4522	Yes
162	RAB6IP1	17676	17879	-3.826	-0.4329	Yes
163	ETV5	22630	17951	-4.075	-0.4160	Yes
164	UTX	10266 2574	17994	-4.204	-0.3969	Yes
165	BCL11A	4691	18039	-4.409	-0.3769	Yes
166	PPM1D	20721	18053	-4.474	-0.3548	Yes
167	MBNL1	1921 15582	18100	-4.631	-0.3337	Yes
168	DUSP1	23061	18109	-4.651	-0.3105	Yes
169	PPAP2B	7503 16161	18203	-5.029	-0.2899	Yes
170	CHD2	10847	18237	-5.235	-0.2651	Yes
171	TBCC	23215	18243	-5.273	-0.2385	Yes
172	EMP1	17260	18255	-5.322	-0.2120	Yes
173	CDKN1A	4511 8729	18269	-5.369	-0.1854	Yes
174	MBNL2	21932	18284	-5.431	-0.1585	Yes
175	SQSTM1	9517	18310	-5.605	-0.1313	Yes
176	ABTB1	17075	18369	-5.928	-0.1043	Yes
177	LMO4	15151	18404	-6.210	-0.0745	Yes
178	KLF3	4961	18557	-8.119	-0.0414	Yes
179	MARCKS	9331	18581	-8.761	0.0019	Yes