Details for gene set TTGCACT,MIR-130A,MIR-301,MIR-130B[GSEA]

Table: GSEA Results Summary

Dataset	Set_04_DMpreB_versus_WTpreB.phenotype_DMpreB_versus_WTpreB.cls #DMpreB_versus_WTpreB
Phenotype	phenotype_DMpreB_versus_WTpreB.cls#DMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	TTGCACT,MIR-130A,MIR-301,MIR-130B
Enrichment Score (ES)	-0.5828109
Normalized Enrichment Score (NES)	-1.6111678
Nominal p-value	0.0
FDR q-value	0.054545328
FWER p-Value	0.266

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CNOT4	7010 1022	166	7.395	0.0202	No
2	CCRN4L	15599 8708	765	4.048	0.0036	No
3	SMOC1	21221	846	3.834	0.0143	No
4	SUV39H1	24194	1202	2.857	0.0063	No
5	NIPA1	6124	1259	2.733	0.0140	No
6	TRPS1	8195	1515	2.233	0.0089	No
7	BTG1	4458 4457 8663	1528	2.226	0.0171	No
8	SKP1A	20889	1663	2.034	0.0178	No
9	TARDBP	10520 6066	1689	1.991	0.0243	No
10	FOXF2	21677	1862	1.734	0.0218	No
11	CSF1	15202	1896	1.677	0.0266	No
12	RASSF1	12091 3120	1912	1.659	0.0323	No
13	YTHDF2	5623 5624	1930	1.624	0.0378	No
14	HBP1	2048 2162 21086	1975	1.578	0.0417	No
15	DOCK3	9920 5537 10751	1983	1.574	0.0475	No
16	PRKD3	13252 7956	2023	1.529	0.0514	No
17	SPG20	6024	2082	1.454	0.0540	No
18	STARD13	10833	2103	1.440	0.0586	No
19	LRP4	14947	2159	1.372	0.0610	No
20	DICER1	20989	2278	1.205	0.0593	No
21	RHOT1	12227	2298	1.178	0.0630	No
22	PAFAH1B1	1340 5220 9524	2517	0.994	0.0550	No
23	ZFPM2	22483	2596	0.926	0.0544	No
24	CD69	16979 8717	2653	0.858	0.0548	No
25	MIB1	5908	2705	0.812	0.0552	No
26	HABP4	12145	2744	0.771	0.0562	No
27	SFMBT1	12053 7050	3044	0.531	0.0420	No
28	ACSL4	24043 11936 24042 2614 6940	3094	0.499	0.0413	No
29	ACBD5	15105 2751	3128	0.479	0.0414	No
30	E2F7	19884	3187	0.447	0.0400	No
31	WEE1	18127	3229	0.429	0.0394	No
32	ROBO2	6501	3347	0.371	0.0345	No
33	LDLR	4990	3359	0.366	0.0354	No
34	NPNT	4315	3418	0.349	0.0336	No
35	STX6	14091 12213	3434	0.345	0.0341	No
36	ACVR1	4334	3479	0.334	0.0330	No
37	BRWD1	8222 1659 22532	3480	0.334	0.0344	No
38	B4GALT5	14333	3610	0.300	0.0285	No
39	BIRC6	4455	3803	0.251	0.0191	No
40	ADAM12	2207 8545	3812	0.249	0.0196	No
41	ASXL2	7957	4207	0.184	-0.0011	No
42	RKHD1	10693	4214	0.183	-0.0007	No
43	POU3F2	15931	4274	0.176	-0.0033	No
44	AKAP1	4364 1326 1286 20299	4301	0.173	-0.0040	No
45	CLTC	14610	4335	0.168	-0.0051	No
46	ENPP5	23230	4428	0.158	-0.0095	No
47	HRB	14208 4066	4555	0.145	-0.0158	No
48	NRBF2	24095	4632	0.138	-0.0194	No
49	LRCH2	24035	4743	0.129	-0.0249	No
50	MEOX2	21285	4757	0.128	-0.0251	No
51	LRIG1	9179	4851	0.121	-0.0297	No
52	SLC24A3	14818	4871	0.120	-0.0302	No
53	HOXB3	20685	4909	0.118	-0.0318	No
54	MAP3K9	6872	5030	0.111	-0.0379	No
55	M6PR	1053 5044 9328	5053	0.109	-0.0387	No
56	RAB5A	11310	5443	0.088	-0.0595	No
57	TGFBR2	2994 3001 10167	5527	0.085	-0.0637	No
58	MTF1	5128 9421	5530	0.085	-0.0635	No
59	MYT1	36	5590	0.082	-0.0664	No
60	CSNK1G1	3057 5671 19397	5778	0.074	-0.0762	No
61	SH3D19	6551	5783	0.074	-0.0762	No
62	EXOC5	8370	5898	0.070	-0.0821	No
63	NME7	926 4101 14070 3986 3946 931	5919	0.069	-0.0829	No
64	ZBTB4	13267	6030	0.066	-0.0887	No
65	WDFY3	7789 3607 16462	6043	0.065	-0.0891	No
66	CREB5	10551	6052	0.065	-0.0892	No
67	STC1	21974	6065	0.064	-0.0896	No
68	RAI2	10762	6117	0.063	-0.0922	No
69	NR3C2	18562 13798	6127	0.063	-0.0924	No
70	R3HDM1	4002 974	6159	0.062	-0.0939	No
71	KIT	16823	6209	0.060	-0.0963	No
72	SCRT1	9303	6257	0.059	-0.0986	No
73	TBC1D8	12044	6259	0.059	-0.0984	No
74	PPARG	1151 1144 17319	6390	0.056	-0.1053	No
75	BHLHB3	16935	6401	0.055	-0.1056	No
76	PTPRG	22097 3151	6442	0.054	-0.1076	No
77	MAPRE3	8301	6446	0.054	-0.1075	No
78	RUNX3	8702	6490	0.053	-0.1097	No
79	LRP8	16149 2425	6500	0.053	-0.1099	No
80	ATP11A	18683 6934	6641	0.050	-0.1174	No
81	SLC9A2	10392 5964	6675	0.049	-0.1190	No
82	PLCB1	14832 2821	6766	0.047	-0.1237	No
83	FMR1	24321	6848	0.046	-0.1279	No
84	MAMDC1	21054 6798	6880	0.045	-0.1294	No
85	ZFYVE9	10501 2449	6887	0.045	-0.1296	No
86	DPYSL2	3122 4561 8787	6945	0.043	-0.1325	No
87	USP33	5036	7084	0.040	-0.1399	No
88	GAP43	9001	7090	0.040	-0.1400	No
89	PAPD4	8299 8300 4146	7109	0.040	-0.1408	No
90	AKAP7	6478	7110	0.040	-0.1407	No
91	ADAMTS18	5540	7153	0.039	-0.1428	No
92	SMOC2	23378	7165	0.039	-0.1432	No
93	UCP3	3972 18175	7304	0.036	-0.1506	No
94	PTPRM	22904	7316	0.036	-0.1511	No
95	TMEPAI	51	7394	0.035	-0.1551	No
96	FASTK	16589 3661 3478 3664	7601	0.031	-0.1662	No
97	QKI	23128 5340	7623	0.031	-0.1673	No
98	ARID4B	21705 3233	7630	0.031	-0.1675	No
99	HIVEP2	9091	7812	0.028	-0.1772	No
100	SASH1	19826	7854	0.027	-0.1793	No
101	ERBB4	13933 4678	7859	0.027	-0.1794	No
102	WDR20	21258	7869	0.027	-0.1798	No
103	FBXO28	7508 12612	7930	0.026	-0.1830	No
104	ZCCHC14	4731	7948	0.026	-0.1838	No
105	ATRX	10350 5922 2628	8144	0.023	-0.1944	No
106	PDGFRA	16824	8178	0.022	-0.1961	No
107	ABHD3	23491	8322	0.020	-0.2038	No
108	CANX	4474	8380	0.019	-0.2068	No
109	TESK2	10504	8419	0.019	-0.2088	No
110	FSTL5	10018	8526	0.017	-0.2145	No
111	POU4F1	21727	8564	0.017	-0.2165	No
112	RAPGEF4	12141	8628	0.016	-0.2198	No
113	TAF4	14319	8745	0.015	-0.2261	No
114	SOX21	27 10278 2778	8886	0.013	-0.2337	No
115	EMX2	23806	8920	0.013	-0.2354	No
116	HOXA3	9108 1075	9000	0.012	-0.2397	No
117	PGM2L1	7712	9171	0.009	-0.2489	No
118	CNOT7	3787 9600	9239	0.009	-0.2525	No
119	BTBD7	20998	9313	0.008	-0.2565	No
120	PLAA	15836 9584	9404	0.006	-0.2613	No
121	DCBLD2	7855	9469	0.005	-0.2648	No
122	WNK3	24227	9540	0.005	-0.2686	No
123	MAFB	14367	9588	0.004	-0.2711	No
124	ARHGAP12	13257	9627	0.004	-0.2732	No
125	ESR1	20097 4685	9667	0.003	-0.2753	No
126	SOCS6	12042 7044	9738	0.002	-0.2791	No
127	GDA	4764	9794	0.001	-0.2821	No
128	CSMD1	8240	9847	0.001	-0.2849	No
129	ARHGEF12	19156	9942	-0.000	-0.2900	No
130	TSC1	7235	9972	-0.001	-0.2916	No
131	NPTX1	20126	10028	-0.001	-0.2946	No
132	NPAT	19452 6356	10031	-0.002	-0.2947	No
133	NEUROD1	14550	10083	-0.002	-0.2975	No
134	PHACTR2	19817	10267	-0.004	-0.3074	No
135	PTGFRN	15224	10313	-0.005	-0.3099	No
136	CLCN5	24204	10372	-0.005	-0.3130	No
137	EREG	4679 16797	10638	-0.009	-0.3274	No
138	RXRA	9767	10756	-0.011	-0.3337	No
139	ATXN1	21477	10971	-0.014	-0.3454	No
140	EDG1	15187	11103	-0.015	-0.3524	No
141	COL19A1	4541	11233	-0.017	-0.3594	No
142	EIF2C1	10672	11324	-0.019	-0.3642	No
143	ST8SIA3	23535	11347	-0.019	-0.3653	No
144	ADCY2	21412	11356	-0.019	-0.3657	No
145	RAB34	20763	11394	-0.020	-0.3676	No
146	ROBO1	9731	11405	-0.020	-0.3681	No
147	ABCC5	22639 351	11414	-0.020	-0.3685	No
148	WNT1	22371	11429	-0.020	-0.3691	No
149	MAP3K12	6454 11164	11465	-0.021	-0.3710	No
150	TRIM2	13485 8157	11468	-0.021	-0.3710	No
151	MYB	3344 3355 19806	11688	-0.025	-0.3828	No
152	RTN1	4177 2099	11695	-0.025	-0.3831	No
153	SOX5	9850 1044 5480 16937	11803	-0.027	-0.3888	No
154	ST18	14298	11819	-0.027	-0.3895	No
155	UBE2D1	19738	12101	-0.032	-0.4047	No
156	ATRN	4432 2964	12182	-0.034	-0.4089	No
157	ATP2B2	17038	12228	-0.035	-0.4112	No
158	INHBB	13858	12235	-0.035	-0.4114	No
159	NHLH2	9462	12308	-0.037	-0.4152	No
160	NRP2	5194 9486 5195	12343	-0.038	-0.4169	No
161	RASD1	20424	12352	-0.038	-0.4172	No
162	PRKAA1	22520	12365	-0.038	-0.4177	No
163	ABCA1	15881	12409	-0.039	-0.4199	No
164	SHANK2	17998	12513	-0.042	-0.4253	No
165	SNPH	14395	12522	-0.042	-0.4256	No
166	RUNX2	4480 8700	12564	-0.043	-0.4276	No
167	SULF1	6285	12809	-0.049	-0.4407	No
168	GRM7	17338	12929	-0.052	-0.4470	No
169	PTP4A1	9658	12943	-0.053	-0.4475	No
170	BTBD3	10457 2975 6007 6006	13116	-0.058	-0.4567	No
171	SLMAP	8198 13521 2609	13262	-0.063	-0.4643	No
172	SPHK2	1217 1806 12155	13302	-0.065	-0.4662	No
173	MLLT10	9393 5104	13700	-0.083	-0.4875	No
174	MAT2B	20494 1431	14039	-0.105	-0.5055	No
175	TRIM3	17703	14047	-0.105	-0.5054	No
176	BMPR2	14241 4081	14078	-0.109	-0.5066	No
177	MLLT6	20678	14163	-0.115	-0.5108	No
178	CHST1	13375	14370	-0.138	-0.5214	No
179	NEUROG1	21446	14383	-0.139	-0.5216	No
180	SOCS5	1619 23141	14532	-0.155	-0.5290	No
181	WNT2B	15214 1838	14546	-0.157	-0.5291	No
182	EDA	24284	14588	-0.164	-0.5307	No
183	ERBB2IP	3232 12234	14739	-0.190	-0.5381	No
184	CHD9	6784 11553 18531	14835	-0.206	-0.5425	No
185	CLOCK	8749 16507 4530	14905	-0.220	-0.5453	No
186	SPATA2	6451 6450	14954	-0.228	-0.5471	No
187	USP48	16022	15122	-0.269	-0.5551	No
188	SNAP25	5466	15131	-0.271	-0.5545	No
189	ACSL1	8948	15261	-0.307	-0.5603	No
190	DLL1	23119	15281	-0.313	-0.5601	No
191	EFNB2	18938	15316	-0.325	-0.5606	No
192	ZNF3	7094 3516 12097	15333	-0.329	-0.5602	No
193	EIF2C4	8043 13362	15392	-0.348	-0.5620	No
194	ELK3	4663 94 3388	15398	-0.349	-0.5609	No
195	AP1G1	4392	15515	-0.404	-0.5656	No
196	LNPEP	6267 10760 10761	15568	-0.429	-0.5668	No
197	SNX5	12783 14410	15667	-0.474	-0.5702	No
198	RNF38	7862 2328 13115	15736	-0.511	-0.5719	No
199	HOXA5	17149	15790	-0.543	-0.5727	No
200	IRF1	1336 1258 1433 9182	15819	-0.564	-0.5720	No
201	TMEM32	24149	15992	-0.709	-0.5785	No
202	SPEN	12112	16004	-0.725	-0.5763	No
203	SNX2	1974 23554 12585	16041	-0.761	-0.5752	No
204	SNIP1	16085	16044	-0.762	-0.5723	No
205	BZRAP1	9882	16080	-0.799	-0.5711	No
206	BLCAP	14371	16244	-0.973	-0.5761	No
207	CALM2	8681	16368	-1.071	-0.5786	Yes
208	CYLD	18532	16380	-1.083	-0.5749	Yes
209	PIGA	2592 24210	16386	-1.088	-0.5709	Yes
210	TIMP2	10178	16401	-1.102	-0.5673	Yes
211	ARHGAP21	12929	16405	-1.103	-0.5631	Yes
212	ARHGAP1	6001 10448	16417	-1.121	-0.5593	Yes
213	ATG16L1	14197	16500	-1.209	-0.5590	Yes
214	PITPNM2	16371	16580	-1.322	-0.5580	Yes
215	RALBP1	9725	16607	-1.369	-0.5541	Yes
216	HECA	471	16650	-1.433	-0.5507	Yes
217	TPP1	17701	16657	-1.441	-0.5453	Yes
218	PHF12	11192 6483	16786	-1.647	-0.5458	Yes
219	MID1IP1	24381	16810	-1.682	-0.5404	Yes
220	CNIH	4536 23971	16844	-1.717	-0.5354	Yes
221	BAZ2A	4371	16873	-1.734	-0.5301	Yes
222	ITPK1	10150	16939	-1.819	-0.5265	Yes
223	EPS15	4677	16994	-1.897	-0.5219	Yes
224	ABCB7	24085	17021	-1.931	-0.5157	Yes
225	ARFIP1	8289	17112	-2.094	-0.5123	Yes
226	NDEL1	20399	17216	-2.267	-0.5090	Yes
227	VPS24	17417	17240	-2.306	-0.5012	Yes
228	MECP2	5088	17315	-2.463	-0.4955	Yes
229	SMARCD2	13515	17353	-2.561	-0.4874	Yes
230	PFKFB3	2748	17387	-2.628	-0.4788	Yes
231	CUL3	6470	17394	-2.639	-0.4687	Yes
232	UBE2D2	12148 7139	17430	-2.699	-0.4599	Yes
233	ITPR1	17341	17446	-2.732	-0.4500	Yes
234	OGT	4241 24274	17455	-2.754	-0.4395	Yes
235	RAB5B	359 19591 3430	17508	-2.881	-0.4310	Yes
236	BACH2	8648	17617	-3.129	-0.4245	Yes
237	SNF1LK	23033	17648	-3.225	-0.4134	Yes
238	SMAD5	21621	17677	-3.317	-0.4019	Yes
239	NCOA1	5154	17701	-3.359	-0.3898	Yes
240	DDX6	3086 8844	17702	-3.361	-0.3766	Yes
241	RAP2C	24156	17749	-3.489	-0.3653	Yes
242	ATP6V1B2	18599	17795	-3.608	-0.3535	Yes
243	TTYH3	16312	17825	-3.677	-0.3406	Yes
244	MAP3K14	11998	17837	-3.699	-0.3266	Yes
245	ZFYVE26	9999	17864	-3.776	-0.3131	Yes
246	WDR1	16544 3592	17946	-4.059	-0.3015	Yes
247	EPC2	15015	17995	-4.211	-0.2874	Yes
248	MTMR12	11210	18017	-4.277	-0.2717	Yes
249	ARRDC3	4191	18030	-4.350	-0.2552	Yes
250	MBNL1	1921 15582	18100	-4.631	-0.2407	Yes
251	ULK2	6617 11384	18108	-4.648	-0.2227	Yes
252	PELI1	1303 12493	18177	-4.903	-0.2070	Yes
253	PSAP	20014	18178	-4.914	-0.1876	Yes
254	GJA1	20023	18271	-5.370	-0.1714	Yes
255	GADD45A	17129	18299	-5.514	-0.1511	Yes
256	VGLL4	10558	18314	-5.627	-0.1297	Yes
257	MAML1	20477	18412	-6.286	-0.1101	Yes
258	DNM2	4635 3103	18471	-6.991	-0.0857	Yes
259	KLF13	17807	18488	-7.203	-0.0581	Yes
260	SOX4	5479	18506	-7.403	-0.0298	Yes
261	TNRC6A	10606 12510 2444	18591	-9.057	0.0014	Yes