Details for gene set NETPATH

Table: GSEA Results Summary

Dataset	Set_04_DMpreB_versus_WTpreB.phenotype_DMpreB_versus_WTpreB.cls #DMpreB_versus_WTpreB
Phenotype	phenotype_DMpreB_versus_WTpreB.cls#DMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	NETPATH_TCR
Enrichment Score (ES)	-0.6946163
Normalized Enrichment Score (NES)	-1.7291919
Nominal p-value	0.0
FDR q-value	0.008956725
FWER p-Value	0.059

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PTK2	22271	13	10.897	0.0665	No
2	NCL	5153 13899	818	3.882	0.0470	No
3	CEBPB	8733	1073	3.127	0.0526	No
4	YWHAQ	10369	1863	1.733	0.0206	No
5	TUBA4A	10232	2723	0.792	-0.0209	No
6	VASP	5847	2944	0.606	-0.0290	No
7	DLG1	22793 1672	3069	0.517	-0.0325	No
8	VAV3	1774 1848 15443	3695	0.275	-0.0646	No
9	STK39	14570	3741	0.263	-0.0654	No
10	CD3D	19473	3849	0.241	-0.0697	No
11	PIK3R2	18850	3888	0.232	-0.0703	No
12	SHC1	9813 9812 5430	3936	0.225	-0.0715	No
13	AKT1	8568	4218	0.183	-0.0855	No
14	DUSP3	1358 13022	4390	0.161	-0.0938	No
15	FYN	3375 3395 20052	5072	0.109	-0.1299	No
16	ITK	4934	5197	0.102	-0.1360	No
17	CD5	23741	5231	0.100	-0.1371	No
18	CD4	16999	5252	0.099	-0.1376	No
19	TXK	16513	5591	0.082	-0.1554	No
20	SRC	5507	5727	0.076	-0.1622	No
21	RAP1A	8467	6027	0.066	-0.1779	No
22	GRAP2	5113 9398	6102	0.063	-0.1815	No
23	STAT5B	20222	7325	0.036	-0.2473	No
24	SHB	10493	7714	0.029	-0.2681	No
25	NCK1	9447 5152	7819	0.028	-0.2736	No
26	CD3E	8714	8077	0.024	-0.2873	No
27	PTPN3	9661	8116	0.023	-0.2892	No
28	CD247	4498 8715	9036	0.011	-0.3388	No
29	ACP1	4317	9230	0.009	-0.3491	No
30	PTPN11	5326 16391 9660	9360	0.007	-0.3561	No
31	CD2AP	22975	10173	-0.003	-0.3999	No
32	CDC42	4503 8722 4504 2465	10407	-0.006	-0.4125	No
33	LYN	16281	10463	-0.007	-0.4154	No
34	SKAP2	17153	10553	-0.008	-0.4201	No
35	FYB	10717	10678	-0.010	-0.4268	No
36	INSL3	9181	10755	-0.011	-0.4308	No
37	PAG1	15376	11377	-0.020	-0.4643	No
38	CD3G	19139	11522	-0.022	-0.4719	No
39	TUBB2A	21493	11571	-0.023	-0.4743	No
40	NFATC2	5168 2866	11816	-0.027	-0.4874	No
41	ARHGEF7	3823	12085	-0.032	-0.5016	No
42	PIK3R1	3170	12502	-0.041	-0.5239	No
43	RIPK2	2528 15935	12517	-0.042	-0.5244	No
44	GAB2	1821 18184 2025	12548	-0.043	-0.5257	No
45	PLCG1	14753	12675	-0.046	-0.5322	No
46	PTPRH	11861	12914	-0.052	-0.5448	No
47	SOS1	5476	13046	-0.056	-0.5515	No
48	ABL1	2693 4301 2794	14050	-0.106	-0.6050	No
49	CRK	4559 1249	14137	-0.112	-0.6090	No
50	PTPN12	16597 3502 3586 3665	14167	-0.115	-0.6098	No
51	LAT	17643	14176	-0.117	-0.6096	No
52	CREB1	3990 8782 4558 4093	14365	-0.137	-0.6189	No
53	LCP2	4988 9268	14508	-0.152	-0.6256	No
54	ZAP70	14271 4042	14538	-0.156	-0.6262	No
55	ARHGEF6	13297 13104	14561	-0.159	-0.6264	No
56	CBL	19154	14602	-0.166	-0.6276	No
57	FOS	21202	14800	-0.201	-0.6370	No
58	PRKCQ	2873 2831	14829	-0.205	-0.6372	No
59	UNC119	20758	14959	-0.230	-0.6428	No
60	ENAH	4665 8901	15045	-0.247	-0.6458	No
61	STAT5A	20664	15113	-0.268	-0.6478	No
62	RAPGEF1	4218 2860	15230	-0.297	-0.6522	No
63	PTPN22	1775 15470	15251	-0.303	-0.6514	No
64	MAP2K1	19082	15318	-0.325	-0.6530	No
65	LCK	15746	15440	-0.368	-0.6573	No
66	PTPRC	5327 9662	15564	-0.428	-0.6613	No
67	KHDRBS1	5405 9778	15864	-0.607	-0.6737	No
68	SH2D3C	2864	15995	-0.713	-0.6763	No
69	DEF6	23319	16335	-1.029	-0.6883	Yes
70	JAK3	9198 4936	16361	-1.051	-0.6831	Yes
71	PTPRJ	9664	16387	-1.089	-0.6778	Yes
72	DOCK2	8243	16397	-1.094	-0.6715	Yes
73	ARHGDIB	16950	16594	-1.343	-0.6738	Yes
74	MAP4K1	18313	16775	-1.624	-0.6735	Yes
75	GRAP	20851	16790	-1.654	-0.6641	Yes
76	RASA1	10174	16815	-1.689	-0.6550	Yes
77	HOMER3	18590	16906	-1.781	-0.6488	Yes
78	EVL	21156	16940	-1.821	-0.6394	Yes
79	SH2D2A	6569	17060	-1.993	-0.6335	Yes
80	DTX1	16396	17100	-2.068	-0.6229	Yes
81	SLA	5449	17149	-2.154	-0.6122	Yes
82	CISH	8743	17238	-2.298	-0.6028	Yes
83	SOS2	21049	17328	-2.499	-0.5922	Yes
84	DBNL	20954	17397	-2.642	-0.5796	Yes
85	CARD11	8436	17478	-2.819	-0.5665	Yes
86	SH3BP2	16874	17547	-2.956	-0.5519	Yes
87	CRKL	4560	17588	-3.053	-0.5353	Yes
88	GRB2	20149	17590	-3.055	-0.5165	Yes
89	PSTPIP1	19437	17655	-3.243	-0.4999	Yes
90	JUN	15832	17687	-3.335	-0.4810	Yes
91	GIT2	11174 6462	17770	-3.542	-0.4636	Yes
92	CREBBP	22682 8783	17993	-4.203	-0.4497	Yes
93	SYK	21636	18074	-4.548	-0.4260	Yes
94	BCL10	15397	18081	-4.569	-0.3981	Yes
95	WIPF1	14560	18090	-4.598	-0.3702	Yes
96	ABI1	4300	18105	-4.642	-0.3423	Yes
97	VAV1	23173	18136	-4.751	-0.3146	Yes
98	WAS	24193	18166	-4.862	-0.2862	Yes
99	CBLB	5531 22734	18225	-5.154	-0.2576	Yes
100	PTK2B	21776	18298	-5.513	-0.2275	Yes
101	DNM2	4635 3103	18471	-6.991	-0.1936	Yes
102	WASF2	6326	18486	-7.185	-0.1501	Yes
103	NEDD9	3206 21483	18558	-8.130	-0.1038	Yes
104	PTPN6	17002	18561	-8.216	-0.0532	Yes
105	MAPK1	1642 11167	18592	-9.104	0.0013	Yes