Details for gene set NETPATH

Table: GSEA Results Summary

Dataset	Set_04_DMpreB_versus_WTpreB.phenotype_DMpreB_versus_WTpreB.cls #DMpreB_versus_WTpreB
Phenotype	phenotype_DMpreB_versus_WTpreB.cls#DMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	NETPATH_BCR
Enrichment Score (ES)	-0.6711106
Normalized Enrichment Score (NES)	-1.7111392
Nominal p-value	0.0
FDR q-value	0.011120569
FWER p-Value	0.086

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PTK2	22271	13	10.897	0.0410	No
2	DOK3	3229 21451	207	6.945	0.0571	No
3	CCNE1	17857	261	6.545	0.0792	No
4	BAX	17832	644	4.463	0.0757	No
5	CYCS	8821	744	4.120	0.0861	No
6	MAP3K7	16255	1398	2.420	0.0600	No
7	MAPK8	6459	1644	2.061	0.0547	No
8	RPS6	9757	1729	1.922	0.0575	No
9	BLNK	23681 3691	1758	1.877	0.0631	No
10	CDK2	3438 3373 19592 3322	1846	1.753	0.0651	No
11	CHUK	23665	2157	1.372	0.0536	No
12	BCAR1	18741	2225	1.277	0.0549	No
13	CCNA2	15357	2301	1.176	0.0553	No
14	PPP3CA	1863 5284	2520	0.993	0.0473	No
15	IKBKB	4907	2775	0.746	0.0365	No
16	BCL2L11	2790 14861	3193	0.445	0.0156	No
17	CDK4	3424 19859	3277	0.401	0.0127	No
18	CDK6	16600	3557	0.311	-0.0012	No
19	PIK3R2	18850	3888	0.232	-0.0182	No
20	SHC1	9813 9812 5430	3936	0.225	-0.0198	No
21	AKT1	8568	4218	0.183	-0.0343	No
22	BCL2	8651 3928 13864 4435 981 4062 13863 4027	4380	0.162	-0.0424	No
23	FYN	3375 3395 20052	5072	0.109	-0.0793	No
24	ITK	4934	5197	0.102	-0.0857	No
25	CD5	23741	5231	0.100	-0.0871	No
26	ACTR3	13166	7078	0.041	-0.1867	No
27	MAPK4	23409	7547	0.032	-0.2119	No
28	NCK1	9447 5152	7819	0.028	-0.2264	No
29	PRKCE	9575	7915	0.026	-0.2314	No
30	PTPN11	5326 16391 9660	9360	0.007	-0.3095	No
31	ACTR2	20523	9444	0.006	-0.3139	No
32	CDK7	21365	9956	-0.001	-0.3415	No
33	LYN	16281	10463	-0.007	-0.3689	No
34	CR2	3942 13707	10585	-0.008	-0.3754	No
35	RPS6KA1	15725	10766	-0.011	-0.3850	No
36	PPP3R1	9611 489	11661	-0.024	-0.4333	No
37	NFATC2	5168 2866	11816	-0.027	-0.4415	No
38	IKBKG	2570 2562 4908	11885	-0.028	-0.4451	No
39	DOK1	17104 1018 1177	12045	-0.031	-0.4535	No
40	DAPP1	11159 6445 6446	12268	-0.036	-0.4654	No
41	PIK3R1	3170	12502	-0.041	-0.4778	No
42	GAB2	1821 18184 2025	12548	-0.043	-0.4801	No
43	PLCG1	14753	12675	-0.046	-0.4867	No
44	SOS1	5476	13046	-0.056	-0.5065	No
45	ATF2	4418 2759	13664	-0.081	-0.5396	No
46	PRKD1	2074 21075	13724	-0.084	-0.5424	No
47	CRK	4559 1249	14137	-0.112	-0.5643	No
48	PIP5K1C	5250 19929	14327	-0.132	-0.5740	No
49	CREB1	3990 8782 4558 4093	14365	-0.137	-0.5755	No
50	LCP2	4988 9268	14508	-0.152	-0.5825	No
51	ZAP70	14271 4042	14538	-0.156	-0.5835	No
52	CBL	19154	14602	-0.166	-0.5863	No
53	PRKCQ	2873 2831	14829	-0.205	-0.5977	No
54	GSK3A	405	14926	-0.223	-0.6021	No
55	VAV2	5848 2670	14978	-0.236	-0.6039	No
56	PDK2	20285	15084	-0.259	-0.6086	No
57	RAPGEF1	4218 2860	15230	-0.297	-0.6153	No
58	LCK	15746	15440	-0.368	-0.6252	No
59	CASP9	16001 2410 2458	15533	-0.412	-0.6286	No
60	PTPRC	5327 9662	15564	-0.428	-0.6286	No
61	RPS6KB1	7815 1207 13040	15722	-0.503	-0.6351	No
62	ITPR2	9194	15731	-0.509	-0.6336	No
63	HCK	14787	15979	-0.695	-0.6443	No
64	REL	9716	16182	-0.909	-0.6517	No
65	CASP7	23826	16324	-1.018	-0.6555	No
66	HDAC5	1480 20205	16350	-1.042	-0.6528	No
67	RASGRP3	10767	16689	-1.489	-0.6654	Yes
68	MAP4K1	18313	16775	-1.624	-0.6638	Yes
69	RASA1	10174	16815	-1.689	-0.6595	Yes
70	GTF2I	16353 5491 9863 3280 3184	16882	-1.744	-0.6564	Yes
71	MAPK3	6458 11170	16931	-1.809	-0.6520	Yes
72	CCND2	16987	17025	-1.937	-0.6496	Yes
73	PIK3AP1	23679	17040	-1.963	-0.6429	Yes
74	TEC	16514	17287	-2.394	-0.6470	Yes
75	PRKCD	21897	17290	-2.395	-0.6380	Yes
76	SOS2	21049	17328	-2.499	-0.6304	Yes
77	MAPK14	23313	17421	-2.682	-0.6252	Yes
78	NFATC1	23398 1999 5167 9455 1985 1957	17449	-2.738	-0.6161	Yes
79	CARD11	8436	17478	-2.819	-0.6069	Yes
80	CD79B	20185 1309	17530	-2.928	-0.5984	Yes
81	SH3BP2	16874	17547	-2.956	-0.5880	Yes
82	RB1	21754	17554	-2.982	-0.5769	Yes
83	CRKL	4560	17588	-3.053	-0.5670	Yes
84	GRB2	20149	17590	-3.055	-0.5554	Yes
85	GSK3B	22761	17596	-3.078	-0.5439	Yes
86	CD19	17640	17676	-3.314	-0.5355	Yes
87	JUN	15832	17687	-3.335	-0.5233	Yes
88	CD22	17881	17755	-3.507	-0.5135	Yes
89	NFATC3	5169	17772	-3.544	-0.5008	Yes
90	CD79A	18342	17804	-3.629	-0.4886	Yes
91	NFKBIA	21065	17838	-3.699	-0.4763	Yes
92	BTK	24061	17851	-3.733	-0.4627	Yes
93	CD81	8719	17871	-3.794	-0.4492	Yes
94	PTPN18	14279	17896	-3.874	-0.4357	Yes
95	CCND3	4489 4490	17924	-3.962	-0.4220	Yes
96	RELA	23783	17959	-4.092	-0.4082	Yes
97	SYK	21636	18074	-4.548	-0.3969	Yes
98	BCL10	15397	18081	-4.569	-0.3798	Yes
99	HCLS1	22770	18104	-4.641	-0.3632	Yes
100	LAT2	16351	18112	-4.661	-0.3458	Yes
101	FCGR2B	8959	18125	-4.712	-0.3284	Yes
102	VAV1	23173	18136	-4.751	-0.3108	Yes
103	WAS	24193	18166	-4.862	-0.2938	Yes
104	CBLB	5531 22734	18225	-5.154	-0.2772	Yes
105	GAB1	18828	18283	-5.430	-0.2595	Yes
106	PTK2B	21776	18298	-5.513	-0.2392	Yes
107	PDPK1	23097	18324	-5.661	-0.2189	Yes
108	CSK	8805	18359	-5.871	-0.1983	Yes
109	BLK	3205 21791	18378	-5.983	-0.1764	Yes
110	MAPKAPK2	13838	18416	-6.306	-0.1543	Yes
111	NEDD9	3206 21483	18558	-8.130	-0.1308	Yes
112	PTPN6	17002	18561	-8.216	-0.0995	Yes
113	BCL6	22624	18580	-8.747	-0.0671	Yes
114	CD72	8718	18585	-8.914	-0.0332	Yes
115	MAPK1	1642 11167	18592	-9.104	0.0013	Yes