Details for gene set V$SRF_Q5

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	V$SRF_Q5_01
Enrichment Score (ES)	-0.4572772
Normalized Enrichment Score (NES)	-1.3287858
Nominal p-value	0.02425107
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	H3F3A	2900086	702	1.745	-0.0191	No
2	RBBP7	430113 450450 2370309	748	1.701	-0.0032	No
3	HOXB4	540131	766	1.681	0.0141	No
4	ATF4	730441 1740195	852	1.594	0.0268	No
5	KCNH2	1170451	1144	1.287	0.0250	No
6	MAPK14	5290731	1301	1.150	0.0290	No
7	TPM3	670600 3170296 5670167 6650471	1548	0.998	0.0265	No
8	CFL1	2340735	1650	0.941	0.0312	No
9	EML4	5700373	1651	0.941	0.0414	No
10	LDB1	5270601	1782	0.855	0.0436	No
11	SCOC	610048 2230053	1945	0.761	0.0431	No
12	MBNL1	2640762 7100048	2031	0.700	0.0461	No
13	DGKG	1770025	2154	0.643	0.0464	No
14	SLC25A4	2360519	2158	0.642	0.0532	No
15	ERBB2IP	580253 1090672	2205	0.621	0.0575	No
16	FOXP1	6510433	2240	0.605	0.0622	No
17	CSDA	2470092 3060053 4780056	2332	0.572	0.0634	No
18	SVIL	2450347 4050735 4070576 4120706 5390161 5860142 6520278 7100397	2335	0.569	0.0695	No
19	KRTCAP2	5220040	2372	0.553	0.0735	No
20	PPP1R12A	4070066 4590162	2404	0.543	0.0777	No
21	SLC16A6	1690156	2471	0.516	0.0798	No
22	CHD2	4070039	2546	0.490	0.0811	No
23	LCP1	4280397	2587	0.475	0.0840	No
24	TIMP3	1450504 1980270	2689	0.443	0.0834	No
25	VCL	4120487	2812	0.405	0.0811	No
26	PHF12	870400 3130687	3125	0.306	0.0675	No
27	CORO1C	4570397	3248	0.278	0.0639	No
28	GADD45G	2510142	3423	0.240	0.0571	No
29	PICALM	1940280	3429	0.238	0.0594	No
30	MYL7	2480541	3597	0.205	0.0526	No
31	ASXL2	130670	3601	0.204	0.0546	No
32	MAP2K6	1230056 2940204	4023	0.145	0.0334	No
33	CDKN1B	3800025 6450044	4044	0.142	0.0338	No
34	TRIM3	5570156	4162	0.130	0.0289	No
35	MID1	4070114 4760458	4239	0.124	0.0261	No
36	RERE	3940279	4324	0.117	0.0228	No
37	FGF17	3130022	4451	0.106	0.0172	No
38	OTX1	2510215	4838	0.081	-0.0029	No
39	EFHD1	4070358	5167	0.065	-0.0200	No
40	EGR2	3800403	5178	0.065	-0.0198	No
41	TNMD	3060520	5313	0.060	-0.0264	No
42	SDPR	3360292	5440	0.055	-0.0327	No
43	GPR20	6620601	5498	0.052	-0.0352	No
44	TRIM46	3520609 4590010	5532	0.051	-0.0364	No
45	FOSB	1940142	5598	0.049	-0.0394	No
46	NR2F2	3170609 3310577	5628	0.048	-0.0405	No
47	STARD13	540722	5779	0.043	-0.0481	No
48	THBS1	4560494 430288	5939	0.039	-0.0563	No
49	ITGB6	2810068 4570332	5945	0.038	-0.0562	No
50	ACTR3	1400497	5984	0.037	-0.0579	No
51	PRKAB2	6980300	5987	0.037	-0.0576	No
52	RARB	430139 1410138	6002	0.037	-0.0579	No
53	ADAMTSL1	2970092	6188	0.032	-0.0676	No
54	THRAP1	2470121	6434	0.027	-0.0806	No
55	MITF	380056	6574	0.024	-0.0879	No
56	NPR3	1580239	6666	0.021	-0.0926	No
57	CRH	3710301	6973	0.016	-0.1090	No
58	FGF7	5390484	7023	0.015	-0.1115	No
59	SLC2A4	540441	7047	0.014	-0.1126	No
60	IL17B	6940711	7434	0.008	-0.1334	No
61	KCNK3	2690372	7469	0.007	-0.1352	No
62	MYH11	7100273	7968	-0.001	-0.1622	No
63	HOXD10	6100039	8242	-0.006	-0.1769	No
64	MYL9	4210750 7050138	8443	-0.009	-0.1877	No
65	TAGLN	6660280	8531	-0.010	-0.1923	No
66	DIXDC1	6980435	8569	-0.011	-0.1942	No
67	MYO1E	3140504	9122	-0.020	-0.2239	No
68	NFATC4	2470735	9158	-0.021	-0.2256	No
69	ACTA1	840538	9285	-0.023	-0.2321	No
70	TRDN	1580411	9421	-0.025	-0.2392	No
71	ASPA	3290400	9578	-0.028	-0.2473	No
72	ABCA1	6290156	9957	-0.035	-0.2675	No
73	HOXC4	1940193	10070	-0.038	-0.2731	No
74	NRXN3	1400546 3360471	10243	-0.041	-0.2820	No
75	LPP	1660541	10461	-0.046	-0.2933	No
76	CXCL5	6370333	10633	-0.050	-0.3020	No
77	NKX2-2	4150731	10656	-0.050	-0.3027	No
78	KCNA1	2030594	10718	-0.052	-0.3054	No
79	CALN1	3610722	10720	-0.052	-0.3049	No
80	CNN1	510707	10741	-0.052	-0.3054	No
81	NPAS2	770670	10825	-0.054	-0.3093	No
82	BNC2	4810603	10897	-0.056	-0.3126	No
83	HOXC5	1580017	10899	-0.056	-0.3120	No
84	IER2	2030008	10975	-0.058	-0.3155	No
85	DSTN	3140592	11071	-0.061	-0.3200	No
86	TANK	1090020 2060458 2370400	11076	-0.061	-0.3195	No
87	ABR	610079 1170609 3610195 5670050	11331	-0.068	-0.3325	No
88	CALD1	1770129 1940397	11403	-0.070	-0.3356	No
89	RAI2	6770333	11484	-0.072	-0.3392	No
90	MLLT7	4480707	11595	-0.076	-0.3443	No
91	PLN	3940132	11784	-0.083	-0.3536	No
92	RASSF2	2480079 5720546	11794	-0.083	-0.3532	No
93	LRRFIP1	870259 1050204 2760377	11813	-0.083	-0.3533	No
94	CACNA1B	1740010 5360593	11890	-0.086	-0.3565	No
95	PODN	3710068	11899	-0.087	-0.3560	No
96	FLNC	2360048 5050270	11965	-0.089	-0.3585	No
97	CASQ1	6290035 7000707	11989	-0.090	-0.3588	No
98	CHST8	1940050	12020	-0.091	-0.3594	No
99	CA3	870687 5890390	12159	-0.097	-0.3659	No
100	ATF3	1940546	12166	-0.097	-0.3651	No
101	PPARG	1990168 2680603 6130632	12221	-0.100	-0.3670	No
102	TADA3L	4210070 5720088 6660333	12236	-0.100	-0.3667	No
103	HOXB5	2900538	12257	-0.101	-0.3667	No
104	RIMS1	5670022	12377	-0.107	-0.3719	No
105	DLL1	1770377	12872	-0.134	-0.3973	No
106	COL23A1	2030358	12919	-0.137	-0.3983	No
107	RSU1	4850372	12932	-0.138	-0.3974	No
108	SRD5A2	6840433	12982	-0.141	-0.3986	No
109	MYLK	4010600 7000364	13035	-0.144	-0.3998	No
110	ITGB1BP2	6200129	13080	-0.148	-0.4006	No
111	STAT5B	6200026	13123	-0.151	-0.4013	No
112	WNT3	2360685	13148	-0.153	-0.4009	No
113	FOXP2	3520561 4150372 4760524	13179	-0.155	-0.4008	No
114	PPAP2B	3190397 4730280	13206	-0.156	-0.4006	No
115	PCDH7	450398 4150040	13225	-0.158	-0.3998	No
116	TGFB1I1	2060288 6550450	13285	-0.163	-0.4013	No
117	PELI2	1940364	13377	-0.170	-0.4043	No
118	CITED2	5670114 5130088	13832	-0.213	-0.4267	No
119	ACTG2	4780180	13871	-0.217	-0.4264	No
120	PLCB3	4670402	13955	-0.227	-0.4284	No
121	FOXE3	6900102	14018	-0.234	-0.4292	No
122	SRF	70139 2320039	14038	-0.235	-0.4277	No
123	LRRTM4	5910100	14112	-0.243	-0.4290	No
124	GGN	1410528 4210082 5290170	14150	-0.249	-0.4284	No
125	MRGPRF	4780746	14252	-0.264	-0.4310	No
126	NRAS	6900577	14579	-0.314	-0.4452	No
127	MAP1A	4920576	14671	-0.329	-0.4466	No
128	FGF8	6350504	14763	-0.346	-0.4478	No
129	DVL3	360156 5390075	14939	-0.380	-0.4532	Yes
130	ELAVL4	50735 3360086 5220167	14942	-0.381	-0.4491	Yes
131	NPPA	6550328	14948	-0.382	-0.4453	Yes
132	FOS	1850315	14971	-0.386	-0.4423	Yes
133	NR2F1	4120528 360402	14973	-0.386	-0.4382	Yes
134	COL1A1	730020	15140	-0.422	-0.4426	Yes
135	TAF5L	5690152	15178	-0.430	-0.4399	Yes
136	ACTB	1660736 2030204 2060215 5050047	15190	-0.433	-0.4358	Yes
137	EGR3	6940128	15198	-0.434	-0.4315	Yes
138	TPM2	520735 3870390	15310	-0.461	-0.4325	Yes
139	JUNB	4230048	15452	-0.504	-0.4347	Yes
140	SLC4A3	360603 4730239 6380347	15538	-0.535	-0.4335	Yes
141	CFL2	380239 6200368	15581	-0.551	-0.4298	Yes
142	MYADM	4230132	15696	-0.592	-0.4296	Yes
143	SGK	1400131 2480056	15969	-0.698	-0.4368	Yes
144	FGFRL1	6370047	16069	-0.745	-0.4340	Yes
145	ANXA6	2190014	16137	-0.771	-0.4293	Yes
146	TLE3	580040 4730121	16160	-0.780	-0.4221	Yes
147	RHOJ	6660176	16164	-0.781	-0.4138	Yes
148	RUNDC1	2450037	16247	-0.824	-0.4093	Yes
149	EMILIN2	70253	16321	-0.857	-0.4039	Yes
150	TAZ	7100193	16586	-0.983	-0.4076	Yes
151	MRPS21	2650008	16736	-1.036	-0.4044	Yes
152	PFN1	6130132	16915	-1.144	-0.4017	Yes
153	VASP	7050500	16921	-1.147	-0.3895	Yes
154	H2AFX	3520082	17204	-1.332	-0.3904	Yes
155	CKM	1450524	17235	-1.346	-0.3774	Yes
156	EEF1B2	4850400 6130161	17418	-1.472	-0.3713	Yes
157	SERTAD4	130593	17424	-1.476	-0.3556	Yes
158	UBE2H	1980142 2970079	17455	-1.491	-0.3411	Yes
159	CDC25B	6940102	17519	-1.538	-0.3278	Yes
160	GRK6	1500053	17717	-1.715	-0.3199	Yes
161	CSRP1	2810403	17891	-1.880	-0.3089	Yes
162	CNN2	2230433 5270446	17910	-1.904	-0.2893	Yes
163	EGR1	4610347	17946	-1.942	-0.2701	Yes
164	BLOC1S1	130341 3940717	17951	-1.953	-0.2491	Yes
165	MUS81	6660184	17964	-1.968	-0.2285	Yes
166	PDLIM7	4780136	17992	-1.999	-0.2083	Yes
167	MYL6	60563 6100152	18078	-2.094	-0.1902	Yes
168	DUSP10	2850673 3360064	18250	-2.336	-0.1741	Yes
169	ARF6	3520026	18261	-2.362	-0.1491	Yes
170	ASB2	4760168	18396	-2.652	-0.1276	Yes
171	ARPC4	2900056	18417	-2.722	-0.0992	Yes
172	PADI2	2940092 6420136	18499	-2.975	-0.0713	Yes
173	FLNA	5390193	18554	-3.307	-0.0384	Yes
174	MAPKAPK2	2850500	18590	-3.846	0.0014	Yes