DatasetSet_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls
#wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls
#wtNotch_versus_truncNotch_repos
Phenotypephenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in classwtNotch
GeneSetCAGTATT,MIR-200B,MIR-200C,MIR-429
Enrichment Score (ES)0.5041791
Normalized Enrichment Score (NES)1.6935818
Nominal p-value0.0
FDR q-value0.014682399
FWER p-Value0.138
Table: GSEA Results Summary



Fig 1: Enrichment plot: CAGTATT,MIR-200B,MIR-200C,MIR-429   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SLC6A6610030054.3020.0198Yes
2SFRS12360440153.7750.0369Yes
3MARCKS7040450213.6740.0538Yes
4BRMS1L6110609223.6720.0710Yes
5PPP2CA3990113473.2900.0850Yes
6OGT2360131 46103331092.8290.0949Yes
7RHOT167606921122.8260.1080Yes
8ATP2A21090075 39902791642.6330.1175Yes
9TCEB111706191762.6050.1290Yes
10RANBP946706852072.5210.1392Yes
11NEDD128500442132.5160.1506Yes
12APRIN28100502242.4940.1617Yes
13SYVN169405942532.4240.1715Yes
14CDR262003772902.3550.1805Yes
15ADIPOR215100352912.3480.1915Yes
16RANBP1023401843222.2690.2005Yes
17SERINC166500203322.2430.2104Yes
18PRKACB42101703392.2350.2205Yes
19TBK156903383482.2220.2305Yes
20PDCD1047605003602.2010.2402Yes
21EGLN12480180 3120253 61101953612.1980.2504Yes
22CRKL40504273772.1730.2597Yes
23BCAP2923505003932.1500.2690Yes
24YWHAB17401764042.1330.2784Yes
25ARL8B37103684812.0140.2836Yes
26MSN40600445141.9720.2911Yes
27HNRPK1190348 2060411 2570092 68405515281.9380.2994Yes
28SESN121200215361.9260.3080Yes
29RAP2C16901325881.8680.3140Yes
30SMARCAD153906195891.8680.3227Yes
31RAP1B37101385991.8610.3309Yes
32KRAS20601706211.8380.3383Yes
33TSGA1466604656291.8290.3465Yes
34GIT26040039 67701816591.7900.3532Yes
35CNN361100207091.7390.3587Yes
36BCL11B26806737461.7040.3647Yes
37TOB141501387751.6710.3709Yes
38PHTF265900537951.6560.3776Yes
39CSNK1G31104508091.6400.3846Yes
40ZFYVE2064204008281.6200.3911Yes
41YWHAG37803418681.5810.3964Yes
42RKHD250035 39303008811.5640.4030Yes
43MMD38502399181.5140.4081Yes
44ITPR134505199381.4920.4141Yes
45DDX3X21900209491.4840.4204Yes
46ICK1580746 31400219631.4710.4266Yes
47OSBPL1117700449801.4550.4325Yes
48BRWD13130048 3140168 640060110341.3980.4362Yes
49SLC23A2666072210541.3800.4416Yes
50NFYA586036811391.2930.4430Yes
51RAC1481068711461.2830.4487Yes
52FLI1399014211671.2660.4535Yes
53ULK250041 505017612881.1640.4523Yes
54KHDRBS11240403 604004012971.1520.4573Yes
55HNRPU652073613511.1140.4596Yes
56TBP1450601 281019314281.0500.4603Yes
57PDPK1665016815301.0010.4595Yes
58CNOT72450338 572039715371.0000.4638Yes
59PSIP11780082 3190435 505059415680.9870.4668Yes
60DCUN1D1236033216090.9720.4691Yes
61PARP63290332 4760167 690018116380.9500.4720Yes
62ASF1A705002016610.9310.4752Yes
63RPS6KA3198070717110.9020.4767Yes
64TRIM33580619 2230280 3990433 620074717460.8790.4790Yes
65NUDT4676068917750.8600.4814Yes
66RTF1210073518430.8180.4816Yes
67ZC3H613071118450.8170.4854Yes
68PCAF2230161 2570369 655045118510.8120.4889Yes
69MAFG412044019780.7390.4854Yes
70HS2ST1317008819910.7310.4882Yes
71RPS6KA22970161 473027820040.7260.4909Yes
72KLF9384002220090.7220.4941Yes
73AMFR281004120610.6870.4945Yes
74CNOT42320242 676070620690.6850.4973Yes
75DAG1460053 61034120960.6730.4990Yes
76PPP1R10110136 3170725 361048421130.6660.5012Yes
77FBXO33151050421170.6640.5042Yes
78FN11170601 2970647 6220288 694003724650.5170.4876No
79PRKAR2B3130593 522057725120.5010.4874No
80STX1A306027325520.4870.4876No
81LCP1428039725870.4750.4879No
82NR3C163056326010.4700.4894No
83AEBP2297060327530.4230.4831No
84YTHDF34540632 4670717 704060927600.4210.4848No
85ORMDL3134071127650.4190.4865No
86FOXK12640373 329013627820.4110.4875No
87EVI5638004029200.3670.4818No
88SEC23A586003529500.3560.4818No
89PTBP1407073630780.3190.4764No
90FHOD1268027931100.3100.4761No
91LFNG536071131540.2970.4752No
92CORO1C457039732480.2780.4714No
93CHD9430037 2570129 542039832530.2770.4724No
94RAB6IP1415004433020.2650.4710No
95LAMC1473002533060.2640.4721No
96IGSF3645052433420.2550.4714No
97CALU2680403 3520056 4610348 5720176 613012133700.2510.4711No
98RECK84007934430.2350.4682No
99ANK31500161 2900435 4210154 640010034540.2330.4688No
100TMEFF24480161 620020434570.2320.4698No
101NR5A21690180 690005034940.2260.4688No
102CLASP1686027935290.2180.4680No
103ARHGEF17206000836320.2000.4633No
104GLRA2700001937030.1890.4604No
105GABPA2360017 4780301 485027937040.1880.4613No
106RGL11500097 690045037080.1880.4620No
107CYP1B1476073537240.1850.4620No
108LRP4174025337310.1840.4626No
109PIN1297040837580.1800.4620No
110OLIG3105060338220.1710.4593No
111BAP1383013138450.1680.4589No
112PKIA407044139050.1580.4564No
113LASS65890576 652013839910.1490.4525No
114SSH236005640390.1420.4506No
115QKI5220093 613004440720.1390.4495No
116PKD1604067140800.1380.4497No
117PHF21A61001441130.1350.4486No
118EIF2S1536029241270.1340.4485No
119NAB1430739 1230114 3390736 666005641600.1300.4474No
120NCOA2940347 285072541750.1290.4472No
121MAP4K4236005942370.1250.4445No
122NBR12810451 640006642570.1230.4440No
123HNRPD412002142900.1200.4428No
124KLF41850022 3830239 557075043850.1110.4382No
125PALM24120068 710039844100.1090.4374No
126HNRPH22630040 572067144310.1070.4368No
127CACNA1C1660128 3780300 3870092 6290403 690030144770.1040.4348No
128SULF143057544920.1030.4345No
129AKAP2555034745420.0990.4323No
130PCTK2570067345900.0960.4302No
131KCNJ263001946300.0940.4285No
132E2F350162 46018047480.0860.4225No
133DNAJB62810309 557045147970.0830.4202No
134TIAL14150048 651060548130.0820.4198No
135PIP5K3536011248250.0820.4196No
136EFNB2534013649060.0770.4155No
137HIPK111019349340.0760.4144No
138DDX3Y1580278 420051949680.0750.4130No
139KCNK21230592 700049750230.0720.4103No
140GNAI3467073950400.0710.4098No
141FGFR24670601 5570402 694037750950.0690.4072No
142LRP1B145019353100.0600.3957No
143BIRC41400129 696012854520.0540.3883No
144NEGR11940731 513017054940.0530.3863No
145UBE2I2680056 635044656620.0470.3774No
146SLC6A194016857470.0440.3730No
147NOG232060958330.0420.3685No
148USP25352003558530.0410.3677No
149ATRX2340039 3610132 421037358630.0410.3674No
150CAB39572047159260.0390.3642No
151TCF2870338 505063259330.0390.3640No
152NGEF319053859470.0380.3635No
153KLF10485005659710.0380.3624No
154CBX47033259740.0380.3625No
155NUP153700045260850.0350.3566No
156UBE2B478049761340.0330.3541No
157KCNQ43800438 705040062220.0320.3495No
158NRP24070400 5860041 665044663070.0300.3451No
159PLS3329008263650.0280.3421No
160GOLGA7698012163740.0280.3418No
161THRAP1247012164340.0270.3387No
162GEM529008264680.0260.3370No
163ACE2336044666020.0230.3298No
164CCNJ87004766720.0210.3261No
165PAM529052867510.0200.3220No
166KCTD8666059368170.0180.3185No
167RND394050468700.0180.3157No
168MYT1677052469420.0160.3119No
169AP1S2780279 428070769580.0160.3112No
170CRH371030169730.0160.3105No
171PUM24200441 591044670130.0150.3084No
172GDI2237006870700.0140.3054No
173ZIC338002070840.0130.3048No
174TAF4145017071570.0120.3009No
175CLASP2251013972040.0110.2984No
176ST6GALNAC5294040073480.0090.2906No
177CNTN41780300 5570577 637001973520.0090.2905No
178DACH12450593 570059273950.0080.2882No
179AKAP7461004474090.0080.2876No
180UBE2D1185040074520.0070.2853No
181FBXW11645063274580.0070.2851No
182NDST11500427 534012178810.0000.2620No
183NPC145900207958-0.0010.2578No
184EFNA138406728028-0.0020.2541No
185MAP4K353905518076-0.0030.2515No
186DMRT226300688085-0.0030.2511No
187PCDH82360047 42004528099-0.0030.2504No
188RPS6KB11450427 5080110 62005638450-0.0090.2313No
189SCHIP145601528526-0.0100.2272No
190BHLHB334504388625-0.0120.2219No
191MTUS1780348 49206098643-0.0120.2210No
192HMGB329401688648-0.0120.2209No
193ESRRG40101818690-0.0130.2187No
194MPP52100148 52206328832-0.0150.2110No
195PLEKHC126500668839-0.0150.2108No
196MYB1660494 5860451 61307068845-0.0150.2106No
197TEAD124705518866-0.0160.2096No
198EIF5B1190102 42004408976-0.0180.2037No
199KCND21170128 21001129009-0.0180.2020No
200NPM147304279124-0.0200.1959No
201LIN7B1850546 3850288 67601109211-0.0220.1913No
202NIPA13806009310-0.0240.1860No
203MMD249201009433-0.0260.1795No
204ACVR2A61106479468-0.0260.1777No
205TRIM2430546 11702869482-0.0270.1771No
206TRAM1L1501289496-0.0270.1766No
207SYT18403649554-0.0280.1736No
208EPS870502049559-0.0280.1735No
209NFIA2760129 58602789571-0.0280.1730No
210GATA265902809668-0.0290.1679No
211SBF163807079708-0.0300.1659No
212ARID4B730754 66600269806-0.0320.1607No
213OCLN25706719935-0.0350.1539No
214WDFY33610041 4560333 45702739973-0.0360.1520No
215GATA41410215 269060910033-0.0370.1490No
216DACT1150005010128-0.0390.1440No
217GPM6A1660044 275015210198-0.0400.1404No
218CASR61050410263-0.0410.1371No
219LRRTM3421002110308-0.0420.1349No
220LEPR1340398 319032410351-0.0430.1328No
221EDG2629021510390-0.0440.1309No
222BASP1570004410406-0.0450.1303No
223PARD6B412060010431-0.0450.1292No
224B3GNT1235044610467-0.0460.1275No
225NRIP1319003910549-0.0480.1233No
226SLC38A41340059 539051910617-0.0500.1199No
227HLF237011310626-0.0500.1197No
228PPP1R9B313061910678-0.0510.1171No
229RKHD3618047110681-0.0510.1172No
230SOX163002610684-0.0510.1174No
231PRDM13170347 352030110848-0.0550.1087No
232TUBB2A694043510884-0.0560.1071No
233NAP1L536057610955-0.0570.1035No
234CDH111230133 2100180 461011011003-0.0590.1012No
235ACY1L2314014211161-0.0630.0929No
236FMR1505007511166-0.0630.0930No
237PPP4R2589003511178-0.0630.0927No
238TNFRSF11B461044611209-0.0640.0913No
239PAK7383016411211-0.0640.0916No
240LHFP344036811233-0.0650.0907No
241MGAT2476054611264-0.0660.0894No
242AMOTL2473008211479-0.0720.0780No
243IER5235057511613-0.0760.0711No
244PLCL1237016711716-0.0800.0659No
245NPTX1371073611719-0.0800.0661No
246ZFPM246007211783-0.0820.0631No
247SLC1A2223052011915-0.0870.0563No
248FREQ3140039 4060600 456067012025-0.0910.0508No
249SEMA6D4050324 5860138 635030712249-0.1010.0391No
250ELF21690014 2480132 3060180 319050412261-0.1010.0389No
251FBXW2428001712426-0.1090.0305No
252MFAP5492013912503-0.1130.0268No
253KLF121660095 4810288 5340546 652028612544-0.1150.0252No
254NXPH1387054612561-0.1160.0248No
255SCN3B840112 1780152 5910685 610013112600-0.1190.0233No
256CNTFR4480092 620006412713-0.1240.0178No
257ELAVL236018112761-0.1270.0158No
258GLI3569014812775-0.1280.0157No
259NTF3589013112873-0.1340.0110No
260EIF2B5430315 690040012912-0.1370.0096No
261FHL16027812986-0.1410.0062No
262HS3ST1185019313008-0.1430.0057No
263CREB5232036813030-0.1440.0053No
264DNMT3A4050068 481071713051-0.1460.0048No
265SDC2198016813129-0.1510.0013No
266PPAP2B3190397 473028013206-0.156-0.0021No
267PCDH7450398 415004013225-0.158-0.0023No
268SOX2630487 223049113234-0.159-0.0020No
269ADCY2461010013343-0.167-0.0072No
270SMURF2194016113405-0.172-0.0097No
271SNAP2536052013520-0.183-0.0151No
272ANLN1780113 2470537 684004713567-0.187-0.0167No
273HECTD22680014 306068913619-0.192-0.0186No
274VLDLR870722 3060047 5340452 655013113673-0.197-0.0206No
275TSC22D11340739 604018113792-0.209-0.0261No
276PPP2R5C3310121 665067213818-0.212-0.0265No
277CITED25670114 513008813832-0.213-0.0262No
278CLIC41230025 3190180 3290368 645018113910-0.221-0.0293No
279ACACA2490612 268036913949-0.226-0.0304No
280YPEL2556060914027-0.235-0.0335No
281SRF70139 232003914038-0.235-0.0329No
282RAB21557007014105-0.242-0.0354No
283SLC14A11580458 2230707 570015414174-0.253-0.0380No
284PTHLH529073914223-0.260-0.0394No
285DNAJB5290021514367-0.277-0.0459No
286CSMD31660427 194068714391-0.280-0.0459No
287PHACTR33850435 590044514402-0.282-0.0451No
288CDYL4200142 4730397 606040014418-0.284-0.0446No
289PHF63120632 399004114457-0.291-0.0453No
290AFF3387010214584-0.315-0.0507No
291DDEF11170411 407046514642-0.325-0.0523No
292OXR12370039 319070614703-0.336-0.0540No
293MATR31940170 534027814770-0.346-0.0560No
294SEMA3F5420601 677073114908-0.372-0.0618No
295NDN567007514987-0.389-0.0643No
296ATXN1555015615042-0.402-0.0653No
297FBXW74210338 705028015058-0.405-0.0643No
298NIN3450576 508004815109-0.414-0.0651No
299PAPOLA4200286 485011215110-0.415-0.0631No
300PCNP61076815194-0.433-0.0656No
301EGR3694012815198-0.434-0.0638No
302LRP1627038615273-0.453-0.0657No
303ETS15270278 6450717 662046515339-0.470-0.0671No
304DLC11090632 645059415517-0.529-0.0743No
305CFL2380239 620036815581-0.551-0.0752No
306PTPN13206068115613-0.565-0.0742No
307FEZ2591018115689-0.591-0.0756No
308TUBB3407028015716-0.600-0.0742No
309RABIF2370458 591054315795-0.627-0.0755No
310LYPLA2150011215825-0.634-0.0742No
311IHPK1134005315889-0.661-0.0745No
312THAP14280025 572030916195-0.794-0.0875No
313TUBB730670 339003716289-0.844-0.0886No
314PPM1F770687 124059216388-0.890-0.0899No
315SLC16A2666073916413-0.899-0.0870No
316GOSR21850059 1980687 459018416433-0.907-0.0838No
317COPS8281054116444-0.912-0.0801No
318TARDBP870390 235009316452-0.917-0.0762No
319HIC2401043316466-0.923-0.0726No
320SLC38A21470242 380002616616-0.995-0.0761No
321RHOA580142 5900131 534045016637-0.998-0.0725No
322PLK2645015216838-1.085-0.0784No
323ARHGDIA590023916922-1.148-0.0776No
324RNF5276008817081-1.248-0.0804No
325HDHD22850411 694016817083-1.249-0.0746No
326FGD1478002117139-1.285-0.0716No
327DGKA5720152 589032817279-1.374-0.0728No
328PCTK1456007917350-1.425-0.0700No
329BAT3199059417379-1.448-0.0647No
330UBQLN1110280 730376 2470133 659059417403-1.463-0.0592No
331ARID2110647 539043517432-1.479-0.0538No
332SMARCD13060193 3850184 640036917492-1.521-0.0499No
333KCTD15281073517500-1.526-0.0432No
334SCD268044117634-1.633-0.0428No
335MXD3622001417756-1.745-0.0413No
336PPM1B380180 450154 361021517827-1.823-0.0366No
337GPR146383033318230-2.297-0.0479No
338HRB1660397 611039818275-2.382-0.0392No
339RDH10665007018306-2.433-0.0295No
340SFRS250707 38059318457-2.828-0.0245No
341ETV511001718559-3.357-0.0143No
342DUSP1686012118587-3.7270.0016No
Table: GSEA details [plain text format]



Fig 2: CAGTATT,MIR-200B,MIR-200C,MIR-429   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CAGTATT,MIR-200B,MIR-200C,MIR-429: Random ES distribution   
Gene set null distribution of ES for CAGTATT,MIR-200B,MIR-200C,MIR-429