Details for gene set HSA04110_CELL

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	wtNotch
GeneSet	HSA04110_CELL_CYCLE
Enrichment Score (ES)	0.5937808
Normalized Enrichment Score (NES)	1.7611344
Nominal p-value	0.0
FDR q-value	0.046215873
FWER p-Value	0.358

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SMAD4	5670519	68	3.059	0.0287	Yes
2	ANAPC1	6350162	106	2.840	0.0568	Yes
3	ORC6L	2260592	171	2.619	0.0811	Yes
4	CCNB1	4590433 4780372	211	2.518	0.1056	Yes
5	RBL1	3130372	220	2.502	0.1317	Yes
6	BUB1B	1450288	261	2.413	0.1550	Yes
7	ANAPC4	4540338	272	2.384	0.1798	Yes
8	MAD2L1	4480725	273	2.379	0.2049	Yes
9	CCNH	3190347	309	2.289	0.2273	Yes
10	CCND1	460524 770309 3120576 6980398	346	2.224	0.2489	Yes
11	HDAC2	4050433	372	2.188	0.2707	Yes
12	RB1	5900338	390	2.152	0.2926	Yes
13	YWHAB	1740176	404	2.133	0.3145	Yes
14	SKP2	360711 380093 4810368	483	2.012	0.3316	Yes
15	PCNA	940754	526	1.941	0.3498	Yes
16	ANAPC5	730164 7100685	597	1.862	0.3658	Yes
17	CDC7	4060546 4850041	725	1.718	0.3771	Yes
18	CUL1	1990632	772	1.677	0.3924	Yes
19	SMAD2	4200592	806	1.643	0.4080	Yes
20	ATR	6860273	844	1.606	0.4230	Yes
21	YWHAG	3780341	868	1.581	0.4385	Yes
22	MCM4	2760673 5420711	904	1.538	0.4529	Yes
23	HDAC1	2850670	976	1.456	0.4645	Yes
24	ORC5L	1940133 1940711	1013	1.414	0.4775	Yes
25	CCNE2	3120537	1049	1.388	0.4903	Yes
26	CDKN1C	6520577	1081	1.353	0.5030	Yes
27	SMC1A	3060600 5700148 5890113 6370154	1333	1.130	0.5014	Yes
28	GSK3B	5360348	1347	1.119	0.5125	Yes
29	CREBBP	5690035 7040050	1378	1.091	0.5224	Yes
30	CDKN2A	4670215 4760047	1380	1.090	0.5339	Yes
31	CDC16	1940706	1589	0.980	0.5331	Yes
32	CDC14A	4050132	1639	0.950	0.5405	Yes
33	TFDP1	1980112	1671	0.926	0.5486	Yes
34	MCM6	60092 540181 6510110	1822	0.831	0.5493	Yes
35	YWHAZ	1230717	1828	0.828	0.5578	Yes
36	ABL1	1050593 2030050 4010114	1898	0.789	0.5624	Yes
37	CDC45L	70537 3130114	2050	0.690	0.5616	Yes
38	E2F2	5270609 5570377 7000465	2122	0.660	0.5647	Yes
39	ORC3L	3060348	2146	0.649	0.5704	Yes
40	CDC6	4570296 5360600	2159	0.641	0.5765	Yes
41	CCND3	380528 730500	2164	0.637	0.5830	Yes
42	CCNA2	5290075	2176	0.634	0.5891	Yes
43	CDC25A	3800184	2212	0.617	0.5938	Yes
44	MCM7	3290292 5220056	2334	0.569	0.5933	No
45	YWHAQ	6760524	2432	0.532	0.5937	No
46	ORC4L	4230538 5550288	2535	0.494	0.5934	No
47	TGFB3	1070041	2702	0.438	0.5891	No
48	MDM2	3450053 5080138	2893	0.375	0.5828	No
49	CDK2	130484 2260301 4010088 5050110	3216	0.284	0.5684	No
50	GADD45G	2510142	3423	0.240	0.5598	No
51	ORC1L	2370328 6110390	3473	0.230	0.5596	No
52	YWHAE	5310435	3768	0.178	0.5456	No
53	WEE1	3390070	3884	0.160	0.5411	No
54	ORC2L	1990470 6510019	4029	0.144	0.5348	No
55	CDKN1B	3800025 6450044	4044	0.142	0.5356	No
56	RBX1	2120010 2340047	4144	0.132	0.5316	No
57	RBL2	580446 1400670	4187	0.128	0.5307	No
58	CDC25C	2570673 4760161 6520707	4241	0.124	0.5291	No
59	ATM	3610110 4050524	4686	0.090	0.5061	No
60	PTTG1	520463	4733	0.086	0.5045	No
61	E2F3	50162 460180	4748	0.086	0.5047	No
62	CDC23	3190593	5157	0.066	0.4834	No
63	CHEK1	50167 1940300	5327	0.059	0.4749	No
64	CCNB2	6510528	5570	0.050	0.4623	No
65	YWHAH	1660133 2810053	5715	0.045	0.4550	No
66	ANAPC10	870086 1170037 2260129	6773	0.019	0.3981	No
67	CDKN1A	4050088 6400706	6815	0.019	0.3961	No
68	CCNA1	6290113	7823	0.001	0.3417	No
69	BUB1	5390270	8457	-0.009	0.3076	No
70	CCND2	5340167	8718	-0.014	0.2937	No
71	SMC1B	2450397	9464	-0.026	0.2538	No
72	CDK7	2640451	10877	-0.056	0.1781	No
73	CCNB3	3360600	11528	-0.074	0.1437	No
74	TGFB2	4920292	11864	-0.085	0.1265	No
75	ANAPC2	6660438	12550	-0.116	0.0908	No
76	PLK1	1780369 2640121	13227	-0.159	0.0559	No
77	MCM3	5570068	13403	-0.172	0.0483	No
78	CDKN2B	6020040	13572	-0.187	0.0412	No
79	ANAPC11	1780601	13588	-0.189	0.0424	No
80	PRKDC	1400072 4230541	13689	-0.199	0.0391	No
81	SFN	6290301 7510608	14286	-0.268	0.0097	No
82	CDC14B	2320497 3360162	14581	-0.314	-0.0028	No
83	CDKN2D	6040035	14900	-0.370	-0.0161	No
84	MCM5	2680647	15085	-0.411	-0.0217	No
85	CDC20	3440017 3440044 6220088	15103	-0.413	-0.0182	No
86	BUB3	3170546	15220	-0.440	-0.0198	No
87	TP53	6130707	15236	-0.442	-0.0159	No
88	CDC26	5570279	15242	-0.444	-0.0115	No
89	MCM2	5050139	15297	-0.459	-0.0096	No
90	CHEK2	610139 1050022	15319	-0.465	-0.0058	No
91	CDK6	4920253	15335	-0.469	-0.0016	No
92	E2F1	5360093	15379	-0.483	0.0012	No
93	GADD45A	2900717	15472	-0.512	0.0016	No
94	TGFB1	1940162	15749	-0.610	-0.0068	No
95	CDKN2C	5050750 5130148	15989	-0.707	-0.0123	No
96	MAD1L1	5700035	15994	-0.712	-0.0049	No
97	GADD45B	2350408	16116	-0.766	-0.0034	No
98	FZR1	6220504 6660670	17180	-1.320	-0.0468	No
99	CCNE1	110064	17292	-1.384	-0.0381	No
100	CDC25B	6940102	17519	-1.538	-0.0341	No
101	MAD2L2	1240358	17788	-1.784	-0.0297	No
102	CDK4	540075 4540600	18101	-2.120	-0.0241	No
103	SMAD3	6450671	18195	-2.238	-0.0054	No
104	ANAPC7	5260274	18397	-2.652	0.0118	No