Details for gene set HCC_SURVIVAL_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	HCC_SURVIVAL_GOOD_VS_POOR_UP
Enrichment Score (ES)	-0.65046614
Normalized Enrichment Score (NES)	-1.8035753
Nominal p-value	0.0
FDR q-value	0.03065439
FWER p-Value	0.034

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SRD5A1	5910347	2011	0.720	-0.0967	No
2	AMFR	2810041	2061	0.687	-0.0879	No
3	SEC14L2	2640370	2163	0.638	-0.0827	No
4	STARD10	1400619 4570170	2183	0.632	-0.0732	No
5	MRPL46	360736	2248	0.602	-0.0666	No
6	ALAS1	6400440	2249	0.602	-0.0566	No
7	ITPR2	5360128	2737	0.428	-0.0758	No
8	AR	6380167	3059	0.323	-0.0878	No
9	IL6R	520706 3800215	3082	0.318	-0.0836	No
10	SPINK2	3990093	3202	0.287	-0.0853	No
11	EHHADH	6200315	3380	0.250	-0.0907	No
12	F10	3830450	3564	0.209	-0.0971	No
13	SLC27A5	2850717	3803	0.173	-0.1071	No
14	WNT11	1230278	4958	0.075	-0.1682	No
15	HGD	460390	5205	0.064	-0.1804	No
16	DIO1	4570279 5290112 5420148	5226	0.063	-0.1805	No
17	MTSS1	780435 2370114	6048	0.035	-0.2242	No
18	ASGR1	1850088	6091	0.034	-0.2259	No
19	CES3	5050167 3290458	6115	0.034	-0.2266	No
20	MYRIP	1580471	6133	0.033	-0.2270	No
21	SLC2A2	5130537 5720722 6770079	6166	0.033	-0.2282	No
22	CES1	1400494	6198	0.032	-0.2293	No
23	HPD	3120519	6323	0.029	-0.2355	No
24	CABIN1	6900446	6439	0.027	-0.2413	No
25	HYAL1	3850341	6566	0.024	-0.2477	No
26	SALL1	5420020 7050195	6955	0.016	-0.2684	No
27	MST1	1400403	7424	0.008	-0.2936	No
28	BAAT	730739	7518	0.006	-0.2985	No
29	SULT2A1	2650286	7549	0.006	-0.3000	No
30	ABCG5	2810670	7582	0.005	-0.3017	No
31	PIPOX	70750	7806	0.002	-0.3137	No
32	PAH	3800309	7857	0.001	-0.3164	No
33	APOA5	6130471	7899	-0.000	-0.3186	No
34	PCK1	7000358	8121	-0.004	-0.3305	No
35	CUTL2	2940692 6220687	8126	-0.004	-0.3306	No
36	ITIH1	670044	8128	-0.004	-0.3306	No
37	TTBK1	60605 1850722	8480	-0.009	-0.3494	No
38	PKLR	1170400 2470114	8549	-0.011	-0.3529	No
39	ANXA9	1190195	8621	-0.012	-0.3566	No
40	TTPA	630576	8665	-0.013	-0.3587	No
41	FMO3	2480369	8729	-0.014	-0.3618	No
42	AOX1	110082 6290450	8902	-0.016	-0.3709	No
43	NF1	6980433	8913	-0.017	-0.3711	No
44	RHBG	2810736	8941	-0.017	-0.3723	No
45	SLC6A12	3170685	8952	-0.018	-0.3726	No
46	CES2	5340609	9226	-0.022	-0.3869	No
47	APOC3	2030168	9315	-0.024	-0.3913	No
48	SERPINC1	1780717	9506	-0.027	-0.4011	No
49	APCS	2060500	9650	-0.029	-0.4084	No
50	UGT1A6	4610368 6900086 4540092 2630075	9742	-0.031	-0.4128	No
51	CDO1	2480279	9790	-0.032	-0.4148	No
52	AMACR	780215	9892	-0.034	-0.4197	No
53	LPIN1	1770358 3120059	9943	-0.035	-0.4218	No
54	MPDZ	130026 1990064 4050577	10020	-0.037	-0.4253	No
55	HAO1	7050093	10300	-0.042	-0.4397	No
56	OTC	1740494	10362	-0.043	-0.4422	No
57	DPYS	3130670	10641	-0.050	-0.4564	No
58	F13B	6220278	10839	-0.055	-0.4662	No
59	MUCDHL	5720056	11218	-0.064	-0.4855	No
60	KLK3	1500278	11272	-0.066	-0.4873	No
61	ABCA6	130538 1050706	11418	-0.070	-0.4939	No
62	AQP9	2650047	11558	-0.075	-0.5002	No
63	CPB2	4150167 6100333 6590735	11692	-0.079	-0.5061	No
64	ZP3	4060767	11801	-0.083	-0.5105	No
65	RGN	6200095	12275	-0.102	-0.5344	No
66	ABCC2	380202 5390300	12532	-0.115	-0.5463	No
67	SGPL1	4480059	12611	-0.119	-0.5485	No
68	ABCG8	4780605	12647	-0.121	-0.5484	No
69	SERPIND1	6110059	12832	-0.132	-0.5562	No
70	PRDX6	4920397 6380601	13000	-0.142	-0.5628	No
71	GJB1	1240441	13194	-0.156	-0.5707	No
72	MSRA	4570411	13434	-0.175	-0.5807	No
73	CPN2	6590291	13641	-0.194	-0.5886	No
74	VPREB1	3520280	13725	-0.202	-0.5897	No
75	RDH5	2970736 3940632 5340730 6370093 4610059	13783	-0.209	-0.5893	No
76	AMT	3180450	14400	-0.282	-0.6179	No
77	INSIG1	1500332 3450458 4540301	14463	-0.292	-0.6164	No
78	GLYAT	6200239	14548	-0.308	-0.6158	No
79	CRAT	540020 2060364 3520148	14576	-0.314	-0.6120	No
80	SLC38A3	5340142	14773	-0.346	-0.6168	No
81	F12	1090215 3520736	14910	-0.372	-0.6180	No
82	HAGH	540358	15084	-0.410	-0.6205	No
83	INSR	1190504	15094	-0.412	-0.6141	No
84	PPAP2A	1170397 3440288 3930270	15449	-0.503	-0.6249	No
85	IVD	2510673	15924	-0.678	-0.6392	Yes
86	G6PC	430093	16006	-0.716	-0.6316	Yes
87	MASP2	360110	16303	-0.848	-0.6335	Yes
88	MVK	1450717	16445	-0.913	-0.6259	Yes
89	PCYT2	2630092 4590278	16568	-0.974	-0.6163	Yes
90	ACOX2	450017	16576	-0.977	-0.6004	Yes
91	SELENBP1	3850575	16747	-1.041	-0.5922	Yes
92	C1QTNF4	60619	16752	-1.045	-0.5750	Yes
93	SLC35D1	1740520	17107	-1.261	-0.5731	Yes
94	ECHS1	2970184	17203	-1.330	-0.5561	Yes
95	NDRG2	450403	17220	-1.340	-0.5346	Yes
96	ENPP5	1780338	17365	-1.435	-0.5185	Yes
97	SERPINF1	7040367	17622	-1.624	-0.5053	Yes
98	PINK1	380044 580577	17686	-1.691	-0.4805	Yes
99	ALDH4A1	2450450	17714	-1.712	-0.4534	Yes
100	SERPING1	5550440	17774	-1.761	-0.4273	Yes
101	NDUFS2	4850020 6200402	17779	-1.771	-0.3980	Yes
102	MAP4K1	4060692	17806	-1.804	-0.3693	Yes
103	CPT2	3940504 6180075	17811	-1.808	-0.3394	Yes
104	SLC25A10	1400609	17925	-1.919	-0.3135	Yes
105	CRYL1	1340427	17941	-1.935	-0.2821	Yes
106	ABHD6	630717	17973	-1.974	-0.2509	Yes
107	EPHX1	1740136	17976	-1.976	-0.2181	Yes
108	PCCB	50670	18051	-2.056	-0.1878	Yes
109	EGLN2	540086	18119	-2.139	-0.1558	Yes
110	KHK	1090204 3870204	18246	-2.330	-0.1237	Yes
111	DCXR	4730551	18431	-2.757	-0.0877	Yes
112	ACADS	110746	18489	-2.930	-0.0420	Yes
113	C2	5390465	18490	-2.930	0.0068	Yes