Details for gene set CYTOKINE

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	CYTOKINE_PRODUCTION
Enrichment Score (ES)	-0.6626204
Normalized Enrichment Score (NES)	-1.5552089
Nominal p-value	0.005172414
FDR q-value	0.2137352
FWER p-Value	0.984

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SOD1	5890070	542	2.827	0.0195	No
2	APOA1	110152	1330	1.691	0.0063	No
3	INHBB	2680092	1342	1.677	0.0346	No
4	BCL3	3990440	1455	1.580	0.0559	No
5	CADM1	6620128	1851	1.233	0.0558	No
6	MAP3K7	6040068	2753	0.679	0.0190	No
7	IL12A	7100551	3220	0.492	0.0024	No
8	MALT1	4670292	3693	0.324	-0.0175	No
9	ELA2	1570452 5270129	3704	0.323	-0.0125	No
10	INHA	6100102	4481	0.181	-0.0512	No
11	TLR7	3140300	5040	0.129	-0.0790	No
12	APOA2	6510364 6860411	5058	0.127	-0.0777	No
13	IL4	6020537	5544	0.100	-0.1021	No
14	NLRC4	5570332	5901	0.083	-0.1199	No
15	TNFRSF8	870136 4810446	5934	0.082	-0.1202	No
16	ATP6AP2	4010059 5080315 7100347 6660484	5971	0.080	-0.1208	No
17	IL12B	460008	5992	0.079	-0.1205	No
18	TLR3	6760451	6944	0.049	-0.1709	No
19	CHRNA7	2970446	7253	0.042	-0.1868	No
20	TLR4	1690167 2650369 3850333	8252	0.023	-0.2402	No
21	TLR8	1240092	8272	0.022	-0.2408	No
22	TLR9	670093 670706	8988	0.010	-0.2792	No
23	IL9	3440338	9217	0.007	-0.2913	No
24	CD40LG	3120270	9515	0.003	-0.3073	No
25	IL6	380133	10184	-0.007	-0.3432	No
26	CIDEA	4560020	10343	-0.009	-0.3515	No
27	HIF1A	5670605	10446	-0.011	-0.3568	No
28	NLRP3	1980064 4010180	10654	-0.014	-0.3677	No
29	CALCA	5860167	10676	-0.015	-0.3686	No
30	GLMN	5290563 5890239	10783	-0.016	-0.3741	No
31	ABCA1	6290156	10877	-0.018	-0.3788	No
32	EREG	50519 4920129	10971	-0.019	-0.3835	No
33	IL27	1990324	10990	-0.020	-0.3841	No
34	NOD2	2510050	11446	-0.027	-0.4081	No
35	IL18	6180039	12002	-0.038	-0.4374	No
36	IL17F	670577	12235	-0.044	-0.4491	No
37	GHSR	1980465 7050521	12284	-0.045	-0.4509	No
38	TLR1	1410524	12703	-0.056	-0.4725	No
39	IFNG	5670592	13106	-0.070	-0.4930	No
40	NLRP2	580750	13221	-0.075	-0.4978	No
41	SFTPD	6510181	13521	-0.089	-0.5124	No
42	CD24	1780091	13708	-0.100	-0.5207	No
43	TGFB2	4920292	14066	-0.126	-0.5378	No
44	CRTAM	4480110	14244	-0.144	-0.5448	No
45	GHRL	2360619 6760438	14511	-0.169	-0.5562	No
46	TLR6	510102 3390148	15077	-0.275	-0.5820	No
47	PRG3	6220020	15435	-0.380	-0.5946	No
48	EBI3	5340300	16138	-0.733	-0.6198	No
49	FOXP3	940707 1850692	16933	-1.277	-0.6406	Yes
50	IRF4	610133	16945	-1.290	-0.6189	Yes
51	TRAF6	4810292 6200132	17171	-1.553	-0.6043	Yes
52	TRAF2	5900148	17246	-1.660	-0.5796	Yes
53	CD28	1400739 4210093	17840	-2.716	-0.5647	Yes
54	PYCARD	2100750	17945	-2.968	-0.5192	Yes
55	SPN	3520338 3870671	17994	-3.071	-0.4688	Yes
56	SMAD4	5670519	18003	-3.085	-0.4160	Yes
57	BCL10	2360397	18036	-3.190	-0.3627	Yes
58	MAST2	6200348	18154	-3.654	-0.3060	Yes
59	SMAD3	6450671	18312	-4.441	-0.2378	Yes
60	NOD1	2360368	18318	-4.467	-0.1610	Yes
61	CARD11	70338	18353	-4.684	-0.0821	Yes
62	LTB	3990672	18454	-5.577	0.0087	Yes