Details for gene set V$NKX61

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	V$NKX61_01
Enrichment Score (ES)	-0.5740564
Normalized Enrichment Score (NES)	-1.5237049
Nominal p-value	0.0
FDR q-value	0.11999257
FWER p-Value	0.74

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	WNT8B	4560301	661	2.596	-0.0115	No
2	LMNA	520471 1500075 3190167 4210020	889	2.200	-0.0032	No
3	MBNL2	3450707	1087	1.929	0.0041	No
4	CXCL13	6290402	1109	1.898	0.0208	No
5	CUL3	1850520	1147	1.860	0.0362	No
6	ATP2A2	1090075 3990279	1522	1.512	0.0301	No
7	TYRO3	3130193	2400	0.878	-0.0092	No
8	NTNG2	1770438 6380408	2416	0.873	-0.0019	No
9	ZADH2	520438	2625	0.746	-0.0062	No
10	TCF4	520021	2646	0.737	-0.0003	No
11	DTNA	1340600 1780731 2340278 2850132	2772	0.670	-0.0008	No
12	VAMP3	7100050	2790	0.663	0.0044	No
13	STOML2	1940487	2880	0.626	0.0055	No
14	PRKAG1	6450091	2965	0.588	0.0064	No
15	CDC2L2	1400671 5290168	3108	0.534	0.0037	No
16	HOXC6	3850133 4920736	3150	0.518	0.0064	No
17	PLRG1	4480735	3265	0.474	0.0046	No
18	TBXAS1	5050053 6900286	3321	0.452	0.0059	No
19	RNF4	580286 1400152	3407	0.426	0.0053	No
20	EN1	5360168 7050025	3485	0.400	0.0048	No
21	NSD1	4560519 4780672	3497	0.394	0.0079	No
22	AMMECR1	3800435	3506	0.392	0.0112	No
23	SESN3	110687	3741	0.310	0.0014	No
24	SSBP3	870717 1050377 7040551	3805	0.298	0.0008	No
25	HESX1	4050746	3822	0.293	0.0026	No
26	ERG	50154 1770739	3890	0.277	0.0016	No
27	NR2F1	4120528 360402	3939	0.267	0.0015	No
28	NCOR1	3710132	3941	0.267	0.0039	No
29	DSG4	3990605 6400736	3991	0.254	0.0037	No
30	A2BP1	2370390 4590593 5550014	4173	0.223	-0.0040	No
31	AOC2	520348 3120008	4183	0.221	-0.0025	No
32	HABP2	5360541 6350273	4260	0.210	-0.0046	No
33	FOXP2	3520561 4150372 4760524	4450	0.185	-0.0131	No
34	MID1	4070114 4760458	4475	0.182	-0.0127	No
35	ERMAP	780156	4682	0.160	-0.0224	No
36	ZRANB1	510373 4540278	4698	0.158	-0.0217	No
37	PDGFRA	2940332	5000	0.131	-0.0368	No
38	UBE2C	6130017	5106	0.125	-0.0413	No
39	OTP	2630070	5120	0.124	-0.0409	No
40	ANGPT2	1230458 5720706 6040605	5211	0.118	-0.0446	No
41	PLCB1	2570050 7100102	5457	0.104	-0.0569	No
42	ANXA10	4050750	5641	0.095	-0.0660	No
43	SLITRK3	5910041	5708	0.092	-0.0687	No
44	HOXC4	1940193	5727	0.091	-0.0688	No
45	MYF6	2690576	5893	0.083	-0.0770	No
46	CLOCK	1410070 2940292 3390075	5914	0.082	-0.0773	No
47	PPARGC1A	4670040	5917	0.082	-0.0766	No
48	MAN1C1	730133 870398 2340044	6066	0.076	-0.0839	No
49	GAD2	1400088	6352	0.066	-0.0988	No
50	CHCHD7	6620692	6385	0.064	-0.0999	No
51	HOXB8	3710450	6420	0.063	-0.1011	No
52	PRRX1	4120193 4480390	6431	0.063	-0.1011	No
53	HOXC10	5360170	6559	0.059	-0.1074	No
54	USF2	3870368 5570348 6940039	6603	0.058	-0.1092	No
55	LMO1	3170528	6745	0.054	-0.1163	No
56	FGFR2	4670601 5570402 6940377	6882	0.050	-0.1232	No
57	NHLH2	6200021	6928	0.049	-0.1252	No
58	PURA	3870156	7018	0.047	-0.1296	No
59	ODZ1	5050731	7097	0.045	-0.1334	No
60	PTPN22	1690647 7100239	7171	0.043	-0.1369	No
61	PHOX2B	5270075	7210	0.043	-0.1386	No
62	SLC26A7	1850398 3830377	7298	0.041	-0.1429	No
63	EYA1	1450278 5220390	7321	0.040	-0.1438	No
64	ESRRG	4010181	7424	0.038	-0.1489	No
65	SOX18	2320086	7475	0.037	-0.1513	No
66	ELP4	1230576	7796	0.031	-0.1683	No
67	SATB2	2470181	7951	0.028	-0.1764	No
68	IRX4	1980102	8260	0.023	-0.1929	No
69	NPR3	1580239	8413	0.020	-0.2009	No
70	RAB3C	5420072	8425	0.020	-0.2013	No
71	NEUROG1	380341	8575	0.017	-0.2092	No
72	MYT1	6770524	8683	0.016	-0.2149	No
73	LGI1	1850020	8826	0.013	-0.2225	No
74	ZFPM2	460072	9001	0.010	-0.2318	No
75	SDPR	3360292	9184	0.007	-0.2416	No
76	ELF4	4850193	9324	0.005	-0.2491	No
77	FGF7	5390484	9369	0.005	-0.2514	No
78	GNAT2	2450433	9411	0.004	-0.2536	No
79	LRRTM1	1690324	9434	0.004	-0.2547	No
80	BAI3	940692	9500	0.003	-0.2582	No
81	LHX6	2360731 3360397	9697	-0.000	-0.2689	No
82	HOXD8	3710156	9722	-0.000	-0.2701	No
83	C1QTNF7	2970619	9735	-0.001	-0.2708	No
84	CDKL5	2450070	10141	-0.006	-0.2927	No
85	FGF12	1740446 2360037	10149	-0.007	-0.2930	No
86	HSD17B2	3800541	10223	-0.008	-0.2969	No
87	BOC	5270348	10258	-0.008	-0.2986	No
88	P518	3610435	10467	-0.011	-0.3098	No
89	ARX	6900504	10560	-0.013	-0.3147	No
90	ACMSD	1450538	10652	-0.014	-0.3195	No
91	HSN2	610180	10695	-0.015	-0.3216	No
92	GABRB2	870059	10768	-0.016	-0.3254	No
93	WNT7A	1170315	10773	-0.016	-0.3254	No
94	KCNIP2	60088 1780324	10849	-0.017	-0.3293	No
95	PTPRD	520008 3120097	10881	-0.018	-0.3308	No
96	HOXA11	6980133	11193	-0.023	-0.3475	No
97	MLSTD1	3710184	11215	-0.023	-0.3484	No
98	NR4A3	2900021 5860095 5910039	11360	-0.026	-0.3559	No
99	SLC6A15	5290176 6040017	11562	-0.029	-0.3666	No
100	CREB5	2320368	11678	-0.032	-0.3725	No
101	COL11A2	5130341	11706	-0.032	-0.3737	No
102	TBX5	2900132 6370484	11750	-0.033	-0.3757	No
103	KCNJ16	4780273	11756	-0.033	-0.3756	No
104	NEUROD2	5290097	11801	-0.034	-0.3777	No
105	RARB	430139 1410138	12058	-0.040	-0.3912	No
106	GK2	6510736	12180	-0.043	-0.3974	No
107	CGA	630403	12441	-0.048	-0.4110	No
108	NEUROD6	4670731	12501	-0.050	-0.4137	No
109	FUT11	6040692	12557	-0.052	-0.4162	No
110	KLF15	4230164	12783	-0.059	-0.4278	No
111	DMP1	4760398	12802	-0.059	-0.4283	No
112	TCL1A	3420367	12873	-0.062	-0.4315	No
113	SV2A	1450039 5570685	12880	-0.062	-0.4312	No
114	RIMS2	670725	13122	-0.071	-0.4436	No
115	ALDH1A2	2320301	13599	-0.093	-0.4685	No
116	SLC6A4	2230372	13678	-0.098	-0.4718	No
117	ITGA7	1230739	13987	-0.120	-0.4874	No
118	PLCD4	6450040	14036	-0.123	-0.4889	No
119	PRDM13	1430022	14096	-0.128	-0.4909	No
120	POU3F4	870274	14322	-0.151	-0.5016	No
121	SOX5	2370576 2900167 3190128 5050528	14330	-0.152	-0.5006	No
122	PCSK2	360017 430528 5900619	14405	-0.159	-0.5031	No
123	APOBEC2	1690520	14430	-0.162	-0.5029	No
124	AP3M2	6370474	14601	-0.181	-0.5104	No
125	RHOBTB3	4010687	14969	-0.252	-0.5279	No
126	MDGA1	1170139	15106	-0.280	-0.5327	No
127	FHL1	60278	15358	-0.356	-0.5429	No
128	MYO10	3830576 5570092	15410	-0.372	-0.5422	No
129	ZIC4	1500082	15724	-0.510	-0.5544	No
130	SLC12A6	610278 1980035 5340671	15763	-0.528	-0.5515	No
131	PPP3CB	6020156	15807	-0.545	-0.5488	No
132	RAB5B	130397 1980273 6900731	16275	-0.819	-0.5664	Yes
133	KLHL5	3060484 6400292	16330	-0.856	-0.5613	Yes
134	MARCKS	7040450	16376	-0.885	-0.5555	Yes
135	FLI1	3990142	16561	-0.999	-0.5561	Yes
136	ZFP36L1	2510138 4120048	16675	-1.064	-0.5522	Yes
137	LARGE	6940068	16743	-1.118	-0.5454	Yes
138	FOXP3	940707 1850692	16933	-1.277	-0.5437	Yes
139	SOX4	2260091	17066	-1.434	-0.5374	Yes
140	KCNN3	6520600 6420138	17130	-1.518	-0.5266	Yes
141	CHD2	4070039	17205	-1.609	-0.5156	Yes
142	SLC20A1	6420014	17320	-1.735	-0.5055	Yes
143	NDUFA4	6860364	17373	-1.824	-0.4913	Yes
144	HNRPA0	2680048	17431	-1.910	-0.4765	Yes
145	RPA3	5700136	17721	-2.461	-0.4691	Yes
146	TRIM8	6130441	17757	-2.538	-0.4472	Yes
147	GATA3	6130068	17768	-2.566	-0.4238	Yes
148	ARID5A	2450133	17979	-3.029	-0.4068	Yes
149	HOXA7	5910152	18010	-3.106	-0.3794	Yes
150	DUSP6	5910286 7100070	18031	-3.173	-0.3508	Yes
151	TOB1	4150138	18066	-3.318	-0.3215	Yes
152	CLK2	510079 2630736	18091	-3.402	-0.2910	Yes
153	TLE4	1450064 1500519	18134	-3.567	-0.2599	Yes
154	SH3BGRL3	1850750	18381	-4.889	-0.2275	Yes
155	BCL6	940100	18397	-5.006	-0.1814	Yes
156	HSD11B1	450066 5550408	18421	-5.285	-0.1332	Yes
157	ETS2	360451	18547	-6.975	-0.0747	Yes
158	CCND2	5340167	18589	-8.378	0.0015	Yes