Details for gene set PENG_RAPAMYCIN

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	PENG_RAPAMYCIN_DN
Enrichment Score (ES)	0.6625339
Normalized Enrichment Score (NES)	1.8684075
Nominal p-value	0.0
FDR q-value	0.004974209
FWER p-Value	0.0050

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PFKM	1990156 5720168	4	9.552	0.0397	Yes
2	SLC7A5	3310746	33	6.535	0.0655	Yes
3	SLC29A1	2970379	38	6.165	0.0910	Yes
4	TCP1	2450100 5130524	76	5.073	0.1102	Yes
5	EIF3S9	2030068 2120044	81	5.001	0.1309	Yes
6	AATF	5220575	123	4.556	0.1477	Yes
7	CYC1	2850546	124	4.555	0.1667	Yes
8	FASN	430717	162	4.262	0.1825	Yes
9	UBE2M	2450215	179	4.166	0.1990	Yes
10	PA2G4	2030463	194	4.069	0.2153	Yes
11	C1QBP	3170452	207	4.008	0.2314	Yes
12	CCT6A	2350368	221	3.944	0.2471	Yes
13	RARS	380390	270	3.725	0.2601	Yes
14	PSMD14	5690593	297	3.628	0.2738	Yes
15	MRPL12	3120112	320	3.528	0.2874	Yes
16	GM2A	430095	321	3.527	0.3021	Yes
17	NARS	1660722	343	3.427	0.3153	Yes
18	ATF5	5670685	358	3.385	0.3287	Yes
19	GCN5L2	2340609	365	3.360	0.3424	Yes
20	CYCS	2030072	384	3.284	0.3551	Yes
21	NOL1	4570576 4920044	399	3.222	0.3678	Yes
22	UBE2L3	1690707 5900242	401	3.213	0.3812	Yes
23	DHCR24	840600 1050672 6290097	409	3.188	0.3941	Yes
24	BCS1L	5360102	439	3.094	0.4055	Yes
25	DDX21	6100446	460	3.031	0.4171	Yes
26	SRM	1850097 2480162	513	2.900	0.4264	Yes
27	IDH3A	460332	561	2.773	0.4354	Yes
28	ETF1	6770075	582	2.725	0.4457	Yes
29	DDX3X	2190020	681	2.564	0.4511	Yes
30	NOL5A	5570139	757	2.422	0.4571	Yes
31	NME1	770014	770	2.400	0.4665	Yes
32	CCT4	6380161	788	2.374	0.4755	Yes
33	USP10	2030736 2450333	804	2.347	0.4845	Yes
34	PSMD8	630142	846	2.266	0.4917	Yes
35	PSMC2	7040010	854	2.254	0.5008	Yes
36	NMT1	5810152	867	2.236	0.5095	Yes
37	SCD	2680441	909	2.162	0.5163	Yes
38	TIMM17A	130092	934	2.131	0.5239	Yes
39	TOMM40	6110017	939	2.111	0.5325	Yes
40	SLC3A2	5270358	994	2.046	0.5381	Yes
41	SF3A3	6660603	1024	1.998	0.5449	Yes
42	CCT2	1690113	1096	1.916	0.5490	Yes
43	HSPE1	3170438	1121	1.886	0.5556	Yes
44	HYOU1	3060465	1126	1.883	0.5633	Yes
45	CCT5	1050670	1142	1.862	0.5702	Yes
46	CCNC	3390750	1166	1.846	0.5767	Yes
47	PITPNB	5130039	1225	1.786	0.5810	Yes
48	RAE1	7050121	1237	1.778	0.5878	Yes
49	PSMB5	6290242	1272	1.738	0.5932	Yes
50	PGAM1	2570133	1304	1.712	0.5987	Yes
51	RTN4	50725 630647 870097 870184	1318	1.704	0.6051	Yes
52	CSE1L	3850086	1334	1.684	0.6114	Yes
53	ASNS	110368 7100687	1366	1.659	0.6166	Yes
54	EIF2B2	4290048	1464	1.570	0.6179	Yes
55	CTPS	70451 1740132	1539	1.499	0.6202	Yes
56	TFRC	4050551	1557	1.475	0.6254	Yes
57	EIF4G1	4070446	1619	1.417	0.6280	Yes
58	MRPS12	4210707 6110341	1620	1.416	0.6339	Yes
59	ETFA	50347 5690040 6370044	1626	1.412	0.6395	Yes
60	IDH3B	5690070	1749	1.306	0.6384	Yes
61	FKBP4	870035	1910	1.178	0.6346	Yes
62	GLO1	7040692	1924	1.169	0.6388	Yes
63	AK2	4590458 4760195 6110097	1965	1.135	0.6414	Yes
64	WBSCR22	3130070 4120551 5570433	2071	1.051	0.6401	Yes
65	HSPA8	2120315 1050132 6550746	2111	1.030	0.6423	Yes
66	YARS	70739	2128	1.018	0.6457	Yes
67	SNRPA1	1050735 6110131	2142	1.011	0.6492	Yes
68	PGK1	1570494 630300	2167	1.001	0.6521	Yes
69	PPP2R2A	2900014 5700575	2249	0.978	0.6518	Yes
70	EIF2B4	5270082	2258	0.974	0.6554	Yes
71	ATP5G3	4230551	2327	0.925	0.6556	Yes
72	SDHB	3120398 4780113 3710435	2417	0.872	0.6544	Yes
73	MORF4L2	6450133	2431	0.863	0.6573	Yes
74	PRDX3	1690035	2463	0.843	0.6591	Yes
75	TRIP13	6860341	2466	0.841	0.6625	Yes
76	AHSA1	2030520	2652	0.735	0.6556	No
77	NDUFS3	1690136 5340528	2678	0.720	0.6572	No
78	MLF2	1940176	2775	0.670	0.6548	No
79	PTBP1	4070736	2814	0.653	0.6555	No
80	HSPA5	5130671	2859	0.636	0.6558	No
81	TUBG1	3140204	2914	0.609	0.6554	No
82	INPP5E	6100619	2988	0.579	0.6538	No
83	ADRM1	670333 5690162	3087	0.543	0.6508	No
84	COX7B	2340504	3094	0.540	0.6527	No
85	NDUFA9	2260280	3148	0.519	0.6520	No
86	RBBP6	2320129	3246	0.481	0.6488	No
87	MAPKAPK3	630520	3289	0.462	0.6484	No
88	BMP1	380594 2940576 3710593	3320	0.452	0.6487	No
89	TARS	50440 1340086	3359	0.443	0.6485	No
90	GOT2	4570164 5220450	3364	0.442	0.6501	No
91	DAP3	1660528 2120039 5420593	3459	0.405	0.6467	No
92	EBP	2760292	3546	0.376	0.6436	No
93	CDC25A	3800184	3565	0.371	0.6442	No
94	KPNA3	7040088	3572	0.369	0.6454	No
95	ICT1	430138	3622	0.345	0.6442	No
96	ATP1B3	6040128	3779	0.301	0.6370	No
97	WNT10B	510050	3781	0.301	0.6382	No
98	SLC39A14	670300 1400093 1990711	4157	0.226	0.6188	No
99	AMD1	6290128	4209	0.217	0.6169	No
100	DNAJA1	1660010 2320358 6840136	4387	0.193	0.6082	No
101	EIF4G2	3800575 6860184	4422	0.188	0.6071	No
102	ACAT2	2680400 3610440	4495	0.180	0.6039	No
103	ARMET	5130670	4547	0.174	0.6019	No
104	EBNA1BP2	50369 1400433 6040019	4561	0.173	0.6019	No
105	VCP	5340168	4860	0.144	0.5864	No
106	ARF1	3840291	4955	0.135	0.5818	No
107	SLC1A5	670133 3140020	4983	0.133	0.5809	No
108	CTSC	2230739 4670408	5070	0.127	0.5768	No
109	GORASP2	2970059 4060309 7040706	5101	0.125	0.5757	No
110	PPIB	4280450	5119	0.124	0.5753	No
111	RAB1A	2370671	5886	0.083	0.5341	No
112	GCDH	2190324 4280347	6451	0.062	0.5038	No
113	PICALM	1940280	6457	0.062	0.5038	No
114	IDI1	1450736	6620	0.057	0.4952	No
115	TDG	2900358 2940079	7002	0.048	0.4748	No
116	SREBF1	4780333	7022	0.047	0.4739	No
117	GTF2A2	2230184	7496	0.037	0.4485	No
118	COPB2	610154	7905	0.029	0.4265	No
119	CAPZA2	110427 4590064	8058	0.026	0.4183	No
120	CALU	2680403 3520056 4610348 5720176 6130121	8083	0.026	0.4171	No
121	PTDSS1	6020215	8155	0.024	0.4134	No
122	HCCS	670397 3170341	8297	0.022	0.4058	No
123	NP	2630577 3120142 5670068 6290039	8368	0.021	0.4021	No
124	ATP6V0C	1780609	8632	0.016	0.3879	No
125	PTRF	2260204	8885	0.012	0.3743	No
126	RTCD1	7000041	8970	0.011	0.3698	No
127	PSMD5	3940139 4570041	9264	0.006	0.3540	No
128	IFI30	730309 2940500	9446	0.004	0.3442	No
129	WDR18	6020102	9555	0.002	0.3383	No
130	BTK	3130044	9841	-0.002	0.3229	No
131	PPIF	1740059	10274	-0.008	0.2995	No
132	ACVRL1	3290600	10276	-0.008	0.2995	No
133	BYSL	3170110	11054	-0.021	0.2574	No
134	PHB	2260739	11141	-0.022	0.2529	No
135	POLR2B	3780138	11796	-0.034	0.2176	No
136	CHUK	7050736	11886	-0.036	0.2129	No
137	P2RX5	5570427 6130435	12030	-0.039	0.2053	No
138	SYNCRIP	1690195 3140113 4670279	12153	-0.042	0.1989	No
139	MYCBP	4280528	12471	-0.049	0.1819	No
140	PAPOLA	4200286 4850112	12676	-0.055	0.1710	No
141	EEF1E1	4540711	12817	-0.060	0.1637	No
142	BCAP31	1190520	13260	-0.076	0.1401	No
143	RPS26	510139	13607	-0.093	0.1217	No
144	NUP98	2850465	13883	-0.112	0.1073	No
145	MMP15	5900717	14823	-0.219	0.0573	No
146	PSMD11	2340538 6510053	14886	-0.231	0.0549	No
147	GSPT1	5420050	15031	-0.263	0.0482	No
148	RNASEH1	3840575	15188	-0.301	0.0410	No
149	COX11	1580121	15243	-0.323	0.0394	No
150	EXTL3	540309 3130215 5860500	15268	-0.330	0.0395	No
151	S100A4	3780113	15765	-0.528	0.0148	No
152	ALDH4A1	2450450	16113	-0.718	-0.0010	No
153	CDK4	540075 4540600	16170	-0.750	-0.0009	No
154	EMP3	1500722 1570039	16298	-0.836	-0.0043	No
155	TIMM44	4670746 4730050	16306	-0.844	-0.0012	No
156	UCHL1	1230066	16391	-0.893	-0.0020	No
157	HSPA4	1050170 3450309	16403	-0.901	0.0012	No
158	PTPN1	2650056	16631	-1.030	-0.0068	No
159	SQLE	50180 940092	16720	-1.102	-0.0070	No
160	CHERP	1240594	16844	-1.201	-0.0087	No
161	RABGGTB	3120037	16930	-1.272	-0.0080	No
162	XPO6	3940019	16934	-1.277	-0.0028	No
163	JTB	6980400	17028	-1.377	-0.0021	No
164	LIMK2	2650446 4050164	17035	-1.382	0.0034	No
165	RAB14	6860139	17120	-1.499	0.0051	No
166	NXF1	1570377	17179	-1.567	0.0085	No
167	NPM3	3610300	17454	-1.959	0.0018	No
168	CD47	1850603	17731	-2.476	-0.0028	No
169	GTF3C1	1990368 4210037	17918	-2.892	-0.0008	No
170	XBP1	3840594	18340	-4.607	-0.0044	No
171	PIP5K1A	4560672	18343	-4.618	0.0148	No