Details for gene set HYPOXIA

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	HYPOXIA_REVIEW
Enrichment Score (ES)	0.6928072
Normalized Enrichment Score (NES)	1.7336907
Nominal p-value	0.0
FDR q-value	0.037806932
FWER p-Value	0.175

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ALDOA	6290672	47	5.798	0.0803	Yes
2	APEX1	3190519	96	4.789	0.1460	Yes
3	MIF	3710332	153	4.309	0.2046	Yes
4	PKM2	6520403 70500	158	4.287	0.2656	Yes
5	LDHA	2190594	205	4.012	0.3204	Yes
6	ENO1	5340128	397	3.225	0.3561	Yes
7	HMOX1	1740687	407	3.190	0.4012	Yes
8	PFKL	6200167	428	3.124	0.4447	Yes
9	COL5A1	2230050	502	2.943	0.4828	Yes
10	SPP1	2470609	527	2.862	0.5224	Yes
11	HK2	2640722	673	2.572	0.5513	Yes
12	CDKN1A	4050088 6400706	809	2.336	0.5774	Yes
13	TGM2	5360452	1160	1.848	0.5849	Yes
14	TFRC	4050551	1557	1.475	0.5846	Yes
15	PRPS1	6350129	1706	1.347	0.5959	Yes
16	TGFB3	1070041	1717	1.334	0.6144	Yes
17	CDKN1B	3800025 6450044	1755	1.301	0.6309	Yes
18	SLC2A3	1990377	1808	1.261	0.6461	Yes
19	TGFB1	1940162	1841	1.237	0.6621	Yes
20	PLAUR	5910280	2096	1.040	0.6632	Yes
21	PGK1	1570494 630300	2167	1.001	0.6738	Yes
22	ADM	4810121	2232	0.985	0.6844	Yes
23	NFKB1	5420358	2322	0.926	0.6928	Yes
24	BNIP3L	1940347	3141	0.521	0.6561	No
25	GAPDH	110022 430039 6220161	3637	0.342	0.6343	No
26	STC1	360161	3684	0.328	0.6365	No
27	FLT1	3830167 4920438	4046	0.244	0.6205	No
28	BHLHB2	7040603	4140	0.228	0.6188	No
29	CCL2	4760019	5083	0.126	0.5698	No
30	ANGPT2	1230458 5720706 6040605	5211	0.118	0.5646	No
31	TH	2100056	5482	0.103	0.5515	No
32	TGFA	1570332	5573	0.098	0.5481	No
33	EDN2	6760647	5793	0.087	0.5375	No
34	PFKP	70138 6760040 1170278	5877	0.084	0.5342	No
35	PTGS2	2510301 3170369	6259	0.069	0.5147	No
36	TEK	6350541	6484	0.061	0.5035	No
37	HGF	3360593	6794	0.052	0.4876	No
38	MMP13	510471 3940097	6809	0.052	0.4875	No
39	XRCC6	2850450 3870528	6943	0.049	0.4811	No
40	CP	2570484	7400	0.039	0.4570	No
41	IGFBP3	2370500	7562	0.036	0.4489	No
42	EPO	940180	7886	0.030	0.4319	No
43	EPAS1	5290156	8237	0.023	0.4133	No
44	VIM	20431	9366	0.005	0.3526	No
45	F3	2940180	9553	0.002	0.3426	No
46	TAGLN	6660280	9658	0.000	0.3370	No
47	EDN1	1770047	9776	-0.001	0.3307	No
48	LRP8	3610746 5360035	9894	-0.003	0.3244	No
49	ENPEP	130373	9918	-0.003	0.3232	No
50	XRCC5	7100286	10049	-0.005	0.3163	No
51	IL6	380133	10184	-0.007	0.3092	No
52	IGFBP1	5720435	10363	-0.010	0.2997	No
53	HIF1A	5670605	10446	-0.011	0.2955	No
54	PGF	4810593	10789	-0.016	0.2772	No
55	BNIP3	3140270	11424	-0.027	0.2434	No
56	IGFBP2	5220563	11721	-0.032	0.2280	No
57	FGF3	4230685	11757	-0.033	0.2265	No
58	P4HA1	2630692	12781	-0.059	0.1722	No
59	L1CAM	4850021	12795	-0.059	0.1724	No
60	HK1	4280402	13130	-0.071	0.1554	No
61	HDAC9	1990010 2260133	13144	-0.072	0.1557	No
62	JUN	840170	14564	-0.175	0.0817	No
63	FOS	1850315	15011	-0.260	0.0614	No
64	SAT1	4570463	15729	-0.511	0.0300	No
65	PDGFB	3060440 6370008	16166	-0.748	0.0172	No
66	IGF2	6510020	16291	-0.831	0.0223	No
67	DDIT3	780373	16604	-1.014	0.0200	No
68	SLC2A1	2100609	17119	-1.497	0.0137	No
69	TFF3	1580129	17470	-1.981	0.0231	No
70	CCNG2	3190095	17836	-2.706	0.0421	No