Details for gene set HSC_INTERMEDIATEPROGENITORS

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	HSC_INTERMEDIATEPROGENITORS_SHARED
Enrichment Score (ES)	0.65959144
Normalized Enrichment Score (NES)	1.726777
Nominal p-value	0.0025445293
FDR q-value	0.027246956
FWER p-Value	0.199

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SDC4	6370411	11	8.687	0.0645	Yes
2	C12ORF10	4120324 5270113	20	7.378	0.1193	Yes
3	ALDOA	6290672	47	5.798	0.1613	Yes
4	TBRG4	3610239 6370594	69	5.246	0.1995	Yes
5	NPC2	2350102	90	4.819	0.2345	Yes
6	APEX1	3190519	96	4.789	0.2701	Yes
7	GTF3A	2340451	106	4.687	0.3047	Yes
8	SDF2L1	4230446	143	4.423	0.3359	Yes
9	CHCHD4	2680075	151	4.320	0.3678	Yes
10	GALK1	840162	155	4.303	0.3999	Yes
11	MRPL12	3120112	320	3.528	0.4175	Yes
12	APIP	2480440 2810471	424	3.133	0.4354	Yes
13	ITGB4BP	1400541	456	3.045	0.4565	Yes
14	BID	4590592 6130008	476	2.990	0.4779	Yes
15	DDX52	2970411	509	2.917	0.4980	Yes
16	DBI	1090706	708	2.524	0.5062	Yes
17	COMMD10	3120451	948	2.103	0.5091	Yes
18	GFM1	6220711	1031	1.992	0.5196	Yes
19	KLHDC4	870288 5900092	1051	1.966	0.5333	Yes
20	EEF1B2	4850400 6130161	1078	1.937	0.5464	Yes
21	MAPRE2	1660435 5860403	1301	1.715	0.5472	Yes
22	POLR3E	380152	1338	1.679	0.5579	Yes
23	THOC5	4570047	1392	1.635	0.5673	Yes
24	MRPS35	2370603 4070551	1397	1.629	0.5792	Yes
25	GPT2	1850463	1402	1.627	0.5912	Yes
26	SSR2	5390180	1441	1.591	0.6011	Yes
27	TEX2	1740504 2480102 3060494	1448	1.587	0.6126	Yes
28	PES1	2470427	1642	1.402	0.6127	Yes
29	MRPS25	610441 870128 1410368	1672	1.374	0.6214	Yes
30	DDX20	3290348	1720	1.332	0.6289	Yes
31	GMPPA	520450 3120497	1764	1.297	0.6363	Yes
32	SURF6	3060451	2041	1.071	0.6294	Yes
33	HES6	540411 6550504	2065	1.057	0.6361	Yes
34	WDR34	6100215	2095	1.040	0.6423	Yes
35	PTCD2	1230088 1400605 3170576 6200609	2160	1.002	0.6464	Yes
36	CTSZ	1500687 1690364	2266	0.970	0.6480	Yes
37	LMAN2	430154	2277	0.961	0.6546	Yes
38	TXNDC4	450537	2386	0.890	0.6555	Yes
39	PLAC8	2900019	2533	0.801	0.6536	Yes
40	DHX37	1400309	2571	0.776	0.6574	Yes
41	RSU1	4850372	2634	0.742	0.6596	Yes
42	CPA3	610242 6380102	3040	0.558	0.6419	No
43	CFDP1	7000112	3113	0.532	0.6420	No
44	PCCA	3390400	3287	0.464	0.6361	No
45	MAPKAPK3	630520	3289	0.462	0.6395	No
46	TCN2	2810139	3418	0.423	0.6358	No
47	POLR3C	6940546	3432	0.416	0.6382	No
48	GCNT3	6290239	3563	0.371	0.6340	No
49	TNS3	6380242	3903	0.276	0.6178	No
50	CDADC1	3710201 4120064	3930	0.269	0.6184	No
51	AP3S2	2630411 5080053	4116	0.233	0.6101	No
52	SIGLEC5	5690398	4318	0.202	0.6008	No
53	CEBPZ	2970053 2680068	4941	0.137	0.5682	No
54	MDH1	6660358 6760731	5112	0.124	0.5600	No
55	C5ORF14	3780050	5277	0.114	0.5520	No
56	MAOA	1410039 4610324	5328	0.111	0.5501	No
57	PFKP	70138 6760040 1170278	5877	0.084	0.5212	No
58	ATP6AP2	4010059 5080315 7100347 6660484	5971	0.080	0.5168	No
59	GPR180	5390711	7137	0.044	0.4542	No
60	DTX4	4120433	7876	0.030	0.4146	No
61	PLAA	60706 6370369	8017	0.027	0.4073	No
62	NEBL	1850369 2480286	8347	0.021	0.3897	No
63	CITED2	5670114 5130088	9113	0.009	0.3484	No
64	RPN1	1240113	9669	0.000	0.3185	No
65	ELOVL3	6860050	10482	-0.011	0.2748	No
66	AS3MT	1570064 2350113	10734	-0.015	0.2613	No
67	NAT12	1780092 4730370	11075	-0.021	0.2431	No
68	GYS1	540154	11102	-0.021	0.2419	No
69	BET1	4010725	11155	-0.022	0.2393	No
70	AHCY	4230605	11518	-0.029	0.2199	No
71	STATIP1	4480022 6940097	13509	-0.088	0.1132	No
72	CUL5	450142	13653	-0.096	0.1062	No
73	NIPSNAP3B	630672 3710091 4540288 4780576	14022	-0.122	0.0872	No
74	D4ST1	1780671	14102	-0.128	0.0839	No
75	HDGF	5130114 5420066 6590152	14275	-0.146	0.0758	No
76	ATP6V1F	5420082	14588	-0.178	0.0603	No
77	SCARB1	510441 6770047	14676	-0.193	0.0570	No
78	SNUPN	5050131	14858	-0.226	0.0489	No
79	RASSF4	510372 1660673 6290040	15317	-0.343	0.0268	No
80	PAPSS2	870113	15511	-0.416	0.0195	No
81	SFXN4	60750 4560059	15621	-0.459	0.0170	No
82	NUP37	2370097 6370435 6380008	15676	-0.487	0.0178	No
83	ERCC8	1240300 6450372 6590180	15791	-0.537	0.0156	No
84	DYNLL1	5570113	16457	-0.935	-0.0133	No
85	BLOC1S2	1240215	16928	-1.272	-0.0291	No
86	PYCARD	2100750	17945	-2.968	-0.0617	No
87	SCIN	5420180	18445	-5.529	-0.0472	No
88	CASP7	4210156	18566	-7.530	0.0027	No