DatasetSet_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls
#wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls
#wtNotch_versus_normalThy_repos
Phenotypephenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in classnormalThy
GeneSetFLECHNER_KIDNEY_TRANSPLANT_REJECTION_UP
Enrichment Score (ES)-0.65249556
Normalized Enrichment Score (NES)-1.5722966
Nominal p-value0.0
FDR q-value0.25999296
FWER p-Value0.99
Table: GSEA Results Summary



Fig 1: Enrichment plot: FLECHNER_KIDNEY_TRANSPLANT_REJECTION_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ADAM1558907071034.7250.0265No
2LGALS91230079 2640181 29703984483.0640.0288No
3ACTB1660736 2030204 2060215 50500476652.5890.0347No
4CD1455706008872.2030.0377No
5ECGF1199068510172.0120.0444No
6FCGR3A384018411721.8390.0486No
7PTPRC130402 529014813161.7060.0525No
8LCP1428039714191.6080.0579No
9EIF2AK287023914361.5930.0678No
10PDE6D3130537 339001414991.5320.0749No
11PSMB8285070715601.4730.0816No
12C1QB591029216451.3970.0866No
13VSIG4158072221411.0120.0668No
14AIF1130332 522001724530.8480.0557No
15HCLS1710030926080.7560.0526No
16IL10RB290002528910.6220.0416No
17POLR2A522064730430.5560.0372No
18CUGBP26180121 684013930530.5530.0405No
19GAPDH110022 430039 622016136370.3420.0114No
20LY86223009343000.204-0.0230No
21USP9X130435 2370735 312033851150.124-0.0660No
22CD48157064752280.117-0.0713No
23LILRB4630465 294019363580.066-0.1317No
24GZMA339031564320.063-0.1352No
25AOAH539067265100.060-0.1390No
26FCER1G555002089840.010-0.2722No
27CD163248031591460.008-0.2809No
28IFI30730309 294050094460.004-0.2970No
29RHOH13018494670.003-0.2980No
30MOXD1245030110227-0.008-0.3389No
31DARC394005011159-0.022-0.3890No
32GBP25030113014-0.067-0.4885No
33COL6A32640717 4070064 539071713473-0.086-0.5126No
34APOC15900066 622040814422-0.162-0.5626No
35PRKCB1870019 313009214833-0.221-0.5832No
36TNFRSF1B3990035 586037214850-0.225-0.5826No
37TYROBP223002015203-0.310-0.5995No
38ALDOC450121 61042715289-0.336-0.6018No
39SFN6290301 751060815592-0.446-0.6150No
40CFD232073615762-0.526-0.6206No
41S100A4378011315765-0.528-0.6171No
42CD243067215811-0.546-0.6158No
43GLUL604025316173-0.752-0.6302No
44IFITM11690601 3120438 651007516588-1.009-0.6456Yes
45UBC1190129 1570161 5390079 6770097 710050016599-1.013-0.6393Yes
46RAB27A45001916627-1.025-0.6338Yes
47RAC2158054116776-1.151-0.6340Yes
48LAPTM5555037216941-1.289-0.6341Yes
49UBE2L660048 117068717068-1.435-0.6311Yes
50RASSF22480079 572054617340-1.774-0.6337Yes
51WARS2570717 329013917342-1.777-0.6217Yes
52PIM2840136 5720692 710057717393-1.853-0.6118Yes
53ITGB2638034817422-1.900-0.6004Yes
54DOCK2294004017655-2.342-0.5970Yes
55LCK336014217665-2.357-0.5815Yes
56LST1542037217746-2.516-0.5688Yes
57STAT16510204 659055317835-2.706-0.5551Yes
58SLA200007017846-2.731-0.5372Yes
59CXCR4459051917937-2.959-0.5219Yes
60CD3D281073917940-2.964-0.5019Yes
61MMP958033818017-3.118-0.4848Yes
62ISG20177075018198-3.830-0.4686Yes
63CD53555016218221-3.932-0.4431Yes
64LCN2251011218244-4.082-0.4165Yes
65CCND3380528 73050018358-4.702-0.3907Yes
66INPP5D345073118474-5.772-0.3577Yes
67IL4R237052018488-5.911-0.3183Yes
68RGS10234029218498-6.090-0.2775Yes
69S100A87011218510-6.250-0.2356Yes
70GMFG1230142 694024218512-6.275-0.1931Yes
71CD52591024218519-6.411-0.1499Yes
72IL10RA177016418530-6.591-0.1057Yes
73CORO1A3140609 3190020 319003718574-7.823-0.0549Yes
74CCL5371039718593-8.4220.0012Yes
Table: GSEA details [plain text format]



Fig 2: FLECHNER_KIDNEY_TRANSPLANT_REJECTION_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: FLECHNER_KIDNEY_TRANSPLANT_REJECTION_UP: Random ES distribution   
Gene set null distribution of ES for FLECHNER_KIDNEY_TRANSPLANT_REJECTION_UP