Details for gene set CHIARETTI_T_ALL

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	CHIARETTI_T_ALL_DIFF
Enrichment Score (ES)	-0.57224685
Normalized Enrichment Score (NES)	-1.57269
Nominal p-value	0.0
FDR q-value	0.27455464
FWER p-Value	0.99

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LGALS1	6450193	26	6.823	0.0201	No
2	CEBPB	2970019	35	6.268	0.0394	No
3	BUB1B	1450288	117	4.603	0.0495	No
4	PF4	6130332	210	3.991	0.0571	No
5	GNB2L1	5900520	215	3.968	0.0694	No
6	DDIT4	2570408	238	3.847	0.0803	No
7	NCF4	610164	264	3.740	0.0907	No
8	HIST1H4C	5570528	504	2.928	0.0869	No
9	NFIL3	4070377	569	2.751	0.0921	No
10	GCH1	670364 6550358	591	2.707	0.0995	No
11	CUL1	1990632	659	2.601	0.1041	No
12	IL7R	2060088 6380500	660	2.600	0.1123	No
13	ST3GAL1	2640368 5420301	684	2.557	0.1191	No
14	SPINK2	3990093	842	2.277	0.1177	No
15	SELENBP1	3850575	1069	1.949	0.1116	No
16	ITM2A	460576 4210086	1271	1.738	0.1061	No
17	HIST1H2BJ	2100551	1582	1.449	0.0938	No
18	G0S2	6550020	1751	1.303	0.0888	No
19	CDKN1B	3800025 6450044	1755	1.301	0.0928	No
20	ITPR3	4010632	1788	1.279	0.0950	No
21	SLC2A3	1990377	1808	1.261	0.0980	No
22	H1F0	1400408	1826	1.248	0.1010	No
23	CDKN2C	5050750 5130148	2033	1.076	0.0932	No
24	MX1	2690301 6840364	2073	1.051	0.0944	No
25	RASGRP1	1050148 4050632 6510671	2118	1.023	0.0952	No
26	HIST1H2BL	6380070	2126	1.019	0.0980	No
27	TAF6L	1850056	2149	1.008	0.1000	No
28	ADH5	6290100 6380711	2204	0.995	0.1002	No
29	NOTCH3	3060603	2257	0.974	0.1005	No
30	HES1	4810280	2317	0.931	0.1002	No
31	AQP3	2680692	2434	0.861	0.0966	No
32	PBX3	1300424 3710577 6180575	2438	0.857	0.0991	No
33	SC4MOL	3140524	2486	0.829	0.0992	No
34	CDC42	1240168 3440278 4480519 5290162	2599	0.760	0.0955	No
35	PRSS1	5860044	2636	0.740	0.0959	No
36	LMO4	3800746	2676	0.723	0.0960	No
37	MINPP1	870301 2230731 2940148 5860736 6110112	2781	0.667	0.0925	No
38	CCL3	2810092	2794	0.662	0.0939	No
39	ATP11B	4230100	2863	0.635	0.0922	No
40	RUNX3	3800546	2976	0.583	0.0880	No
41	MELK	130022 5220537	2984	0.579	0.0894	No
42	ATP9A	4780673 5390280	3065	0.550	0.0868	No
43	ACSL1	2900520	3071	0.548	0.0883	No
44	PPP1R16B	3520300	3106	0.536	0.0881	No
45	FTO	1690477	3143	0.520	0.0878	No
46	RAP2B	2640575 4120427	3147	0.519	0.0893	No
47	CDC7	4060546 4850041	3160	0.514	0.0902	No
48	IL12A	7100551	3220	0.492	0.0886	No
49	NKTR	380039 4230341	3508	0.390	0.0742	No
50	HNRPDL	1050102 1090181 5360471	3587	0.362	0.0711	No
51	STAM	3850008 4760441	3619	0.346	0.0705	No
52	WASF1	2060484	3673	0.331	0.0687	No
53	PRKCA	6400551	3738	0.311	0.0662	No
54	CTBP2	430309 3710079	3854	0.287	0.0608	No
55	BHLHB2	7040603	4140	0.228	0.0461	No
56	LDLR	5670386	4210	0.217	0.0430	No
57	SCG2	5670438 130671	4296	0.205	0.0390	No
58	CD69	380167 4730088	4356	0.198	0.0364	No
59	DUSP3	1240129 6840215	4555	0.173	0.0262	No
60	HOXA9	610494 4730040 5130601	4619	0.166	0.0233	No
61	GAS2	1340082	4668	0.162	0.0212	No
62	SERPINE2	2810390	4747	0.154	0.0175	No
63	QKI	5220093 6130044	5026	0.130	0.0028	No
64	GABPB2	6130450 7050735	5132	0.123	-0.0025	No
65	UBE2E3	2030347 3840471	5270	0.114	-0.0096	No
66	ANXA1	2320053	5526	0.100	-0.0232	No
67	CXCL2	610398	5670	0.093	-0.0306	No
68	LYN	6040600	5783	0.087	-0.0364	No
69	FGFR1	2190095 4570161	5852	0.085	-0.0399	No
70	RSBN1	7000487	6157	0.073	-0.0562	No
71	JARID2	6290538	6407	0.064	-0.0695	No
72	HOXA10	6110397 7100458	6421	0.063	-0.0700	No
73	TSHR	1190687 5270364	6424	0.063	-0.0699	No
74	PTGER4	6400670	6531	0.060	-0.0755	No
75	CAT	4280152	6543	0.059	-0.0759	No
76	ZBTB16	3290022	6757	0.053	-0.0873	No
77	SPRY2	5860184	6779	0.053	-0.0883	No
78	KLF10	4850056	6976	0.048	-0.0988	No
79	NPTX2	70021	7073	0.046	-0.1038	No
80	MTMR6	4810520	7074	0.046	-0.1037	No
81	MAL	4280487 4590239	7104	0.045	-0.1051	No
82	FRMD4B	6770736	7396	0.039	-0.1208	No
83	TTK	3800129	7453	0.038	-0.1238	No
84	TUBB2A	6940435	7470	0.037	-0.1245	No
85	ATF3	1940546	7704	0.033	-0.1371	No
86	GUCY1A3	110253 2640735 4070037	7869	0.030	-0.1459	No
87	MYC	380541 4670170	8103	0.025	-0.1585	No
88	PPBP	5130446	8236	0.023	-0.1656	No
89	ST18	5720537	8661	0.016	-0.1886	No
90	RCBTB2	1980746	8870	0.012	-0.1998	No
91	ALCAM	1050019	8961	0.011	-0.2047	No
92	PSPH	4050020	8999	0.010	-0.2066	No
93	TRH	5050576	9209	0.007	-0.2180	No
94	CXADR	6370068	9273	0.006	-0.2214	No
95	TIPARP	50397	9436	0.004	-0.2302	No
96	IFI30	730309 2940500	9446	0.004	-0.2307	No
97	SPOCK2	6650369	9521	0.003	-0.2347	No
98	GAB2	1410280 2340520 4280040	9538	0.002	-0.2355	No
99	IGJ	1170541	9609	0.001	-0.2393	No
100	SKAP2	6760500	9627	0.001	-0.2403	No
101	PLK2	6450152	9827	-0.002	-0.2511	No
102	CASP8	4850154	9926	-0.003	-0.2564	No
103	RGS2	1090736	10477	-0.011	-0.2862	No
104	MLC1	2650731 6350670	10858	-0.017	-0.3068	No
105	DDX3Y	1580278 4200519	10904	-0.018	-0.3092	No
106	HIST1H2AC	3130292	10922	-0.018	-0.3101	No
107	PTPRE	1660286 2940095	11266	-0.024	-0.3286	No
108	ARID5B	110403	11711	-0.032	-0.3527	No
109	SPON1	1660301	11895	-0.036	-0.3625	No
110	CRADD	6770520	11916	-0.037	-0.3635	No
111	IGLL1	5050500	11986	-0.038	-0.3671	No
112	FOSB	1940142	12064	-0.040	-0.3712	No
113	CD44	3990072 4850671 5860411 6860148 7050551	12081	-0.040	-0.3719	No
114	FLT3	2640487	12169	-0.042	-0.3765	No
115	HOXA5	6840026	12273	-0.045	-0.3819	No
116	PMAIP1	1400717 5360047 5900039	12878	-0.062	-0.4146	No
117	GARNL1	5670398	12895	-0.062	-0.4152	No
118	ADFP	1740102	12941	-0.064	-0.4175	No
119	SRPK2	6380341	12963	-0.065	-0.4184	No
120	ARHGEF10	3120593 6900673	12974	-0.065	-0.4188	No
121	RB1CC1	510494 7100072	13362	-0.081	-0.4395	No
122	ALDH1A2	2320301	13599	-0.093	-0.4521	No
123	PLAGL1	3190082 6200193	13641	-0.095	-0.4540	No
124	PCDH9	2100136	13654	-0.096	-0.4543	No
125	IDS	360619 5720161	13700	-0.099	-0.4565	No
126	IFRD1	4590215	13706	-0.100	-0.4564	No
127	AHR	4560671	13844	-0.110	-0.4635	No
128	ACTA1	840538	13888	-0.113	-0.4655	No
129	LAPTM4B	2060377 4150398	13907	-0.114	-0.4661	No
130	CR2	2850332 6450397	14041	-0.124	-0.4730	No
131	NID2	2320059	14051	-0.125	-0.4731	No
132	BIRC3	6550411	14074	-0.127	-0.4739	No
133	RNF144	4210332	14085	-0.128	-0.4740	No
134	CTSH	60524	14270	-0.146	-0.4835	No
135	ETV5	110017	14518	-0.170	-0.4964	No
136	IRF5	3360519	14561	-0.174	-0.4982	No
137	SWAP70	2810577 2850739 5130594	14851	-0.225	-0.5132	No
138	RGS1	4060347 4540181	14916	-0.238	-0.5159	No
139	FOS	1850315	15011	-0.260	-0.5202	No
140	PCTK2	5700673	15099	-0.279	-0.5240	No
141	SLC4A1	6290577	15293	-0.337	-0.5334	No
142	FHL1	60278	15358	-0.356	-0.5358	No
143	SNF1LK	6110403	15440	-0.381	-0.5390	No
144	TFPI	1400288 5550008	15449	-0.385	-0.5382	No
145	LMO2	5360450	15671	-0.483	-0.5487	No
146	S100A4	3780113	15765	-0.528	-0.5521	No
147	CD2	430672	15811	-0.546	-0.5528	No
148	PDLIM1	450100	15892	-0.595	-0.5553	No
149	MEF2A	2350041 3360128 6040180	16019	-0.660	-0.5601	No
150	RORA	380164 5220215	16034	-0.669	-0.5587	No
151	CD200	940725 5260647	16082	-0.700	-0.5591	No
152	HPGD	6770192	16184	-0.759	-0.5622	No
153	CLEC11A	2680193	16219	-0.781	-0.5616	No
154	EMP3	1500722 1570039	16298	-0.836	-0.5632	No
155	FXYD2	1400280 2350719 3520184 7040377	16316	-0.848	-0.5614	No
156	CSDA	2470092 3060053 4780056	16492	-0.958	-0.5679	No
157	PRDX2	6760095 4010619 5340577	16573	-1.003	-0.5691	Yes
158	USP1	2760541 5690438 6220673	16595	-1.011	-0.5670	Yes
159	LAT	3170025	16642	-1.039	-0.5663	Yes
160	MPO	2360176 2760440 5690176	16666	-1.056	-0.5642	Yes
161	LRMP	6290193	16726	-1.108	-0.5639	Yes
162	RYBP	60746	16750	-1.124	-0.5616	Yes
163	FYB	1690440	16760	-1.136	-0.5585	Yes
164	HHEX	2340575	16771	-1.146	-0.5555	Yes
165	IGFBP7	520411 3060110 5290152	16800	-1.169	-0.5533	Yes
166	IRF7	1570605	16917	-1.266	-0.5556	Yes
167	CD97	1090673 1690575	16970	-1.311	-0.5543	Yes
168	ARF6	3520026	16977	-1.316	-0.5505	Yes
169	SFPQ	4760110	17096	-1.466	-0.5523	Yes
170	STK17B	130091	17146	-1.532	-0.5501	Yes
171	BCL11A	6860369	17185	-1.577	-0.5472	Yes
172	SLC35D1	1740520	17353	-1.795	-0.5506	Yes
173	PIM2	840136 5720692 7100577	17393	-1.853	-0.5469	Yes
174	MGAT5	1770592 6940441	17485	-2.004	-0.5455	Yes
175	UGCG	3420053	17501	-2.035	-0.5399	Yes
176	PRDM2	780278 1940692	17534	-2.092	-0.5351	Yes
177	DUSP2	2370184	17558	-2.134	-0.5296	Yes
178	CLIC4	1230025 3190180 3290368 6450181	17616	-2.238	-0.5257	Yes
179	PTTG1IP	4670441	17628	-2.283	-0.5191	Yes
180	TAP1	4050047	17717	-2.447	-0.5161	Yes
181	ITGA6	3830129	17737	-2.489	-0.5093	Yes
182	SOCS2	4760692	17782	-2.591	-0.5036	Yes
183	STAT1	6510204 6590553	17835	-2.706	-0.4979	Yes
184	IL6ST	5890047	17936	-2.959	-0.4940	Yes
185	ARID5A	2450133	17979	-3.029	-0.4867	Yes
186	DUSP6	5910286 7100070	18031	-3.173	-0.4795	Yes
187	TOB1	4150138	18066	-3.318	-0.4709	Yes
188	TLE4	1450064 1500519	18134	-3.567	-0.4633	Yes
189	SAP30	5080735	18145	-3.631	-0.4524	Yes
190	TRIB2	4120605	18192	-3.802	-0.4429	Yes
191	ISG20	1770750	18198	-3.830	-0.4311	Yes
192	ALAS2	6550176	18254	-4.136	-0.4211	Yes
193	CRIP1	4590377	18268	-4.199	-0.4086	Yes
194	SELL	1190500	18294	-4.327	-0.3963	Yes
195	EPHB6	5860128	18388	-4.935	-0.3858	Yes
196	NFKBIE	580390 2190086	18391	-4.957	-0.3703	Yes
197	BCL6	940100	18397	-5.006	-0.3548	Yes
198	SLAMF1	580131 4920110	18408	-5.151	-0.3391	Yes
199	ARNTL	3170463	18456	-5.598	-0.3240	Yes
200	RAB6IP1	4150044	18463	-5.672	-0.3065	Yes
201	DUSP1	6860121	18476	-5.793	-0.2889	Yes
202	IL4R	2370520	18488	-5.911	-0.2708	Yes
203	S100A9	7050528	18495	-6.000	-0.2523	Yes
204	S100A8	70112	18510	-6.250	-0.2333	Yes
205	DNTT	670162	18516	-6.384	-0.2135	Yes
206	CD52	5910242	18519	-6.411	-0.1934	Yes
207	ARL4C	1190279	18534	-6.685	-0.1731	Yes
208	ETS2	360451	18547	-6.975	-0.1518	Yes
209	ITK	2230592	18551	-7.151	-0.1294	Yes
210	ANXA5	1050373	18556	-7.210	-0.1069	Yes
211	CCND2	5340167	18589	-8.378	-0.0823	Yes
212	CCL5	3710397	18593	-8.422	-0.0559	Yes
213	S100A10	6350010	18603	-8.937	-0.0282	Yes
214	ARMCX2	2320167	18610	-9.164	0.0003	Yes