Details for gene set NETPATH

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	NETPATH_TCR
Enrichment Score (ES)	-0.6217178
Normalized Enrichment Score (NES)	-1.6007829
Nominal p-value	0.0
FDR q-value	0.1002886
FWER p-Value	0.749

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CEBPB	2970019	35	6.268	0.0375	No
2	UNC119	360372	318	3.537	0.0445	No
3	NCL	2360463 4540279	534	2.844	0.0507	No
4	PIK3R2	1660193	656	2.603	0.0606	No
5	STAT5A	2680458	905	2.165	0.0608	No
6	PTK2	1780148	928	2.143	0.0731	No
7	GRB2	6650398	957	2.091	0.0847	No
8	DTX1	5900372	1220	1.795	0.0818	No
9	PTPRC	130402 5290148	1316	1.706	0.0874	No
10	JAK3	70347 3290008	1371	1.655	0.0949	No
11	YWHAQ	6760524	1422	1.603	0.1023	No
12	ABL1	1050593 2030050 4010114	2011	1.099	0.0774	No
13	ARHGEF6	4780164 6380450	2156	1.003	0.0759	No
14	DBNL	7100088	2437	0.858	0.0662	No
15	CDC42	1240168 3440278 4480519 5290162	2599	0.760	0.0623	No
16	HOMER3	3830279	2675	0.725	0.0628	No
17	SOS2	2060722	2853	0.638	0.0572	No
18	SHB	4920494	2904	0.615	0.0584	No
19	ZAP70	1410494 2260504	3430	0.417	0.0326	No
20	SH2D3C	3060014	3756	0.306	0.0170	No
21	ENAH	1690292 5700300	4552	0.174	-0.0249	No
22	DUSP3	1240129 6840215	4555	0.173	-0.0239	No
23	DLG1	2630091 6020286	4577	0.171	-0.0239	No
24	SOS1	7050338	4633	0.165	-0.0259	No
25	STK39	50692	4982	0.133	-0.0438	No
26	INSL3	4150092	5258	0.115	-0.0580	No
27	RIPK2	5050072 6290632	5335	0.111	-0.0614	No
28	NFATC2	70450 540097	5380	0.108	-0.0631	No
29	RAPGEF1	60040 4590670	5505	0.101	-0.0691	No
30	CREB1	1500717 2230358 3610600 6550601	5595	0.097	-0.0733	No
31	LYN	6040600	5783	0.087	-0.0829	No
32	RASA1	1240315	5862	0.084	-0.0866	No
33	GRAP2	7100441 1410647	6376	0.065	-0.1139	No
34	PTPRH	3870070	6804	0.052	-0.1366	No
35	PTPRJ	4010707	6828	0.051	-0.1375	No
36	PIK3R1	4730671	7165	0.043	-0.1554	No
37	PTPN22	1690647 7100239	7171	0.043	-0.1554	No
38	TUBB2A	6940435	7470	0.037	-0.1713	No
39	AKT1	5290746	7808	0.031	-0.1893	No
40	PTPN3	870369	8020	0.027	-0.2005	No
41	MAP2K1	840739	8442	0.019	-0.2231	No
42	TXK	2320338	8603	0.017	-0.2317	No
43	CBLB	3520465 4670348	8912	0.012	-0.2482	No
44	PTPN11	2230100 2470180 6100528	9168	0.008	-0.2620	No
45	PRKCQ	2260170 3870193	9201	0.007	-0.2636	No
46	GAB2	1410280 2340520 4280040	9538	0.002	-0.2818	No
47	SKAP2	6760500	9627	0.001	-0.2865	No
48	NCK1	6200575 6510050	9651	0.001	-0.2878	No
49	CD2AP	1940369	10862	-0.017	-0.3530	No
50	SRC	580132	11142	-0.022	-0.3679	No
51	RAP1A	1090025	11445	-0.027	-0.3841	No
52	ACP1	1990435	11842	-0.035	-0.4053	No
53	PLCG1	6020369	12826	-0.060	-0.4580	No
54	ARHGEF7	1690441	13544	-0.090	-0.4961	No
55	SYK	6940133	13785	-0.106	-0.5085	No
56	WIPF1	1170577	13929	-0.115	-0.5155	No
57	ABI1	2850152	14087	-0.128	-0.5231	No
58	SHC1	2900731 3170504 6520537	14198	-0.138	-0.5282	No
59	JUN	840170	14564	-0.175	-0.5468	No
60	PAG1	5910397	14768	-0.208	-0.5565	No
61	DNM2	50176 3170279	14772	-0.208	-0.5553	No
62	STAT5B	6200026	14806	-0.214	-0.5558	No
63	MAPK1	3190193 6200253	14867	-0.227	-0.5576	No
64	GRAP	1770195	14887	-0.231	-0.5572	No
65	FOS	1850315	15011	-0.260	-0.5622	No
66	PTPN12	2030309 6020725 6130746 6290609	15202	-0.309	-0.5705	No
67	CREBBP	5690035 7040050	15330	-0.349	-0.5752	No
68	VAV3	1050731 2450242 2680653	16036	-0.671	-0.6090	No
69	LCP2	2680066 6650707	16159	-0.742	-0.6110	No
70	FYN	2100468 4760520 4850687	16323	-0.850	-0.6144	Yes
71	VASP	7050500	16343	-0.863	-0.6100	Yes
72	MAP4K1	4060692	16352	-0.869	-0.6050	Yes
73	PTPN6	4230128	16387	-0.891	-0.6012	Yes
74	WAS	5270193	16461	-0.938	-0.5993	Yes
75	CRK	1230162 4780128	16534	-0.989	-0.5970	Yes
76	LAT	3170025	16642	-1.039	-0.5962	Yes
77	KHDRBS1	1240403 6040040	16724	-1.107	-0.5936	Yes
78	FYB	1690440	16760	-1.136	-0.5884	Yes
79	GIT2	6040039 6770181	16766	-1.141	-0.5815	Yes
80	ARHGDIB	4730433	16872	-1.224	-0.5795	Yes
81	DOCK2	2940040	17655	-2.342	-0.6070	Yes
82	LCK	3360142	17665	-2.357	-0.5927	Yes
83	SH3BP2	610131	17723	-2.463	-0.5803	Yes
84	SLA	2000070	17846	-2.731	-0.5697	Yes
85	TUBA4A	6900279	17881	-2.792	-0.5540	Yes
86	VAV1	6020487	17923	-2.904	-0.5380	Yes
87	CD3D	2810739	17940	-2.964	-0.5202	Yes
88	BCL10	2360397	18036	-3.190	-0.5053	Yes
89	CBL	6380068	18061	-3.305	-0.4858	Yes
90	SH2D2A	2970594	18110	-3.466	-0.4666	Yes
91	WASF2	4850592	18159	-3.677	-0.4461	Yes
92	CD4	1090010	18200	-3.836	-0.4242	Yes
93	NEDD9	1740373 4230053	18207	-3.858	-0.4003	Yes
94	CRKL	4050427	18209	-3.866	-0.3760	Yes
95	EVL	1740113	18214	-3.894	-0.3518	Yes
96	PSTPIP1	3190156	18311	-4.432	-0.3291	Yes
97	CARD11	70338	18353	-4.684	-0.3019	Yes
98	CD3E	3800056	18384	-4.904	-0.2727	Yes
99	DEF6	840593	18398	-5.008	-0.2419	Yes
100	CISH	840315	18477	-5.810	-0.2096	Yes
101	CD3G	2680288	18515	-6.372	-0.1716	Yes
102	PTK2B	4730411	18521	-6.456	-0.1313	Yes
103	CD247	3800725 5720136	18546	-6.975	-0.0888	Yes
104	ITK	2230592	18551	-7.151	-0.0440	Yes
105	CD5	6590338	18568	-7.559	0.0026	Yes