Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #wtNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#wtNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	V$USF_01
Enrichment Score (ES)	-0.5742401
Normalized Enrichment Score (NES)	-1.7287652
Nominal p-value	0.0
FDR q-value	0.09352711
FWER p-Value	0.067

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CHD4	5420059 6130338 6380717	406	1.424	-0.0059	No
2	HOXB4	540131	566	1.246	-0.0004	No
3	HMGN2	3140091	762	1.096	0.0015	No
4	ZFYVE26	6860152	810	1.060	0.0109	No
5	OPRS1	6130128 6290717	845	1.032	0.0208	No
6	TEF	1050050 3120397 4060487	879	1.008	0.0304	No
7	PLCG2	5720008	1101	0.899	0.0286	No
8	VPS16	430064 3390041 6860301	1113	0.893	0.0381	No
9	HSPBAP1	4060022	1188	0.849	0.0437	No
10	ZCCHC7	6510592	1300	0.793	0.0467	No
11	CCAR1	3190092	1344	0.777	0.0532	No
12	TFRC	4050551	1727	0.618	0.0395	No
13	ATF4	730441 1740195	1813	0.593	0.0416	No
14	RANBP1	430215 1090180	2036	0.519	0.0354	No
15	PRPS1	6350129	2061	0.513	0.0400	No
16	VPS33A	780113	2281	0.449	0.0332	No
17	SMYD4	2640403	2392	0.415	0.0319	No
18	GTF2H1	2570746 2650148	2403	0.412	0.0360	No
19	TSC1	1850672	2415	0.410	0.0401	No
20	ZNF318	5890091 6130021	2444	0.402	0.0431	No
21	MRPL27	2060131	2609	0.363	0.0383	No
22	BRDT	3940102	2703	0.342	0.0372	No
23	MYST3	5270500	2720	0.339	0.0402	No
24	DHX35	1230440	2811	0.322	0.0389	No
25	SGOL1	1980075 5220092 6020711	2993	0.288	0.0324	No
26	GTF2A1	4120138 4920524 5390110 1230397	3090	0.274	0.0303	No
27	ISGF3G	3190131 7100142	3293	0.240	0.0221	No
28	RGL1	1500097 6900450	3322	0.235	0.0232	No
29	ATP6V1A	6590242	3325	0.234	0.0257	No
30	DIRC2	2810494	3362	0.230	0.0264	No
31	SCYL1	5050717	3364	0.230	0.0290	No
32	EEF1B2	4850400 6130161	3476	0.215	0.0254	No
33	DUSP7	2940309	3538	0.207	0.0244	No
34	ARMET	5130670	3816	0.178	0.0114	No
35	MORF4L2	6450133	3851	0.175	0.0116	No
36	NFX1	450504	3877	0.172	0.0122	No
37	GATA5	430465	3902	0.169	0.0128	No
38	FEN1	1770541	4018	0.160	0.0084	No
39	SLC26A2	2360278	4065	0.156	0.0076	No
40	TESK2	6520524	4155	0.147	0.0045	No
41	TAF6L	1850056	4178	0.145	0.0049	No
42	NEUROD1	3060619	4179	0.145	0.0066	No
43	TOM1	940398 2190053	4236	0.141	0.0051	No
44	POLR3C	6940546	4305	0.136	0.0030	No
45	HOXB7	4540706 4610358	4493	0.123	-0.0058	No
46	COPZ1	6940100	4494	0.123	-0.0044	No
47	ESR2	6220138	4532	0.121	-0.0050	No
48	JMJD2C	3290341	4560	0.119	-0.0051	No
49	SLC36A1	5080242	4620	0.116	-0.0070	No
50	RBBP6	2320129	4707	0.111	-0.0104	No
51	HOXA9	610494 4730040 5130601	4718	0.111	-0.0097	No
52	NRIP3	1340372	4783	0.106	-0.0120	No
53	USP15	610592 3520504	5208	0.086	-0.0340	No
54	RAD9A	110300 1940632 3990390 6040014	5268	0.084	-0.0362	No
55	DVL2	6110162	5617	0.070	-0.0543	No
56	BMP4	380113	5651	0.069	-0.0553	No
57	HNRPH2	2630040 5720671	5769	0.065	-0.0609	No
58	BDNF	2940128 3520368	5794	0.064	-0.0615	No
59	RARG	6760136	5805	0.064	-0.0613	No
60	PPP1R3C	2640170	5849	0.062	-0.0630	No
61	SLC12A6	610278 1980035 5340671	5911	0.060	-0.0656	No
62	HOXA7	5910152	6346	0.049	-0.0886	No
63	GLA	4610364	6348	0.049	-0.0881	No
64	PHC3	4920332	6367	0.048	-0.0885	No
65	IRS4	430341 1190450	6513	0.045	-0.0958	No
66	SLC1A7	1990181	6578	0.043	-0.0988	No
67	MAX	5220021	6589	0.043	-0.0989	No
68	RNF146	1660735	6664	0.042	-0.1024	No
69	ELAVL3	2850014	6851	0.038	-0.1121	No
70	ARPC5	1740411 3450300	7402	0.027	-0.1416	No
71	BHLHB3	3450438	7842	0.020	-0.1651	No
72	HNRPD	4120021	7947	0.019	-0.1706	No
73	UBE2B	4780497	8000	0.018	-0.1732	No
74	KIAA1715	1190551	8014	0.018	-0.1737	No
75	EIF4G1	4070446	8585	0.009	-0.2045	No
76	ILF3	940722 3190647 6520110	8663	0.008	-0.2086	No
77	ODC1	5670168	8725	0.007	-0.2118	No
78	SEPT3	3830022 5290079	8771	0.006	-0.2142	No
79	EIF3S10	1190079 3840176	8954	0.004	-0.2240	No
80	HOXD10	6100039	9137	0.002	-0.2339	No
81	OPRD1	4280138	9221	0.001	-0.2384	No
82	HOXB5	2900538	9344	-0.001	-0.2450	No
83	AP1S2	780279 4280707	9455	-0.003	-0.2509	No
84	XPO1	540707	9544	-0.004	-0.2556	No
85	AKAP10	2630504 5910577	9553	-0.004	-0.2560	No
86	DNMT3A	4050068 4810717	9722	-0.006	-0.2650	No
87	HOXC5	1580017	9850	-0.008	-0.2718	No
88	PCDHA10	3830725	9989	-0.010	-0.2792	No
89	TRIM37	5270091	10314	-0.015	-0.2966	No
90	ADAM10	3780156	10357	-0.015	-0.2987	No
91	SNX5	1570021 6860609	10400	-0.016	-0.3008	No
92	TOM1L2	4810465	10496	-0.018	-0.3057	No
93	HOXA11	6980133	10835	-0.023	-0.3238	No
94	UTY	5890441	10985	-0.025	-0.3316	No
95	NDUFS1	2650253	11020	-0.026	-0.3332	No
96	FMR1	5050075	11131	-0.028	-0.3388	No
97	AKAP1	110148 1740735 2260019 7000563	11225	-0.029	-0.3435	No
98	PICALM	1940280	11250	-0.030	-0.3445	No
99	CPT1A	6350093	11365	-0.031	-0.3503	No
100	CGN	5890139 6370167 6400537	11504	-0.034	-0.3574	No
101	POGK	5290315	11670	-0.037	-0.3659	No
102	SET	6650286	11986	-0.043	-0.3825	No
103	SC5DL	6650390	12051	-0.045	-0.3855	No
104	NPM1	4730427	12115	-0.046	-0.3884	No
105	SUMF1	730050	12365	-0.053	-0.4013	No
106	FOXD3	6550156	12382	-0.053	-0.4016	No
107	FSHR	610041 7040121	12420	-0.054	-0.4030	No
108	SYT3	6380017	12429	-0.054	-0.4028	No
109	HOXA1	1190524 5420142	12476	-0.055	-0.4047	No
110	ETV1	70735 2940603 5080463	13625	-0.094	-0.4659	No
111	CUL5	450142	13798	-0.101	-0.4740	No
112	NPTX1	3710736	13962	-0.111	-0.4816	No
113	GGN	1410528 4210082 5290170	14011	-0.113	-0.4829	No
114	GNB2	2350053	14436	-0.142	-0.5043	No
115	HTATIP	5360739	14522	-0.149	-0.5072	No
116	SSR1	5890100	14850	-0.180	-0.5229	No
117	SIRT1	1190731	15314	-0.239	-0.5453	No
118	RAB3IL1	380685 5420176	15752	-0.323	-0.5654	No
119	GABARAP	1450286	15916	-0.360	-0.5701	Yes
120	EPC1	1570050 5290095 6900193	15993	-0.380	-0.5699	Yes
121	TNRC15	6760746	16000	-0.382	-0.5659	Yes
122	SLC31A2	1450577	16008	-0.384	-0.5620	Yes
123	MCM2	5050139	16009	-0.385	-0.5576	Yes
124	PPM1A	1170301 5900273	16115	-0.410	-0.5586	Yes
125	RAI14	770288 1660075	16156	-0.421	-0.5560	Yes
126	TOPORS	4060592	16243	-0.443	-0.5557	Yes
127	COMMD8	5890358	16277	-0.455	-0.5523	Yes
128	BRD2	1450300 5340484 6100605	16425	-0.502	-0.5546	Yes
129	AATF	5220575	16436	-0.505	-0.5494	Yes
130	RBBP4	6650528	16496	-0.524	-0.5467	Yes
131	RPA1	360452	16606	-0.563	-0.5462	Yes
132	EIF4E	1580403 70133 6380215	16676	-0.587	-0.5433	Yes
133	BAX	3830008	16778	-0.628	-0.5416	Yes
134	UBXD3	5050193	16804	-0.638	-0.5358	Yes
135	ATF7IP	2690176 6770021	16813	-0.642	-0.5289	Yes
136	RPL13A	2680519 5700142	16819	-0.644	-0.5219	Yes
137	MCOLN1	4480563	16835	-0.649	-0.5154	Yes
138	CLN3	780368	16896	-0.678	-0.5109	Yes
139	HPS3	6650348	16981	-0.711	-0.5074	Yes
140	DCTN4	3390010 5550170	16989	-0.716	-0.4997	Yes
141	IGF2R	1570402	17052	-0.749	-0.4946	Yes
142	RAB24	520601 4540739	17089	-0.761	-0.4879	Yes
143	CD164	3830594	17441	-0.949	-0.4962	Yes
144	TIMM8A	110279	17443	-0.952	-0.4854	Yes
145	UTX	2900017 6770452	17446	-0.954	-0.4747	Yes
146	CSRP2BP	4570717 5550333	17534	-0.996	-0.4682	Yes
147	GNAS	630441 1850373 4050152	17542	-0.997	-0.4573	Yes
148	NIT1	1230338 3940671	17552	-0.999	-0.4464	Yes
149	ALG1	2570112	17557	-0.999	-0.4353	Yes
150	GSK3B	5360348	17561	-1.000	-0.4241	Yes
151	SLC38A2	1470242 3800026	17587	-1.006	-0.4141	Yes
152	PTMA	5570148	17683	-1.061	-0.4072	Yes
153	DDX3X	2190020	17759	-1.115	-0.3987	Yes
154	COMMD3	2510259	17788	-1.142	-0.3873	Yes
155	HTF9C	3190048 4120132	17852	-1.188	-0.3772	Yes
156	GNA13	4590102	17876	-1.205	-0.3648	Yes
157	ALDH6A1	1770746	17943	-1.249	-0.3542	Yes
158	STMN1	1990717	18068	-1.364	-0.3455	Yes
159	AKAP12	1450739	18094	-1.383	-0.3312	Yes
160	OSGEP	5700239	18158	-1.465	-0.3180	Yes
161	UBE4B	780008 3610154	18163	-1.473	-0.3015	Yes
162	U2AF2	450600 4670128 5420292	18196	-1.513	-0.2861	Yes
163	BOK	1170373 5860446	18242	-1.565	-0.2708	Yes
164	MTCH2	3780603 6620215	18248	-1.571	-0.2533	Yes
165	APEX1	3190519	18290	-1.637	-0.2369	Yes
166	ATIC	4010593 6380463	18292	-1.642	-0.2184	Yes
167	GPX1	4150093	18354	-1.759	-0.2018	Yes
168	NUDC	4780025	18392	-1.882	-0.1824	Yes
169	LAMP1	2470524	18413	-1.920	-0.1618	Yes
170	STX6	4850750 6770278	18434	-1.963	-0.1406	Yes
171	EIF4B	5390563 5270577	18473	-2.090	-0.1190	Yes
172	HMOX1	1740687	18474	-2.093	-0.0952	Yes
173	KBTBD2	2320014	18488	-2.165	-0.0714	Yes
174	DUSP1	6860121	18491	-2.179	-0.0468	Yes
175	PFDN2	4230156	18537	-2.348	-0.0227	Yes
176	PER1	3290315	18540	-2.373	0.0041	Yes