Details for gene set CELL_CYCLE

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	wtNotch
GeneSet	CELL_CYCLE_PROCESS
Enrichment Score (ES)	-0.5426399
Normalized Enrichment Score (NES)	-1.69391
Nominal p-value	0.0
FDR q-value	0.31605914
FWER p-Value	0.651

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDK10	60164 1190717 3130128 3990044	93	3.142	0.0229	No
2	BCAT1	3290128 4050408	146	2.890	0.0457	No
3	CDK4	540075 4540600	515	2.120	0.0446	No
4	MAD2L2	1240358	828	1.784	0.0435	No
5	MSH5	1340019 4730333	961	1.651	0.0510	No
6	CHMP1A	5550441	965	1.647	0.0655	No
7	CDC25B	6940102	1097	1.538	0.0721	No
8	CHFR	3390050 6450300 6450736	1489	1.272	0.0622	No
9	MAP3K11	7000039	1593	1.210	0.0673	No
10	POLD1	4830026	1795	1.079	0.0660	No
11	TARDBP	870390 2350093	2164	0.917	0.0542	No
12	CDKN2C	5050750 5130148	2627	0.707	0.0355	No
13	STAG3	3830112	2683	0.682	0.0385	No
14	TGFB1	1940162	2867	0.610	0.0340	No
15	NUMA1	6520576	3038	0.548	0.0297	No
16	BOLL	6100743	3048	0.545	0.0340	No
17	E2F1	5360093	3237	0.483	0.0281	No
18	TOP3A	7000435	3266	0.476	0.0309	No
19	CDK6	4920253	3281	0.469	0.0343	No
20	RACGAP1	3990162 6620736	3408	0.437	0.0313	No
21	APBB1	2690338	3475	0.422	0.0315	No
22	CENTD2	60408 2510156 6100494	3504	0.415	0.0337	No
23	CDKN2D	6040035	3716	0.370	0.0255	No
24	DCTN2	540471 3780717	3928	0.333	0.0170	No
25	CUL2	4200278	4121	0.298	0.0093	No
26	RAD54L	2970041	4258	0.276	0.0044	No
27	TPD52L1	4590711 5570575	4391	0.260	-0.0005	No
28	RCC1	2480358	4488	0.246	-0.0035	No
29	ACVR1	6840671	4652	0.228	-0.0103	No
30	DUSP13	6400152	4807	0.211	-0.0168	No
31	ANAPC11	1780601	5028	0.189	-0.0270	No
32	CDKN2B	6020040	5044	0.187	-0.0262	No
33	ANLN	1780113 2470537 6840047	5049	0.187	-0.0247	No
34	UBE2C	6130017	5204	0.173	-0.0316	No
35	PLK1	1780369 2640121	5389	0.159	-0.0401	No
36	CDCA5	5670131	5416	0.156	-0.0401	No
37	TBRG4	3610239 6370594	5750	0.133	-0.0570	No
38	CENPE	2850022	5869	0.126	-0.0623	No
39	RAD1	4200551	5893	0.125	-0.0624	No
40	NEK6	3360687	6197	0.109	-0.0779	No
41	CUL5	450142	6527	0.094	-0.0948	No
42	DMC1	450341	6562	0.092	-0.0959	No
43	CLIP1	2850162 6770397	6789	0.084	-0.1074	No
44	PAFAH1B1	4230333 6420121 6450066	7219	0.070	-0.1300	No
45	NEK2	2120520	7723	0.056	-0.1567	No
46	KATNA1	6290048	7912	0.051	-0.1665	No
47	APBB2	5130403	7933	0.051	-0.1671	No
48	CETN1	6020056	7956	0.050	-0.1679	No
49	PRMT5	2760180 4590072	8107	0.047	-0.1756	No
50	TTN	2320161 4670056 6550026	8471	0.039	-0.1949	No
51	CDKN3	110520	8482	0.039	-0.1951	No
52	TIMELESS	3710315	8536	0.038	-0.1976	No
53	KIF11	5390139	9245	0.025	-0.2358	No
54	NPM1	4730427	9492	0.020	-0.2489	No
55	POLA1	4760541	9609	0.018	-0.2550	No
56	MSH4	3940068	9622	0.018	-0.2555	No
57	BUB1	5390270	10159	0.009	-0.2845	No
58	EREG	50519 4920129	10683	0.001	-0.3128	No
59	CCNA1	6290113	10793	-0.001	-0.3187	No
60	MDM4	4070504 4780008	11308	-0.010	-0.3465	No
61	KIF2C	6940082	11750	-0.018	-0.3702	No
62	CDKN1A	4050088 6400706	11801	-0.019	-0.3727	No
63	RAN	2260446 4590647	11827	-0.019	-0.3739	No
64	ANAPC10	870086 1170037 2260129	11843	-0.019	-0.3746	No
65	PAM	5290528	11865	-0.020	-0.3755	No
66	CENPF	5050088	11951	-0.022	-0.3799	No
67	SPO11	540288 4780239	12023	-0.023	-0.3836	No
68	TTK	3800129	12149	-0.026	-0.3901	No
69	RAD52	110093	12754	-0.041	-0.4225	No
70	EPGN	6980450	13283	-0.059	-0.4506	No
71	CHEK1	50167 1940300	13289	-0.059	-0.4503	No
72	NBN	730538 2470619 4780594	13322	-0.060	-0.4515	No
73	KIF15	610731 4070731 6520014	13416	-0.064	-0.4560	No
74	CDC23	3190593	13459	-0.066	-0.4577	No
75	PIM2	840136 5720692 7100577	13685	-0.076	-0.4692	No
76	SYCP1	2570010	13761	-0.080	-0.4726	No
77	DCTN3	6840131	13849	-0.085	-0.4765	No
78	ATM	3610110 4050524	13930	-0.090	-0.4800	No
79	TUBE1	2360079 6520685	13952	-0.091	-0.4804	No
80	FBXO5	2630551	13963	-0.092	-0.4801	No
81	PML	50093 2190435 2450402 3840082	13983	-0.093	-0.4803	No
82	USH1C	1570372 4230364	14222	-0.110	-0.4922	No
83	CDC25C	2570673 4760161 6520707	14375	-0.124	-0.4994	No
84	DDX11	6590671	14481	-0.133	-0.5039	No
85	CDKN1B	3800025 6450044	14572	-0.142	-0.5075	No
86	NPM2	6040139	14613	-0.148	-0.5083	No
87	SMC3	870546 1400411 5700039 6450577	14706	-0.158	-0.5119	No
88	TGFA	1570332	14796	-0.172	-0.5152	No
89	PIN1	2970408	14858	-0.180	-0.5169	No
90	GFI1B	4570131	15009	-0.204	-0.5232	No
91	RAD51L1	4010112 5860435	15068	-0.213	-0.5245	No
92	RAD51	6110450 6980280	15117	-0.225	-0.5251	No
93	ACVR1B	3610446 5570195	15345	-0.272	-0.5350	No
94	BRCA2	4280372	15357	-0.274	-0.5331	No
95	TUBG1	3140204	15374	-0.280	-0.5315	No
96	CDK2	130484 2260301 4010088 5050110	15400	-0.284	-0.5303	No
97	RAD17	5220739	15422	-0.288	-0.5289	No
98	LATS2	4480593 6020494	15450	-0.294	-0.5278	No
99	KIF22	1190368	15549	-0.321	-0.5302	No
100	GFI1	730180	15709	-0.371	-0.5356	No
101	NOLC1	2350195	15741	-0.381	-0.5339	No
102	PPP5C	3130047	15821	-0.409	-0.5345	No
103	XRCC2	4920706	15972	-0.458	-0.5386	Yes
104	SSSCA1	1240402 780309	16008	-0.469	-0.5363	Yes
105	CUL4A	1170088 2320008 2470278	16110	-0.504	-0.5373	Yes
106	EGF	5220154	16142	-0.515	-0.5344	Yes
107	SMC4	5910240	16168	-0.524	-0.5311	Yes
108	CIT	2370601	16181	-0.528	-0.5271	Yes
109	SUGT1	1690670	16186	-0.532	-0.5226	Yes
110	RAD50	4050184 6770746	16302	-0.577	-0.5237	Yes
111	MYH10	2640673	16399	-0.614	-0.5234	Yes
112	CCNA2	5290075	16440	-0.634	-0.5200	Yes
113	STMN1	1990717	16449	-0.636	-0.5148	Yes
114	CDC6	4570296 5360600	16457	-0.641	-0.5094	Yes
115	NDE1	1580242 3830097	16589	-0.703	-0.5103	Yes
116	MRE11A	3850601 4670332	16658	-0.748	-0.5073	Yes
117	DLG7	3120041	16674	-0.763	-0.5014	Yes
118	CDK2AP1	2340156	16688	-0.770	-0.4953	Yes
119	ABL1	1050593 2030050 4010114	16718	-0.789	-0.4898	Yes
120	BIRC5	110408 580014 1770632	16722	-0.790	-0.4830	Yes
121	RAD21	1990278	16835	-0.856	-0.4814	Yes
122	RAD51L3	2230609 2810286 3190008 3390053 4230168	16913	-0.906	-0.4776	Yes
123	KNTC1	430079	16964	-0.940	-0.4719	Yes
124	CDC16	1940706	17027	-0.980	-0.4666	Yes
125	CD28	1400739 4210093	17038	-0.983	-0.4584	Yes
126	PCBP4	6350722	17053	-0.991	-0.4503	Yes
127	TIPIN	1570301 2480113	17184	-1.048	-0.4481	Yes
128	CDKN2A	4670215 4760047	17236	-1.090	-0.4412	Yes
129	ZW10	2900735 3520687	17254	-1.103	-0.4323	Yes
130	SMC1A	3060600 5700148 5890113 6370154	17283	-1.130	-0.4238	Yes
131	AURKA	780537	17299	-1.140	-0.4145	Yes
132	HSPA2	6420592	17312	-1.149	-0.4049	Yes
133	KHDRBS1	1240403 6040040	17319	-1.152	-0.3950	Yes
134	LIG3	2940300	17350	-1.187	-0.3861	Yes
135	MPHOSPH6	5570164	17437	-1.259	-0.3796	Yes
136	CDKN1C	6520577	17535	-1.353	-0.3728	Yes
137	GSPT1	5420050	17593	-1.408	-0.3634	Yes
138	KIF23	5570112	17597	-1.409	-0.3511	Yes
139	PRC1	870092 5890204	17654	-1.472	-0.3411	Yes
140	ZWINT	6940670	17662	-1.481	-0.3283	Yes
141	CETN3	3170402	17668	-1.485	-0.3154	Yes
142	NDC80	4120465	17749	-1.583	-0.3057	Yes
143	PPP6C	2450670	17776	-1.613	-0.2927	Yes
144	PTPRC	130402 5290148	17828	-1.663	-0.2807	Yes
145	CUL1	1990632	17844	-1.677	-0.2667	Yes
146	CDC7	4060546 4850041	17891	-1.718	-0.2539	Yes
147	NUSAP1	940048 3120435	17902	-1.733	-0.2391	Yes
148	ANAPC5	730164 7100685	18019	-1.862	-0.2288	Yes
149	SKP2	360711 380093 4810368	18133	-2.012	-0.2171	Yes
150	CUL3	1850520	18170	-2.066	-0.2007	Yes
151	POLS	5890438	18192	-2.095	-0.1832	Yes
152	RB1	5900338	18226	-2.152	-0.1659	Yes
153	TPX2	6420324	18310	-2.306	-0.1499	Yes
154	MAD2L1	4480725	18343	-2.379	-0.1305	Yes
155	ANAPC4	4540338	18344	-2.384	-0.1094	Yes
156	POLE	6020538	18351	-2.398	-0.0884	Yes
157	BUB1B	1450288	18355	-2.413	-0.0671	Yes
158	KPNA2	3450114	18491	-2.781	-0.0498	Yes
159	AKAP8	4210026	18559	-3.171	-0.0252	Yes
160	NCAPH	6220435	18560	-3.183	0.0030	Yes