Details for gene set CELL_CYCLE

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	wtNotch
GeneSet	CELL_CYCLE_PHASE
Enrichment Score (ES)	-0.5275959
Normalized Enrichment Score (NES)	-1.6206
Nominal p-value	0.0
FDR q-value	0.27002713
FWER p-Value	0.956

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDK10	60164 1190717 3130128 3990044	93	3.142	0.0256	No
2	BCAT1	3290128 4050408	146	2.890	0.0510	No
3	CDK4	540075 4540600	515	2.120	0.0517	No
4	MAD2L2	1240358	828	1.784	0.0523	No
5	MSH5	1340019 4730333	961	1.651	0.0612	No
6	CHMP1A	5550441	965	1.647	0.0771	No
7	CDC25B	6940102	1097	1.538	0.0850	No
8	CHFR	3390050 6450300 6450736	1489	1.272	0.0763	No
9	MAP3K11	7000039	1593	1.210	0.0825	No
10	POLD1	4830026	1795	1.079	0.0821	No
11	TARDBP	870390 2350093	2164	0.917	0.0712	No
12	CDKN2C	5050750 5130148	2627	0.707	0.0530	No
13	STAG3	3830112	2683	0.682	0.0567	No
14	TGFB1	1940162	2867	0.610	0.0528	No
15	NUMA1	6520576	3038	0.548	0.0489	No
16	BOLL	6100743	3048	0.545	0.0537	No
17	E2F1	5360093	3237	0.483	0.0483	No
18	TOP3A	7000435	3266	0.476	0.0514	No
19	CDK6	4920253	3281	0.469	0.0552	No
20	APBB1	2690338	3475	0.422	0.0489	No
21	CDKN2D	6040035	3716	0.370	0.0395	No
22	DCTN2	540471 3780717	3928	0.333	0.0313	No
23	CUL2	4200278	4121	0.298	0.0238	No
24	RAD54L	2970041	4258	0.276	0.0192	No
25	TPD52L1	4590711 5570575	4391	0.260	0.0146	No
26	RCC1	2480358	4488	0.246	0.0118	No
27	ACVR1	6840671	4652	0.228	0.0052	No
28	DUSP13	6400152	4807	0.211	-0.0011	No
29	ANAPC11	1780601	5028	0.189	-0.0112	No
30	CDKN2B	6020040	5044	0.187	-0.0102	No
31	ANLN	1780113 2470537 6840047	5049	0.187	-0.0086	No
32	UBE2C	6130017	5204	0.173	-0.0152	No
33	PLK1	1780369 2640121	5389	0.159	-0.0236	No
34	CDCA5	5670131	5416	0.156	-0.0235	No
35	TBRG4	3610239 6370594	5750	0.133	-0.0403	No
36	CENPE	2850022	5869	0.126	-0.0454	No
37	RAD1	4200551	5893	0.125	-0.0454	No
38	NEK6	3360687	6197	0.109	-0.0608	No
39	CUL5	450142	6527	0.094	-0.0777	No
40	DMC1	450341	6562	0.092	-0.0786	No
41	CLIP1	2850162 6770397	6789	0.084	-0.0900	No
42	NEK2	2120520	7723	0.056	-0.1400	No
43	KATNA1	6290048	7912	0.051	-0.1497	No
44	APBB2	5130403	7933	0.051	-0.1502	No
45	CETN1	6020056	7956	0.050	-0.1509	No
46	PRMT5	2760180 4590072	8107	0.047	-0.1586	No
47	TTN	2320161 4670056 6550026	8471	0.039	-0.1779	No
48	CDKN3	110520	8482	0.039	-0.1780	No
49	TIMELESS	3710315	8536	0.038	-0.1805	No
50	KIF11	5390139	9245	0.025	-0.2186	No
51	POLA1	4760541	9609	0.018	-0.2381	No
52	MSH4	3940068	9622	0.018	-0.2386	No
53	BUB1	5390270	10159	0.009	-0.2675	No
54	EREG	50519 4920129	10683	0.001	-0.2958	No
55	CCNA1	6290113	10793	-0.001	-0.3017	No
56	KIF2C	6940082	11750	-0.018	-0.3533	No
57	CDKN1A	4050088 6400706	11801	-0.019	-0.3558	No
58	RAN	2260446 4590647	11827	-0.019	-0.3570	No
59	ANAPC10	870086 1170037 2260129	11843	-0.019	-0.3576	No
60	PAM	5290528	11865	-0.020	-0.3585	No
61	CENPF	5050088	11951	-0.022	-0.3629	No
62	SPO11	540288 4780239	12023	-0.023	-0.3665	No
63	TTK	3800129	12149	-0.026	-0.3731	No
64	RAD52	110093	12754	-0.041	-0.4054	No
65	EPGN	6980450	13283	-0.059	-0.4334	No
66	CHEK1	50167 1940300	13289	-0.059	-0.4331	No
67	NBN	730538 2470619 4780594	13322	-0.060	-0.4342	No
68	KIF15	610731 4070731 6520014	13416	-0.064	-0.4386	No
69	CDC23	3190593	13459	-0.066	-0.4402	No
70	PIM2	840136 5720692 7100577	13685	-0.076	-0.4517	No
71	SYCP1	2570010	13761	-0.080	-0.4550	No
72	DCTN3	6840131	13849	-0.085	-0.4588	No
73	ATM	3610110 4050524	13930	-0.090	-0.4623	No
74	PML	50093 2190435 2450402 3840082	13983	-0.093	-0.4642	No
75	USH1C	1570372 4230364	14222	-0.110	-0.4760	No
76	CDC25C	2570673 4760161 6520707	14375	-0.124	-0.4830	No
77	DDX11	6590671	14481	-0.133	-0.4874	No
78	CDKN1B	3800025 6450044	14572	-0.142	-0.4909	No
79	NPM2	6040139	14613	-0.148	-0.4916	No
80	SMC3	870546 1400411 5700039 6450577	14706	-0.158	-0.4951	No
81	TGFA	1570332	14796	-0.172	-0.4982	No
82	PIN1	2970408	14858	-0.180	-0.4998	No
83	GFI1B	4570131	15009	-0.204	-0.5059	No
84	RAD51L1	4010112 5860435	15068	-0.213	-0.5069	No
85	RAD51	6110450 6980280	15117	-0.225	-0.5073	No
86	ACVR1B	3610446 5570195	15345	-0.272	-0.5170	No
87	CDK2	130484 2260301 4010088 5050110	15400	-0.284	-0.5171	No
88	RAD17	5220739	15422	-0.288	-0.5155	No
89	LATS2	4480593 6020494	15450	-0.294	-0.5141	No
90	KIF22	1190368	15549	-0.321	-0.5162	No
91	GFI1	730180	15709	-0.371	-0.5212	No
92	NOLC1	2350195	15741	-0.381	-0.5192	No
93	PPP5C	3130047	15821	-0.409	-0.5195	No
94	XRCC2	4920706	15972	-0.458	-0.5231	Yes
95	SSSCA1	1240402 780309	16008	-0.469	-0.5204	Yes
96	CUL4A	1170088 2320008 2470278	16110	-0.504	-0.5210	Yes
97	EGF	5220154	16142	-0.515	-0.5177	Yes
98	SMC4	5910240	16168	-0.524	-0.5139	Yes
99	CIT	2370601	16181	-0.528	-0.5094	Yes
100	SUGT1	1690670	16186	-0.532	-0.5044	Yes
101	RAD50	4050184 6770746	16302	-0.577	-0.5050	Yes
102	CCNA2	5290075	16440	-0.634	-0.5063	Yes
103	CDC6	4570296 5360600	16457	-0.641	-0.5009	Yes
104	MRE11A	3850601 4670332	16658	-0.748	-0.5044	Yes
105	DLG7	3120041	16674	-0.763	-0.4978	Yes
106	CDK2AP1	2340156	16688	-0.770	-0.4910	Yes
107	ABL1	1050593 2030050 4010114	16718	-0.789	-0.4848	Yes
108	BIRC5	110408 580014 1770632	16722	-0.790	-0.4773	Yes
109	RAD21	1990278	16835	-0.856	-0.4750	Yes
110	RAD51L3	2230609 2810286 3190008 3390053 4230168	16913	-0.906	-0.4703	Yes
111	KNTC1	430079	16964	-0.940	-0.4639	Yes
112	CDC16	1940706	17027	-0.980	-0.4577	Yes
113	CD28	1400739 4210093	17038	-0.983	-0.4486	Yes
114	PCBP4	6350722	17053	-0.991	-0.4397	Yes
115	TIPIN	1570301 2480113	17184	-1.048	-0.4365	Yes
116	CDKN2A	4670215 4760047	17236	-1.090	-0.4287	Yes
117	ZW10	2900735 3520687	17254	-1.103	-0.4188	Yes
118	SMC1A	3060600 5700148 5890113 6370154	17283	-1.130	-0.4093	Yes
119	AURKA	780537	17299	-1.140	-0.3990	Yes
120	HSPA2	6420592	17312	-1.149	-0.3885	Yes
121	KHDRBS1	1240403 6040040	17319	-1.152	-0.3776	Yes
122	LIG3	2940300	17350	-1.187	-0.3676	Yes
123	MPHOSPH6	5570164	17437	-1.259	-0.3600	Yes
124	CDKN1C	6520577	17535	-1.353	-0.3520	Yes
125	GSPT1	5420050	17593	-1.408	-0.3414	Yes
126	ZWINT	6940670	17662	-1.481	-0.3306	Yes
127	NDC80	4120465	17749	-1.583	-0.3199	Yes
128	PPP6C	2450670	17776	-1.613	-0.3055	Yes
129	PTPRC	130402 5290148	17828	-1.663	-0.2921	Yes
130	CUL1	1990632	17844	-1.677	-0.2765	Yes
131	CDC7	4060546 4850041	17891	-1.718	-0.2623	Yes
132	NUSAP1	940048 3120435	17902	-1.733	-0.2459	Yes
133	ANAPC5	730164 7100685	18019	-1.862	-0.2340	Yes
134	SKP2	360711 380093 4810368	18133	-2.012	-0.2205	Yes
135	CUL3	1850520	18170	-2.066	-0.2023	Yes
136	RB1	5900338	18226	-2.152	-0.1843	Yes
137	TPX2	6420324	18310	-2.306	-0.1663	Yes
138	MAD2L1	4480725	18343	-2.379	-0.1448	Yes
139	ANAPC4	4540338	18344	-2.384	-0.1216	Yes
140	POLE	6020538	18351	-2.398	-0.0985	Yes
141	BUB1B	1450288	18355	-2.413	-0.0751	Yes
142	KPNA2	3450114	18491	-2.781	-0.0553	Yes
143	AKAP8	4210026	18559	-3.171	-0.0280	Yes
144	NCAPH	6220435	18560	-3.183	0.0030	Yes