Details for gene set JECHLINGER_EMT

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	truncNotch
GeneSet	JECHLINGER_EMT_DN
Enrichment Score (ES)	0.65850484
Normalized Enrichment Score (NES)	1.6055105
Nominal p-value	0.0050167223
FDR q-value	0.15503244
FWER p-Value	0.96

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DUSP1	6860121	29	3.727	0.0897	Yes
2	ACTN4	3840301 4590390 7050132	33	3.637	0.1787	Yes
3	FLNA	5390193	62	3.307	0.2582	Yes
4	KLF2	6860270	104	3.049	0.3306	Yes
5	PADI2	2940092 6420136	117	2.975	0.4028	Yes
6	ARHGEF1	610347 4850603 6420672	319	2.412	0.4511	Yes
7	TGM2	5360452	503	2.131	0.4935	Yes
8	CTSH	60524	504	2.131	0.5457	Yes
9	EGR1	4610347	670	1.942	0.5844	Yes
10	TIAM1	5420288	1541	1.244	0.5680	Yes
11	MYH9	3120091 4850292	1686	1.154	0.5885	Yes
12	GRB7	2100471	2196	0.901	0.5832	Yes
13	VAMP8	380411 1190139	2233	0.888	0.6030	Yes
14	STAT5A	2680458	2347	0.833	0.6173	Yes
15	ITGB5	70129	2358	0.828	0.6370	Yes
16	CDH1	1940736	2391	0.809	0.6551	Yes
17	SGK	1400131 2480056	2647	0.698	0.6585	Yes
18	IRF6	840241 2640139 4050373 6840471	3985	0.323	0.5945	No
19	NNT	540253 1170471 5550092 6760397	4822	0.209	0.5546	No
20	HMMR	5720315 6380168	5531	0.148	0.5201	No
21	CTGF	4540577	5729	0.135	0.5128	No
22	FBP2	1580193	6205	0.109	0.4899	No
23	ATF3	1940546	6450	0.097	0.4791	No
24	RARA	4050161	10511	0.003	0.2607	No
25	PKP1	1500433	10919	-0.003	0.2388	No
26	SERPINB5	6940050	10943	-0.004	0.2377	No
27	TACSTD1	3780025	11131	-0.007	0.2278	No
28	KITLG	2120047 6220300	11623	-0.015	0.2017	No
29	THBS1	4560494 430288	12677	-0.039	0.1460	No
30	F3	2940180	12685	-0.039	0.1466	No
31	FOSB	1940142	13018	-0.049	0.1299	No
32	EGR2	3800403	13438	-0.065	0.1089	No
33	NUMB	2450735 3800253 6350040	13660	-0.075	0.0989	No
34	AMD1	6290128	14974	-0.198	0.0330	No
35	TGFB3	1070041	15914	-0.438	-0.0068	No
36	JUP	2510671	15925	-0.443	0.0035	No
37	TIMP3	1450504 1980270	15927	-0.443	0.0143	No
38	ITPR1	3450519	17678	-1.492	-0.0433	No
39	ATP1A1	5670451	17777	-1.613	-0.0091	No
40	BCL6	940100	18261	-2.213	0.0191	No